Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC110994.2-201ENST00000635481 492 ntBASIC1.19□□□□□ -2.22
CXCL1P09341 AC087821.2-201ENST00000637086 450 ntBASIC1.19□□□□□ -2.22
CXCL1P09341 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.19□□□□□ -2.22
CXCL1P09341 Z98749.2-208ENST00000381646 500 ntBASIC1.18□□□□□ -2.22
CXCL1P09341 SNORA3.2-201ENST00000408221 125 ntBASIC1.18□□□□□ -2.22
CXCL1P09341 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.18□□□□□ -2.22
CXCL1P09341 EIF4EP2-201ENST00000422816 654 ntBASIC1.18□□□□□ -2.22
CXCL1P09341 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.18□□□□□ -2.22
CXCL1P09341 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.18□□□□□ -2.22
CXCL1P09341 RPL7P34-201ENST00000433316 712 ntBASIC1.18□□□□□ -2.22
CXCL1P09341 NANOGP2-201ENST00000435391 727 ntBASIC1.18□□□□□ -2.22
CXCL1P09341 PTGES3P1-201ENST00000439531 483 ntBASIC1.18□□□□□ -2.22
CXCL1P09341 OFD1P3Y-201ENST00000453312 783 ntBASIC1.18□□□□□ -2.22
CXCL1P09341 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.18□□□□□ -2.22
CXCL1P09341 RPS29P23-201ENST00000458635 123 ntBASIC1.18□□□□□ -2.22
CXCL1P09341 RNU1-98P-201ENST00000458992 160 ntBASIC1.18□□□□□ -2.22
CXCL1P09341 XACT-201ENST00000468762 497 ntTSL 5 BASIC1.18□□□□□ -2.22
CXCL1P09341 RPS15AP17-201ENST00000470598 390 ntBASIC1.18□□□□□ -2.22
CXCL1P09341 AC092902.1-201ENST00000486999 259 ntBASIC1.18□□□□□ -2.22
CXCL1P09341 AC008837.1-201ENST00000511513 412 ntBASIC1.18□□□□□ -2.22
CXCL1P09341 AC008549.1-201ENST00000512900 643 ntBASIC1.18□□□□□ -2.22
CXCL1P09341 SNORA48.11-201ENST00000517015 89 ntBASIC1.18□□□□□ -2.22
CXCL1P09341 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.18□□□□□ -2.22
CXCL1P09341 AC034114.1-201ENST00000520293 285 ntBASIC1.18□□□□□ -2.22
CXCL1P09341 AC090615.1-201ENST00000577519 154 ntBASIC1.18□□□□□ -2.22
CXCL1P09341 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.18□□□□□ -2.22
CXCL1P09341 MTCYBP22-201ENST00000603788 447 ntBASIC1.18□□□□□ -2.22
CXCL1P09341 AL035411.2-201ENST00000604022 421 ntBASIC1.18□□□□□ -2.22
CXCL1P09341 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.18□□□□□ -2.22
CXCL1P09341 AF129408.1-201ENST00000608767 431 ntBASIC1.18□□□□□ -2.22
CXCL1P09341 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.18□□□□□ -2.22
CXCL1P09341 AC079416.3-201ENST00000624479 549 ntBASIC1.18□□□□□ -2.22
CXCL1P09341 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.18□□□□□ -2.22
CXCL1P09341 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.18□□□□□ -2.22
CXCL1P09341 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CXCL1P09341 RNU6-353P-201ENST00000364266 108 ntBASIC1.17□□□□□ -2.22
CXCL1P09341 SNORA25B-201ENST00000365507 128 ntBASIC1.17□□□□□ -2.22
CXCL1P09341 MIR561-201ENST00000385216 97 ntBASIC1.17□□□□□ -2.22
CXCL1P09341 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
CXCL1P09341 RNU6-932P-201ENST00000391108 106 ntBASIC1.17□□□□□ -2.22
CXCL1P09341 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CXCL1P09341 SNORA11-201ENST00000408789 128 ntBASIC1.17□□□□□ -2.22
CXCL1P09341 USP9YP6-201ENST00000413550 854 ntBASIC1.17□□□□□ -2.22
CXCL1P09341 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.17□□□□□ -2.22
CXCL1P09341 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.17□□□□□ -2.22
CXCL1P09341 AL160275.3-201ENST00000423876 471 ntBASIC1.17□□□□□ -2.22
CXCL1P09341 ELOCP14-201ENST00000428070 331 ntBASIC1.17□□□□□ -2.22
CXCL1P09341 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.17□□□□□ -2.22
CXCL1P09341 ELOCP7-201ENST00000439968 331 ntBASIC1.17□□□□□ -2.22
CXCL1P09341 AL161788.1-201ENST00000441805 169 ntBASIC1.17□□□□□ -2.22
CXCL1P09341 AC002381.1-201ENST00000447049 280 ntBASIC1.17□□□□□ -2.22
CXCL1P09341 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC1.17□□□□□ -2.22
CXCL1P09341 AC108729.2-201ENST00000476543 840 ntBASIC1.17□□□□□ -2.22
CXCL1P09341 SNORA4.4-201ENST00000515921 135 ntBASIC1.17□□□□□ -2.22
CXCL1P09341 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.17□□□□□ -2.22
CXCL1P09341 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.17□□□□□ -2.22
CXCL1P09341 RANP3-201ENST00000530970 276 ntBASIC1.17□□□□□ -2.22
CXCL1P09341 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.17□□□□□ -2.22
CXCL1P09341 NDUFA5P6-201ENST00000542110 379 ntBASIC1.17□□□□□ -2.22
CXCL1P09341 ROCK1P1-201ENST00000573767 549 ntBASIC1.17□□□□□ -2.22
CXCL1P09341 AC026271.5-201ENST00000577873 130 ntBASIC1.17□□□□□ -2.22
CXCL1P09341 BNIP3P23-201ENST00000599655 511 ntBASIC1.17□□□□□ -2.22
CXCL1P09341 AC004805.2-201ENST00000605382 482 ntBASIC1.17□□□□□ -2.22
CXCL1P09341 DUSP12P1-201ENST00000612874 516 ntBASIC1.17□□□□□ -2.22
CXCL1P09341 AC107075.1-201ENST00000613695 314 ntBASIC1.17□□□□□ -2.22
CXCL1P09341 AC084768.2-201ENST00000622736 221 ntBASIC1.17□□□□□ -2.22
CXCL1P09341 AL138713.1-201ENST00000624026 2130 ntBASIC1.17□□□□□ -2.22
CXCL1P09341 Z99571.1-201ENST00000636677 394 ntBASIC1.17□□□□□ -2.22
CXCL1P09341 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.16□□□□□ -2.22
CXCL1P09341 Y_RNA.510-201ENST00000384511 114 ntBASIC1.16□□□□□ -2.22
CXCL1P09341 MIR583-201ENST00000384846 75 ntBASIC1.16□□□□□ -2.22
CXCL1P09341 LUZP4P1-201ENST00000415420 344 ntBASIC1.16□□□□□ -2.22
CXCL1P09341 AL449283.1-202ENST00000418249 604 ntBASIC1.16□□□□□ -2.22
CXCL1P09341 AC097463.2-201ENST00000421074 142 ntBASIC1.16□□□□□ -2.22
CXCL1P09341 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.16□□□□□ -2.22
CXCL1P09341 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.16□□□□□ -2.22
CXCL1P09341 MTCO1P53-201ENST00000441633 699 ntBASIC1.16□□□□□ -2.22
CXCL1P09341 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.16□□□□□ -2.22
CXCL1P09341 AC118469.1-201ENST00000442943 488 ntBASIC1.16□□□□□ -2.22
CXCL1P09341 AC244505.3-201ENST00000454598 187 ntBASIC1.16□□□□□ -2.22
CXCL1P09341 AC013267.1-201ENST00000458227 267 ntBASIC1.16□□□□□ -2.22
CXCL1P09341 AP001324.2-201ENST00000461163 319 ntBASIC1.16□□□□□ -2.22
CXCL1P09341 AC069528.1-202ENST00000482888 637 ntBASIC1.16□□□□□ -2.22
CXCL1P09341 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
CXCL1P09341 SMURF2P1-201ENST00000514992 481 ntBASIC1.16□□□□□ -2.22
CXCL1P09341 RNU6-250P-201ENST00000516958 103 ntBASIC1.16□□□□□ -2.22
CXCL1P09341 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC1.16□□□□□ -2.22
CXCL1P09341 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC1.16□□□□□ -2.22
CXCL1P09341 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CXCL1P09341 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.16□□□□□ -2.22
CXCL1P09341 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.16□□□□□ -2.22
CXCL1P09341 MIR4637-201ENST00000582405 84 ntBASIC1.16□□□□□ -2.22
CXCL1P09341 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CXCL1P09341 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.16□□□□□ -2.22
CXCL1P09341 MIR502-201ENST00000606349 86 ntBASIC1.16□□□□□ -2.22
CXCL1P09341 IGHVIII-44-202ENST00000636235 289 ntBASIC1.16□□□□□ -2.22
CXCL1P09341 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CXCL1P09341 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
CXCL1P09341 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
CXCL1P09341 AL356292.1-201ENST00000283110 373 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms