Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC093281.2-201ENST00000510153 597 ntBASIC1.62□□□□□ -2.15
HLA-DQB2P05538 AC008837.1-201ENST00000511513 412 ntBASIC1.62□□□□□ -2.15
HLA-DQB2P05538 AC027338.1-201ENST00000514840 825 ntBASIC1.62□□□□□ -2.15
HLA-DQB2P05538 MIR892C-201ENST00000516410 77 ntBASIC1.62□□□□□ -2.15
HLA-DQB2P05538 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.62□□□□□ -2.15
HLA-DQB2P05538 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.62□□□□□ -2.15
HLA-DQB2P05538 HIGD1AP17-201ENST00000554576 276 ntBASIC1.62□□□□□ -2.15
HLA-DQB2P05538 AL133241.1-201ENST00000556832 487 ntBASIC1.62□□□□□ -2.15
HLA-DQB2P05538 AC007151.1-201ENST00000572774 483 ntBASIC1.62□□□□□ -2.15
HLA-DQB2P05538 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.62□□□□□ -2.15
HLA-DQB2P05538 AC243773.3-201ENST00000613270 256 ntBASIC1.62□□□□□ -2.15
HLA-DQB2P05538 AC078880.5-201ENST00000617845 421 ntBASIC1.62□□□□□ -2.15
HLA-DQB2P05538 AL445264.1-201ENST00000621719 171 ntBASIC1.62□□□□□ -2.15
HLA-DQB2P05538 OR1S1-201ENST00000624470 978 ntBASIC1.62□□□□□ -2.15
HLA-DQB2P05538 AL163152.1-201ENST00000642001 374 ntBASIC1.62□□□□□ -2.15
HLA-DQB2P05538 AC103710.2-202ENST00000641454 2853 ntBASIC1.62□□□□□ -2.15
HLA-DQB2P05538 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.61□□□□□ -2.15
HLA-DQB2P05538 RNU6-1078P-201ENST00000364522 103 ntBASIC1.61□□□□□ -2.15
HLA-DQB2P05538 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.61□□□□□ -2.15
HLA-DQB2P05538 UBE2D3P3-201ENST00000426992 425 ntBASIC1.61□□□□□ -2.15
HLA-DQB2P05538 AL591806.2-201ENST00000433122 173 ntBASIC1.61□□□□□ -2.15
HLA-DQB2P05538 MTND4P15-201ENST00000437913 1033 ntBASIC1.61□□□□□ -2.15
HLA-DQB2P05538 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.61□□□□□ -2.15
HLA-DQB2P05538 AC124916.1-201ENST00000444020 547 ntBASIC1.61□□□□□ -2.15
HLA-DQB2P05538 AL136380.1-201ENST00000447970 162 ntBASIC1.61□□□□□ -2.15
HLA-DQB2P05538 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.61□□□□□ -2.15
HLA-DQB2P05538 PMCHL2-203ENST00000457791 237 ntBASIC1.61□□□□□ -2.15
HLA-DQB2P05538 snoU13.8-201ENST00000458890 104 ntBASIC1.61□□□□□ -2.15
HLA-DQB2P05538 HMGB3P17-201ENST00000504195 649 ntBASIC1.61□□□□□ -2.15
HLA-DQB2P05538 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
HLA-DQB2P05538 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.61□□□□□ -2.15
HLA-DQB2P05538 AC117522.2-201ENST00000510049 657 ntBASIC1.61□□□□□ -2.15
HLA-DQB2P05538 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.61□□□□□ -2.15
HLA-DQB2P05538 SNORA31.25-201ENST00000517242 134 ntBASIC1.61□□□□□ -2.15
HLA-DQB2P05538 MTCO3P15-201ENST00000526563 574 ntBASIC1.61□□□□□ -2.15
HLA-DQB2P05538 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.61□□□□□ -2.15
HLA-DQB2P05538 AP003497.1-201ENST00000528472 562 ntBASIC1.61□□□□□ -2.15
HLA-DQB2P05538 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.61□□□□□ -2.15
HLA-DQB2P05538 AC024619.4-201ENST00000580924 316 ntBASIC1.61□□□□□ -2.15
HLA-DQB2P05538 AC002545.1-201ENST00000592511 181 ntBASIC1.61□□□□□ -2.15
HLA-DQB2P05538 AL096840.1-201ENST00000603287 93 ntBASIC1.61□□□□□ -2.15
HLA-DQB2P05538 AL357094.1-201ENST00000603845 844 ntBASIC1.61□□□□□ -2.15
HLA-DQB2P05538 AC239868.4-201ENST00000608318 671 ntBASIC1.61□□□□□ -2.15
HLA-DQB2P05538 AL357080.1-201ENST00000617394 239 ntBASIC1.61□□□□□ -2.15
HLA-DQB2P05538 AP003400.5-201ENST00000624827 617 ntBASIC1.61□□□□□ -2.15
HLA-DQB2P05538 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.61□□□□□ -2.15
HLA-DQB2P05538 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
HLA-DQB2P05538 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.61□□□□□ -2.15
HLA-DQB2P05538 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HLA-DQB2P05538 RNU6-778P-201ENST00000363269 103 ntBASIC1.6□□□□□ -2.15
HLA-DQB2P05538 RNU6-234P-201ENST00000365229 104 ntBASIC1.6□□□□□ -2.15
HLA-DQB2P05538 AL079342.2-201ENST00000403367 482 ntBASIC1.6□□□□□ -2.15
HLA-DQB2P05538 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.6□□□□□ -2.15
HLA-DQB2P05538 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.6□□□□□ -2.15
HLA-DQB2P05538 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.6□□□□□ -2.15
HLA-DQB2P05538 BX510359.4-201ENST00000423750 193 ntBASIC1.6□□□□□ -2.15
HLA-DQB2P05538 BX119904.4-201ENST00000424402 301 ntBASIC1.6□□□□□ -2.15
HLA-DQB2P05538 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.6□□□□□ -2.15
HLA-DQB2P05538 RPS3AP44-201ENST00000425466 790 ntBASIC1.6□□□□□ -2.15
HLA-DQB2P05538 SNRPEP9-201ENST00000436794 238 ntBASIC1.6□□□□□ -2.15
HLA-DQB2P05538 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.6□□□□□ -2.15
HLA-DQB2P05538 HMGN2P23-201ENST00000456759 269 ntBASIC1.6□□□□□ -2.15
HLA-DQB2P05538 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.6□□□□□ -2.15
HLA-DQB2P05538 AC008481.1-201ENST00000463278 396 ntBASIC1.6□□□□□ -2.15
HLA-DQB2P05538 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.6□□□□□ -2.15
HLA-DQB2P05538 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.6□□□□□ -2.15
HLA-DQB2P05538 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.6□□□□□ -2.15
HLA-DQB2P05538 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.6□□□□□ -2.15
HLA-DQB2P05538 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
HLA-DQB2P05538 RN7SKP31-201ENST00000516354 278 ntBASIC1.6□□□□□ -2.15
HLA-DQB2P05538 RNU6-548P-201ENST00000517083 115 ntBASIC1.6□□□□□ -2.15
HLA-DQB2P05538 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.6□□□□□ -2.15
HLA-DQB2P05538 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.6□□□□□ -2.15
HLA-DQB2P05538 MIR4287-201ENST00000579398 78 ntBASIC1.6□□□□□ -2.15
HLA-DQB2P05538 AC105245.1-201ENST00000581934 244 ntBASIC1.6□□□□□ -2.15
HLA-DQB2P05538 AC007229.1-201ENST00000590455 412 ntBASIC1.6□□□□□ -2.15
HLA-DQB2P05538 AC069294.1-201ENST00000608397 350 ntBASIC1.6□□□□□ -2.15
HLA-DQB2P05538 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.6□□□□□ -2.15
HLA-DQB2P05538 AL354696.1-201ENST00000614652 497 ntBASIC1.6□□□□□ -2.15
HLA-DQB2P05538 AC010133.1-201ENST00000615809 842 ntBASIC1.6□□□□□ -2.15
HLA-DQB2P05538 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC1.6□□□□□ -2.15
HLA-DQB2P05538 AC011477.1-204ENST00000623416 1325 ntBASIC1.6□□□□□ -2.15
HLA-DQB2P05538 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
HLA-DQB2P05538 AP005901.5-201ENST00000545779 1796 ntBASIC1.59□□□□□ -2.15
HLA-DQB2P05538 CDR1-202ENST00000625883 1485 ntBASIC1.59□□□□□ -2.15
HLA-DQB2P05538 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.59□□□□□ -2.15
HLA-DQB2P05538 MIR1323-201ENST00000408090 73 ntBASIC1.59□□□□□ -2.15
HLA-DQB2P05538 U6atac.2-201ENST00000408644 118 ntBASIC1.59□□□□□ -2.15
HLA-DQB2P05538 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
HLA-DQB2P05538 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.59□□□□□ -2.15
HLA-DQB2P05538 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.59□□□□□ -2.15
HLA-DQB2P05538 MTCO2P1-201ENST00000424648 477 ntBASIC1.59□□□□□ -2.15
HLA-DQB2P05538 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.59□□□□□ -2.15
HLA-DQB2P05538 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.59□□□□□ -2.15
HLA-DQB2P05538 RPL35AP22-201ENST00000436855 335 ntBASIC1.59□□□□□ -2.15
HLA-DQB2P05538 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.59□□□□□ -2.15
HLA-DQB2P05538 FDX1P2-201ENST00000450769 375 ntBASIC1.59□□□□□ -2.15
HLA-DQB2P05538 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.59□□□□□ -2.15
HLA-DQB2P05538 AL160314.1-201ENST00000490836 438 ntBASIC1.59□□□□□ -2.15
HLA-DQB2P05538 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms