Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CD74P04233 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.97□□□□□ -2.09
CD74P04233 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.97□□□□□ -2.09
CD74P04233 BNIP3P2-201ENST00000441221 577 ntBASIC1.97□□□□□ -2.09
CD74P04233 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.97□□□□□ -2.09
CD74P04233 MTATP6P30-201ENST00000443540 664 ntBASIC1.97□□□□□ -2.09
CD74P04233 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.97□□□□□ -2.09
CD74P04233 OSTCP8-201ENST00000445117 448 ntBASIC1.97□□□□□ -2.09
CD74P04233 ELOCP30-201ENST00000447108 299 ntBASIC1.97□□□□□ -2.09
CD74P04233 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.97□□□□□ -2.09
CD74P04233 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.97□□□□□ -2.09
CD74P04233 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.97□□□□□ -2.09
CD74P04233 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.97□□□□□ -2.09
CD74P04233 AC004263.1-201ENST00000479327 332 ntBASIC1.97□□□□□ -2.09
CD74P04233 LINC00888-204ENST00000487386 421 ntBASIC1.97□□□□□ -2.09
CD74P04233 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CD74P04233 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.97□□□□□ -2.09
CD74P04233 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.97□□□□□ -2.09
CD74P04233 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.97□□□□□ -2.09
CD74P04233 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.97□□□□□ -2.09
CD74P04233 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
CD74P04233 AC110760.3-202ENST00000515177 371 ntBASIC1.97□□□□□ -2.09
CD74P04233 AP001372.4-201ENST00000524889 472 ntBASIC1.97□□□□□ -2.09
CD74P04233 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.97□□□□□ -2.09
CD74P04233 AP000907.2-201ENST00000530827 353 ntBASIC1.97□□□□□ -2.09
CD74P04233 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.97□□□□□ -2.09
CD74P04233 ELOCP32-201ENST00000548625 324 ntBASIC1.97□□□□□ -2.09
CD74P04233 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.97□□□□□ -2.09
CD74P04233 AL391261.3-201ENST00000557194 520 ntBASIC1.97□□□□□ -2.09
CD74P04233 AC105137.2-201ENST00000569073 466 ntBASIC1.97□□□□□ -2.09
CD74P04233 MIR4999-201ENST00000585029 91 ntBASIC1.97□□□□□ -2.09
CD74P04233 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.97□□□□□ -2.09
CD74P04233 AC021171.1-201ENST00000603137 706 ntBASIC1.97□□□□□ -2.09
CD74P04233 MTND4LP5-201ENST00000605152 292 ntBASIC1.97□□□□□ -2.09
CD74P04233 BCRP9-201ENST00000605312 388 ntBASIC1.97□□□□□ -2.09
CD74P04233 AC007619.2-201ENST00000605743 379 ntBASIC1.97□□□□□ -2.09
CD74P04233 SNORD14A-201ENST00000606526 91 ntBASIC1.97□□□□□ -2.09
CD74P04233 AC107214.2-201ENST00000608204 634 ntBASIC1.97□□□□□ -2.09
CD74P04233 AC004908.2-201ENST00000609090 574 ntBASIC1.97□□□□□ -2.09
CD74P04233 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.97□□□□□ -2.09
CD74P04233 AC021755.4-201ENST00000616620 456 ntBASIC1.97□□□□□ -2.09
CD74P04233 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.97□□□□□ -2.09
CD74P04233 AL031667.3-201ENST00000620124 655 ntBASIC1.97□□□□□ -2.09
CD74P04233 AC007490.1-201ENST00000624321 703 ntBASIC1.97□□□□□ -2.09
CD74P04233 AL160394.1-201ENST00000624765 724 ntBASIC1.97□□□□□ -2.09
CD74P04233 AL136313.1-201ENST00000624804 202 ntBASIC1.97□□□□□ -2.09
CD74P04233 MIR7157-201ENST00000635801 60 ntBASIC1.97□□□□□ -2.09
CD74P04233 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
CD74P04233 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CD74P04233 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
CD74P04233 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.96□□□□□ -2.1
CD74P04233 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CD74P04233 SNORA3A-201ENST00000364113 130 ntBASIC1.96□□□□□ -2.1
CD74P04233 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
CD74P04233 OR5H15-201ENST00000383696 930 ntBASIC1.96□□□□□ -2.1
CD74P04233 RNU6-1083P-201ENST00000384022 107 ntBASIC1.96□□□□□ -2.1
CD74P04233 RNU6-140P-201ENST00000384566 108 ntBASIC1.96□□□□□ -2.1
CD74P04233 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.96□□□□□ -2.1
CD74P04233 AL359511.1-201ENST00000402970 211 ntBASIC1.96□□□□□ -2.1
CD74P04233 RNU2-33P-201ENST00000410344 192 ntBASIC1.96□□□□□ -2.1
CD74P04233 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
CD74P04233 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.96□□□□□ -2.1
CD74P04233 ZNF863P-201ENST00000426746 417 ntBASIC1.96□□□□□ -2.1
CD74P04233 FCF1P1-201ENST00000432690 571 ntBASIC1.96□□□□□ -2.1
CD74P04233 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.96□□□□□ -2.1
CD74P04233 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.96□□□□□ -2.1
CD74P04233 UBE2FP3-201ENST00000436366 524 ntBASIC1.96□□□□□ -2.1
CD74P04233 AL591719.1-201ENST00000444669 744 ntBASIC1.96□□□□□ -2.1
CD74P04233 AL109933.2-201ENST00000452651 260 ntBASIC1.96□□□□□ -2.1
CD74P04233 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.96□□□□□ -2.1
CD74P04233 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.96□□□□□ -2.1
CD74P04233 RPL12P25-201ENST00000455592 494 ntBASIC1.96□□□□□ -2.1
CD74P04233 AC072039.1-201ENST00000477611 581 ntBASIC1.96□□□□□ -2.1
CD74P04233 AC055855.1-201ENST00000489563 579 ntBASIC1.96□□□□□ -2.1
CD74P04233 AC090255.1-201ENST00000495779 349 ntBASIC1.96□□□□□ -2.1
CD74P04233 SUMO2P6-201ENST00000505273 288 ntBASIC1.96□□□□□ -2.1
CD74P04233 RNA5SP320-201ENST00000516263 124 ntBASIC1.96□□□□□ -2.1
CD74P04233 RN7SKP265-201ENST00000516448 223 ntBASIC1.96□□□□□ -2.1
CD74P04233 MRPS36P3-201ENST00000519284 130 ntBASIC1.96□□□□□ -2.1
CD74P04233 MTATP6P15-201ENST00000527233 835 ntBASIC1.96□□□□□ -2.1
CD74P04233 AP003461.1-201ENST00000528866 78 ntBASIC1.96□□□□□ -2.1
CD74P04233 AC068587.4-201ENST00000533893 186 ntBASIC1.96□□□□□ -2.1
CD74P04233 AC023050.2-201ENST00000544968 387 ntBASIC1.96□□□□□ -2.1
CD74P04233 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.96□□□□□ -2.1
CD74P04233 AC090888.2-201ENST00000559765 1144 ntBASIC1.96□□□□□ -2.1
CD74P04233 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.96□□□□□ -2.1
CD74P04233 AC068790.3-201ENST00000602988 553 ntBASIC1.96□□□□□ -2.1
CD74P04233 AC013562.2-201ENST00000611632 603 ntBASIC1.96□□□□□ -2.1
CD74P04233 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.96□□□□□ -2.1
CD74P04233 AC097655.1-201ENST00000635075 318 ntBASIC1.96□□□□□ -2.1
CD74P04233 MTND1P37-201ENST00000636562 264 ntBASIC1.96□□□□□ -2.1
CD74P04233 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.96□□□□□ -2.1
CD74P04233 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
CD74P04233 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
CD74P04233 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.95□□□□□ -2.1
CD74P04233 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.95□□□□□ -2.1
CD74P04233 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CD74P04233 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
CD74P04233 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.95□□□□□ -2.1
CD74P04233 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms