Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.1□□□□□ -2.23
APOC1P02654 AC099842.1-201ENST00000619919 596 ntBASIC1.1□□□□□ -2.23
APOC1P02654 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.09□□□□□ -2.23
APOC1P02654 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.09□□□□□ -2.23
APOC1P02654 RSU1P2-202ENST00000437884 485 ntBASIC1.09□□□□□ -2.23
APOC1P02654 THAP5P1-201ENST00000439089 262 ntBASIC1.09□□□□□ -2.23
APOC1P02654 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.09□□□□□ -2.23
APOC1P02654 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.09□□□□□ -2.23
APOC1P02654 AC009474.2-201ENST00000451383 136 ntBASIC1.09□□□□□ -2.23
APOC1P02654 snoU13.23-201ENST00000458863 104 ntBASIC1.09□□□□□ -2.23
APOC1P02654 OR2A41P-201ENST00000473586 105 ntBASIC1.09□□□□□ -2.23
APOC1P02654 AL049874.1-201ENST00000489560 388 ntBASIC1.09□□□□□ -2.23
APOC1P02654 AP003033.1-201ENST00000527244 415 ntBASIC1.09□□□□□ -2.23
APOC1P02654 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.09□□□□□ -2.23
APOC1P02654 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.09□□□□□ -2.23
APOC1P02654 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.09□□□□□ -2.23
APOC1P02654 AC027104.1-201ENST00000563702 681 ntBASIC1.09□□□□□ -2.23
APOC1P02654 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.09□□□□□ -2.23
APOC1P02654 MIR4421-201ENST00000578133 69 ntBASIC1.09□□□□□ -2.23
APOC1P02654 MIR4303-201ENST00000581299 66 ntBASIC1.09□□□□□ -2.23
APOC1P02654 MIR4422-201ENST00000581938 83 ntBASIC1.09□□□□□ -2.23
APOC1P02654 MIR3660-201ENST00000584845 100 ntBASIC1.09□□□□□ -2.23
APOC1P02654 AP000238.1-201ENST00000608759 426 ntBASIC1.09□□□□□ -2.23
APOC1P02654 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.09□□□□□ -2.23
APOC1P02654 AC010889.1-201ENST00000566193 2666 ntBASIC1.09□□□□□ -2.24
APOC1P02654 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
APOC1P02654 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
APOC1P02654 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
APOC1P02654 SNORA22-201ENST00000383907 134 ntBASIC1.08□□□□□ -2.24
APOC1P02654 RNU6-217P-201ENST00000384164 104 ntBASIC1.08□□□□□ -2.24
APOC1P02654 U8.10-201ENST00000384260 133 ntBASIC1.08□□□□□ -2.24
APOC1P02654 SNORA22C-201ENST00000384614 134 ntBASIC1.08□□□□□ -2.24
APOC1P02654 MIR618-201ENST00000385287 98 ntBASIC1.08□□□□□ -2.24
APOC1P02654 HMGB1P17-201ENST00000403495 628 ntBASIC1.08□□□□□ -2.24
APOC1P02654 RNU2-43P-201ENST00000410306 190 ntBASIC1.08□□□□□ -2.24
APOC1P02654 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.08□□□□□ -2.24
APOC1P02654 MED14P1-201ENST00000430517 648 ntBASIC1.08□□□□□ -2.24
APOC1P02654 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.08□□□□□ -2.24
APOC1P02654 HMGB1P31-201ENST00000437242 427 ntBASIC1.08□□□□□ -2.24
APOC1P02654 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.08□□□□□ -2.24
APOC1P02654 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.08□□□□□ -2.24
APOC1P02654 HMGN3P1-201ENST00000453847 193 ntBASIC1.08□□□□□ -2.24
APOC1P02654 AP1S2P1-201ENST00000457344 379 ntBASIC1.08□□□□□ -2.24
APOC1P02654 AC132942.1-201ENST00000486753 483 ntBASIC1.08□□□□□ -2.24
APOC1P02654 SNORA31.22-201ENST00000517204 135 ntBASIC1.08□□□□□ -2.24
APOC1P02654 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.08□□□□□ -2.24
APOC1P02654 AC068338.1-201ENST00000565567 176 ntBASIC1.08□□□□□ -2.24
APOC1P02654 MIR4765-201ENST00000585007 77 ntBASIC1.08□□□□□ -2.24
APOC1P02654 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC1.08□□□□□ -2.24
APOC1P02654 AL671309.1-201ENST00000603750 544 ntBASIC1.08□□□□□ -2.24
APOC1P02654 AL670379.6-201ENST00000603753 252 ntBASIC1.08□□□□□ -2.24
APOC1P02654 MTCYBP22-201ENST00000603788 447 ntBASIC1.08□□□□□ -2.24
APOC1P02654 AL670379.11-201ENST00000604059 253 ntBASIC1.08□□□□□ -2.24
APOC1P02654 AL670379.10-201ENST00000604330 253 ntBASIC1.08□□□□□ -2.24
APOC1P02654 AC073413.2-201ENST00000604332 360 ntBASIC1.08□□□□□ -2.24
APOC1P02654 AC008162.1-201ENST00000604718 254 ntBASIC1.08□□□□□ -2.24
APOC1P02654 AL670379.1-201ENST00000604752 252 ntBASIC1.08□□□□□ -2.24
APOC1P02654 AL670379.2-201ENST00000604983 252 ntBASIC1.08□□□□□ -2.24
APOC1P02654 AL670379.5-201ENST00000605253 252 ntBASIC1.08□□□□□ -2.24
APOC1P02654 AL670379.4-201ENST00000605279 254 ntBASIC1.08□□□□□ -2.24
APOC1P02654 AL670379.12-201ENST00000605291 253 ntBASIC1.08□□□□□ -2.24
APOC1P02654 AL670379.8-201ENST00000605353 252 ntBASIC1.08□□□□□ -2.24
APOC1P02654 AL670379.9-201ENST00000605428 253 ntBASIC1.08□□□□□ -2.24
APOC1P02654 AL670379.7-201ENST00000605823 252 ntBASIC1.08□□□□□ -2.24
APOC1P02654 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.08□□□□□ -2.24
APOC1P02654 AL121652.1-201ENST00000608851 448 ntBASIC1.08□□□□□ -2.24
APOC1P02654 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.08□□□□□ -2.24
APOC1P02654 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.08□□□□□ -2.24
APOC1P02654 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
APOC1P02654 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.07□□□□□ -2.24
APOC1P02654 RNU6-457P-201ENST00000363999 107 ntBASIC1.07□□□□□ -2.24
APOC1P02654 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.07□□□□□ -2.24
APOC1P02654 RNU2-15P-201ENST00000410692 191 ntBASIC1.07□□□□□ -2.24
APOC1P02654 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.07□□□□□ -2.24
APOC1P02654 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.07□□□□□ -2.24
APOC1P02654 AL449283.1-202ENST00000418249 604 ntBASIC1.07□□□□□ -2.24
APOC1P02654 AC092047.1-201ENST00000424997 240 ntBASIC1.07□□□□□ -2.24
APOC1P02654 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.07□□□□□ -2.24
APOC1P02654 PIGFP3-201ENST00000441918 722 ntBASIC1.07□□□□□ -2.24
APOC1P02654 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.07□□□□□ -2.24
APOC1P02654 AC108210.2-201ENST00000503681 201 ntBASIC1.07□□□□□ -2.24
APOC1P02654 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.07□□□□□ -2.24
APOC1P02654 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.07□□□□□ -2.24
APOC1P02654 RPL21P5-201ENST00000554662 472 ntBASIC1.07□□□□□ -2.24
APOC1P02654 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.07□□□□□ -2.24
APOC1P02654 AC019288.1-201ENST00000557918 224 ntBASIC1.07□□□□□ -2.24
APOC1P02654 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.07□□□□□ -2.24
APOC1P02654 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.07□□□□□ -2.24
APOC1P02654 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.07□□□□□ -2.24
APOC1P02654 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.07□□□□□ -2.24
APOC1P02654 AC023043.2-201ENST00000589678 1026 ntBASIC1.07□□□□□ -2.24
APOC1P02654 AL022067.1-201ENST00000602426 454 ntBASIC1.07□□□□□ -2.24
APOC1P02654 AC007349.4-201ENST00000608114 532 ntBASIC1.07□□□□□ -2.24
APOC1P02654 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
APOC1P02654 AL445493.3-201ENST00000619568 477 ntBASIC1.07□□□□□ -2.24
APOC1P02654 AC083865.1-201ENST00000636634 831 ntBASIC1.07□□□□□ -2.24
APOC1P02654 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
APOC1P02654 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.06□□□□□ -2.24
APOC1P02654 AC005539.1-201ENST00000443768 1479 ntBASIC1.06□□□□□ -2.24
APOC1P02654 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms