Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC092013.1-201ENST00000438795 332 ntBASIC2.97□□□□□ -1.93
COL2A1P02458 RABEPKP1-201ENST00000440529 1026 ntBASIC2.97□□□□□ -1.93
COL2A1P02458 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.97□□□□□ -1.93
COL2A1P02458 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.97□□□□□ -1.93
COL2A1P02458 C1DP4-201ENST00000455429 424 ntBASIC2.97□□□□□ -1.93
COL2A1P02458 NF1P3-201ENST00000457709 450 ntBASIC2.97□□□□□ -1.93
COL2A1P02458 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.97□□□□□ -1.93
COL2A1P02458 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.97□□□□□ -1.93
COL2A1P02458 RNU7-27P-201ENST00000459281 62 ntBASIC2.97□□□□□ -1.93
COL2A1P02458 RPS20P20-201ENST00000460498 340 ntBASIC2.97□□□□□ -1.93
COL2A1P02458 RPL23AP11-201ENST00000475260 469 ntBASIC2.97□□□□□ -1.93
COL2A1P02458 RPS29P25-201ENST00000481709 171 ntBASIC2.97□□□□□ -1.93
COL2A1P02458 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.97□□□□□ -1.93
COL2A1P02458 AC006390.1-201ENST00000508068 283 ntBASIC2.97□□□□□ -1.93
COL2A1P02458 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.97□□□□□ -1.93
COL2A1P02458 AC078814.3-201ENST00000553036 491 ntBASIC2.97□□□□□ -1.93
COL2A1P02458 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.97□□□□□ -1.93
COL2A1P02458 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.97□□□□□ -1.93
COL2A1P02458 AC090751.1-201ENST00000566966 267 ntBASIC2.97□□□□□ -1.93
COL2A1P02458 SNORD39.2-201ENST00000579995 76 ntBASIC2.97□□□□□ -1.93
COL2A1P02458 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.97□□□□□ -1.93
COL2A1P02458 MIR5092-201ENST00000583139 88 ntBASIC2.97□□□□□ -1.93
COL2A1P02458 AC023813.4-201ENST00000607580 580 ntBASIC2.97□□□□□ -1.93
COL2A1P02458 AC108479.2-201ENST00000617314 601 ntBASIC2.97□□□□□ -1.93
COL2A1P02458 AC002550.2-201ENST00000621246 394 ntBASIC2.97□□□□□ -1.93
COL2A1P02458 AC090574.1-201ENST00000623186 233 ntBASIC2.97□□□□□ -1.93
COL2A1P02458 AP006248.2-201ENST00000623309 592 ntBASIC2.97□□□□□ -1.93
COL2A1P02458 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.97□□□□□ -1.93
COL2A1P02458 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
COL2A1P02458 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
COL2A1P02458 AC011155.1-201ENST00000316512 456 ntBASIC2.96□□□□□ -1.93
COL2A1P02458 RNU6-462P-201ENST00000362659 105 ntBASIC2.96□□□□□ -1.93
COL2A1P02458 RNU4-79P-201ENST00000362764 141 ntBASIC2.96□□□□□ -1.93
COL2A1P02458 RNU6-216P-201ENST00000363282 104 ntBASIC2.96□□□□□ -1.93
COL2A1P02458 SNORA63-201ENST00000363450 132 ntBASIC2.96□□□□□ -1.93
COL2A1P02458 Y_RNA.164-201ENST00000363709 102 ntBASIC2.96□□□□□ -1.93
COL2A1P02458 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.96□□□□□ -1.93
COL2A1P02458 ZNF90P2-204ENST00000419323 1075 ntBASIC2.96□□□□□ -1.93
COL2A1P02458 AL513185.2-201ENST00000425543 193 ntBASIC2.96□□□□□ -1.93
COL2A1P02458 RPL22P17-201ENST00000438729 315 ntBASIC2.96□□□□□ -1.93
COL2A1P02458 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.96□□□□□ -1.93
COL2A1P02458 NDUFS5P3-201ENST00000450668 321 ntBASIC2.96□□□□□ -1.93
COL2A1P02458 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
COL2A1P02458 RN7SL297P-201ENST00000483161 293 ntBASIC2.96□□□□□ -1.93
COL2A1P02458 RPL36AP51-201ENST00000487216 318 ntBASIC2.96□□□□□ -1.93
COL2A1P02458 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.96□□□□□ -1.93
COL2A1P02458 AC234781.5-201ENST00000508429 271 ntBASIC2.96□□□□□ -1.93
COL2A1P02458 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.96□□□□□ -1.93
COL2A1P02458 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.96□□□□□ -1.93
COL2A1P02458 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.96□□□□□ -1.93
COL2A1P02458 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.93
COL2A1P02458 Y_RNA.672-201ENST00000516289 104 ntBASIC2.96□□□□□ -1.93
COL2A1P02458 Y_RNA.693-201ENST00000516641 110 ntBASIC2.96□□□□□ -1.93
COL2A1P02458 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
COL2A1P02458 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.96□□□□□ -1.93
COL2A1P02458 AL389895.1-201ENST00000554127 252 ntBASIC2.96□□□□□ -1.93
COL2A1P02458 AL121821.2-201ENST00000556081 394 ntBASIC2.96□□□□□ -1.93
COL2A1P02458 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.96□□□□□ -1.93
COL2A1P02458 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.96□□□□□ -1.93
COL2A1P02458 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC2.96□□□□□ -1.93
COL2A1P02458 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.96□□□□□ -1.93
COL2A1P02458 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.96□□□□□ -1.93
COL2A1P02458 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.96□□□□□ -1.93
COL2A1P02458 AC012507.3-201ENST00000603556 477 ntBASIC2.96□□□□□ -1.93
COL2A1P02458 AC069304.2-201ENST00000605154 435 ntBASIC2.96□□□□□ -1.93
COL2A1P02458 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.96□□□□□ -1.93
COL2A1P02458 AP001521.1-201ENST00000609150 300 ntBASIC2.96□□□□□ -1.93
COL2A1P02458 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.96□□□□□ -1.94
COL2A1P02458 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
COL2A1P02458 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
COL2A1P02458 AC117529.2-201ENST00000512159 2068 ntBASIC2.96□□□□□ -1.94
COL2A1P02458 Y_RNA.279-201ENST00000364763 95 ntBASIC2.96□□□□□ -1.94
COL2A1P02458 SNORD81.2-201ENST00000365153 76 ntBASIC2.96□□□□□ -1.94
COL2A1P02458 Y_RNA.608-201ENST00000410647 95 ntBASIC2.96□□□□□ -1.94
COL2A1P02458 RNU4-53P-201ENST00000410828 140 ntBASIC2.96□□□□□ -1.94
COL2A1P02458 AC127391.1-201ENST00000411737 98 ntBASIC2.96□□□□□ -1.94
COL2A1P02458 RPS20P15-201ENST00000412792 311 ntBASIC2.96□□□□□ -1.94
COL2A1P02458 MTND2P23-201ENST00000422990 651 ntBASIC2.96□□□□□ -1.94
COL2A1P02458 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.96□□□□□ -1.94
COL2A1P02458 AL356320.1-201ENST00000429616 163 ntBASIC2.96□□□□□ -1.94
COL2A1P02458 AC244505.4-201ENST00000434905 287 ntBASIC2.96□□□□□ -1.94
COL2A1P02458 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.96□□□□□ -1.94
COL2A1P02458 SSXP5-201ENST00000443473 287 ntBASIC2.96□□□□□ -1.94
COL2A1P02458 RPL17P49-201ENST00000443728 411 ntBASIC2.96□□□□□ -1.94
COL2A1P02458 MTND4P19-201ENST00000446659 478 ntBASIC2.96□□□□□ -1.94
COL2A1P02458 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.96□□□□□ -1.94
COL2A1P02458 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.96□□□□□ -1.94
COL2A1P02458 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.96□□□□□ -1.94
COL2A1P02458 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.96□□□□□ -1.94
COL2A1P02458 RPL21P99-201ENST00000480369 423 ntBASIC2.96□□□□□ -1.94
COL2A1P02458 CKS1BP2-201ENST00000497342 240 ntBASIC2.96□□□□□ -1.94
COL2A1P02458 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.96□□□□□ -1.94
COL2A1P02458 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.96□□□□□ -1.94
COL2A1P02458 HMGN1P13-201ENST00000505795 138 ntBASIC2.96□□□□□ -1.94
COL2A1P02458 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.96□□□□□ -1.94
COL2A1P02458 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.96□□□□□ -1.94
COL2A1P02458 AC010493.1-201ENST00000513479 292 ntBASIC2.96□□□□□ -1.94
COL2A1P02458 RNU6-445P-201ENST00000516949 107 ntBASIC2.96□□□□□ -1.94
COL2A1P02458 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.96□□□□□ -1.94
COL2A1P02458 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms