Protein–RNA interactions for Protein: O95714

HERC2, E3 ubiquitin-protein ligase HERC2, humanhuman

Predictions only

Length 4,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2O95714 MIR515-2-201ENST00000384883 83 ntBASIC0.29□□□□□ -2.36
HERC2O95714 MIR515-1-201ENST00000384884 83 ntBASIC0.29□□□□□ -2.36
HERC2O95714 MIR938-201ENST00000401216 83 ntBASIC0.29□□□□□ -2.36
HERC2O95714 MTCO3P46-201ENST00000425787 232 ntBASIC0.29□□□□□ -2.36
HERC2O95714 MTND4P6-201ENST00000438297 472 ntBASIC0.29□□□□□ -2.36
HERC2O95714 RNU4-57P-201ENST00000515980 135 ntBASIC0.29□□□□□ -2.36
HERC2O95714 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.29□□□□□ -2.36
HERC2O95714 AC090115.3-201ENST00000553218 849 ntBASIC0.29□□□□□ -2.36
HERC2O95714 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
HERC2O95714 EFTUD1P2-201ENST00000514817 1603 ntBASIC0.29□□□□□ -2.36
HERC2O95714 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
HERC2O95714 AL031183.1-201ENST00000457667 207 ntBASIC0.29□□□□□ -2.36
HERC2O95714 PMCHL2-203ENST00000457791 237 ntBASIC0.29□□□□□ -2.36
HERC2O95714 TPT1P8-201ENST00000510120 555 ntBASIC0.29□□□□□ -2.36
HERC2O95714 AC112206.3-201ENST00000514578 389 ntBASIC0.29□□□□□ -2.36
HERC2O95714 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.29□□□□□ -2.36
HERC2O95714 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.29□□□□□ -2.36
HERC2O95714 RNA5SP492-201ENST00000411330 114 ntBASIC0.28□□□□□ -2.36
HERC2O95714 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC0.28□□□□□ -2.36
HERC2O95714 AC092832.1-201ENST00000422934 400 ntBASIC0.28□□□□□ -2.36
HERC2O95714 AC104308.1-201ENST00000454621 333 ntBASIC0.28□□□□□ -2.36
HERC2O95714 Y_RNA.659-201ENST00000515994 113 ntBASIC0.28□□□□□ -2.36
HERC2O95714 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.28□□□□□ -2.36
HERC2O95714 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.28□□□□□ -2.36
HERC2O95714 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
HERC2O95714 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.28□□□□□ -2.36
HERC2O95714 RNY4P6-201ENST00000363667 96 ntBASIC0.28□□□□□ -2.36
HERC2O95714 SNORA67.1-201ENST00000364749 141 ntBASIC0.28□□□□□ -2.36
HERC2O95714 SNORA22-201ENST00000383907 134 ntBASIC0.28□□□□□ -2.36
HERC2O95714 SNORA22C-201ENST00000384614 134 ntBASIC0.28□□□□□ -2.36
HERC2O95714 RNU4ATAC16P-201ENST00000408512 126 ntBASIC0.28□□□□□ -2.36
HERC2O95714 RN7SKP61-201ENST00000410642 295 ntBASIC0.28□□□□□ -2.36
HERC2O95714 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC0.28□□□□□ -2.36
HERC2O95714 BTF3P11-201ENST00000426582 477 ntBASIC0.28□□□□□ -2.36
HERC2O95714 ISCA1P1-201ENST00000426679 387 ntBASIC0.28□□□□□ -2.36
HERC2O95714 UBBP3-201ENST00000445497 241 ntBASIC0.28□□□□□ -2.36
HERC2O95714 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.28□□□□□ -2.36
HERC2O95714 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.28□□□□□ -2.36
HERC2O95714 KLF3P2-201ENST00000465138 268 ntBASIC0.28□□□□□ -2.36
HERC2O95714 AL121769.1-201ENST00000469473 401 ntBASIC0.28□□□□□ -2.36
HERC2O95714 AC096745.1-201ENST00000509945 370 ntBASIC0.28□□□□□ -2.36
HERC2O95714 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.28□□□□□ -2.36
HERC2O95714 NOP56P3-201ENST00000549457 385 ntBASIC0.28□□□□□ -2.36
HERC2O95714 AC243960.4-201ENST00000600532 288 ntBASIC0.28□□□□□ -2.36
HERC2O95714 AC106052.1-201ENST00000608029 497 ntBASIC0.28□□□□□ -2.36
HERC2O95714 RNU6-939P-201ENST00000384634 107 ntBASIC0.28□□□□□ -2.37
HERC2O95714 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.28□□□□□ -2.37
HERC2O95714 AL358794.1-201ENST00000445689 381 ntBASIC0.28□□□□□ -2.37
HERC2O95714 MTND5P8-201ENST00000449817 1083 ntBASIC0.28□□□□□ -2.37
HERC2O95714 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.28□□□□□ -2.37
HERC2O95714 AL355802.3-201ENST00000607571 545 ntBASIC0.28□□□□□ -2.37
HERC2O95714 AL355472.4-201ENST00000610233 626 ntBASIC0.28□□□□□ -2.37
HERC2O95714 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC0.28□□□□□ -2.37
HERC2O95714 Y_RNA.293-201ENST00000364908 93 ntBASIC0.27□□□□□ -2.37
HERC2O95714 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.27□□□□□ -2.37
HERC2O95714 RSU1P2-202ENST00000437884 485 ntBASIC0.27□□□□□ -2.37
HERC2O95714 MTND5P14-201ENST00000441481 1267 ntBASIC0.27□□□□□ -2.37
HERC2O95714 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC0.27□□□□□ -2.37
HERC2O95714 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
HERC2O95714 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.27□□□□□ -2.37
HERC2O95714 AC112487.2-201ENST00000637950 304 ntBASIC0.27□□□□□ -2.37
HERC2O95714 Y_RNA.52-201ENST00000362760 96 ntBASIC0.27□□□□□ -2.37
HERC2O95714 SNORD114-31-201ENST00000363219 75 ntBASIC0.27□□□□□ -2.37
HERC2O95714 SNORA36.1-201ENST00000363424 132 ntBASIC0.27□□□□□ -2.37
HERC2O95714 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC0.27□□□□□ -2.37
HERC2O95714 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC0.27□□□□□ -2.37
HERC2O95714 ARPC3P2-201ENST00000457786 533 ntBASIC0.27□□□□□ -2.37
HERC2O95714 AC135178.6-201ENST00000605314 398 ntBASIC0.27□□□□□ -2.37
HERC2O95714 RNU4-32P-201ENST00000363404 141 ntBASIC0.27□□□□□ -2.37
HERC2O95714 Z96811.1-201ENST00000445880 108 ntBASIC0.27□□□□□ -2.37
HERC2O95714 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC0.27□□□□□ -2.37
HERC2O95714 AC087884.1-201ENST00000469738 328 ntBASIC0.27□□□□□ -2.37
HERC2O95714 AC008751.2-201ENST00000597885 980 ntBASIC0.27□□□□□ -2.37
HERC2O95714 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.27□□□□□ -2.37
HERC2O95714 uc_338.9-201ENST00000617424 182 ntBASIC0.27□□□□□ -2.37
HERC2O95714 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC0.27□□□□□ -2.37
HERC2O95714 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
HERC2O95714 RNU6-1181P-201ENST00000384191 106 ntBASIC0.27□□□□□ -2.37
HERC2O95714 RPL37P21-201ENST00000435890 276 ntBASIC0.27□□□□□ -2.37
HERC2O95714 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC0.27□□□□□ -2.37
HERC2O95714 AC016717.1-201ENST00000448918 286 ntBASIC0.27□□□□□ -2.37
HERC2O95714 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC0.27□□□□□ -2.37
HERC2O95714 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
HERC2O95714 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC0.27□□□□□ -2.37
HERC2O95714 AP005639.2-201ENST00000527592 928 ntBASIC0.27□□□□□ -2.37
HERC2O95714 AL163153.1-201ENST00000554223 283 ntBASIC0.27□□□□□ -2.37
HERC2O95714 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.27□□□□□ -2.37
HERC2O95714 AL136313.1-201ENST00000624804 202 ntBASIC0.27□□□□□ -2.37
HERC2O95714 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC0.27□□□□□ -2.37
HERC2O95714 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC0.26□□□□□ -2.37
HERC2O95714 KLRA1P-201ENST00000503499 986 ntBASIC0.26□□□□□ -2.37
HERC2O95714 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC0.26□□□□□ -2.37
HERC2O95714 AC008945.2-201ENST00000606056 604 ntBASIC0.26□□□□□ -2.37
HERC2O95714 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.26□□□□□ -2.37
HERC2O95714 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC0.26□□□□□ -2.37
HERC2O95714 Y_RNA.55-201ENST00000362797 102 ntBASIC0.26□□□□□ -2.37
HERC2O95714 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
HERC2O95714 ZNF90P2-204ENST00000419323 1075 ntBASIC0.26□□□□□ -2.37
HERC2O95714 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.26□□□□□ -2.37
HERC2O95714 AC104685.1-201ENST00000502445 371 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms