Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.94□□□□□ -2.1
VAPBO95292 LRRC6P1-201ENST00000532188 885 ntBASIC1.94□□□□□ -2.1
VAPBO95292 AC005832.3-201ENST00000537929 631 ntBASIC1.94□□□□□ -2.1
VAPBO95292 ANP32BP3-201ENST00000559213 706 ntBASIC1.94□□□□□ -2.1
VAPBO95292 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.94□□□□□ -2.1
VAPBO95292 AL132657.2-201ENST00000564417 358 ntBASIC1.94□□□□□ -2.1
VAPBO95292 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.94□□□□□ -2.1
VAPBO95292 RPP40P2-201ENST00000603596 712 ntBASIC1.94□□□□□ -2.1
VAPBO95292 U4atac.1-201ENST00000618345 95 ntBASIC1.94□□□□□ -2.1
VAPBO95292 AP000943.4-201ENST00000622912 357 ntBASIC1.94□□□□□ -2.1
VAPBO95292 AC079416.3-201ENST00000624479 549 ntBASIC1.94□□□□□ -2.1
VAPBO95292 U2.21-201ENST00000637295 81 ntBASIC1.94□□□□□ -2.1
VAPBO95292 AP006437.1-201ENST00000641440 3685 ntBASIC1.94□□□□□ -2.1
VAPBO95292 AL109809.4-201ENST00000603520 2185 ntBASIC1.93□□□□□ -2.1
VAPBO95292 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.93□□□□□ -2.1
VAPBO95292 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.93□□□□□ -2.1
VAPBO95292 RNU6-1167P-201ENST00000363227 94 ntBASIC1.93□□□□□ -2.1
VAPBO95292 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.93□□□□□ -2.1
VAPBO95292 RNU6-19P-201ENST00000384718 107 ntBASIC1.93□□□□□ -2.1
VAPBO95292 RSL24D1P4-201ENST00000400938 484 ntBASIC1.93□□□□□ -2.1
VAPBO95292 SUMO2P12-201ENST00000405924 140 ntBASIC1.93□□□□□ -2.1
VAPBO95292 EIF1AXP1-201ENST00000419267 435 ntBASIC1.93□□□□□ -2.1
VAPBO95292 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.93□□□□□ -2.1
VAPBO95292 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.93□□□□□ -2.1
VAPBO95292 USP9YP21-201ENST00000420603 432 ntBASIC1.93□□□□□ -2.1
VAPBO95292 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.93□□□□□ -2.1
VAPBO95292 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.93□□□□□ -2.1
VAPBO95292 SNRPEP7-201ENST00000438350 220 ntBASIC1.93□□□□□ -2.1
VAPBO95292 HMGB1P36-201ENST00000487709 576 ntBASIC1.93□□□□□ -2.1
VAPBO95292 RPL22P13-201ENST00000493291 347 ntBASIC1.93□□□□□ -2.1
VAPBO95292 CKS1BP2-201ENST00000497342 240 ntBASIC1.93□□□□□ -2.1
VAPBO95292 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
VAPBO95292 RNY4P37-201ENST00000516225 96 ntBASIC1.93□□□□□ -2.1
VAPBO95292 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.93□□□□□ -2.1
VAPBO95292 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.93□□□□□ -2.1
VAPBO95292 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.93□□□□□ -2.1
VAPBO95292 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.93□□□□□ -2.1
VAPBO95292 AC006199.1-201ENST00000548728 219 ntBASIC1.93□□□□□ -2.1
VAPBO95292 CYCSP2-201ENST00000558168 301 ntBASIC1.93□□□□□ -2.1
VAPBO95292 AC021739.1-201ENST00000559631 174 ntBASIC1.93□□□□□ -2.1
VAPBO95292 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.93□□□□□ -2.1
VAPBO95292 AC104072.1-201ENST00000568817 668 ntBASIC1.93□□□□□ -2.1
VAPBO95292 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.93□□□□□ -2.1
VAPBO95292 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.93□□□□□ -2.1
VAPBO95292 AC005261.5-201ENST00000596280 355 ntBASIC1.93□□□□□ -2.1
VAPBO95292 MTCYBP22-201ENST00000603788 447 ntBASIC1.93□□□□□ -2.1
VAPBO95292 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.93□□□□□ -2.1
VAPBO95292 AC011939.3-201ENST00000613686 466 ntBASIC1.93□□□□□ -2.1
VAPBO95292 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.93□□□□□ -2.1
VAPBO95292 AC244517.12-201ENST00000623581 663 ntBASIC1.93□□□□□ -2.1
VAPBO95292 AL390862.1-201ENST00000635467 1469 ntBASIC1.93□□□□□ -2.1
VAPBO95292 HSPA8P4-201ENST00000511877 1920 ntBASIC1.93□□□□□ -2.1
VAPBO95292 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
VAPBO95292 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
VAPBO95292 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.92□□□□□ -2.1
VAPBO95292 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
VAPBO95292 Y_RNA.110-201ENST00000363220 99 ntBASIC1.92□□□□□ -2.1
VAPBO95292 SNORA16B-201ENST00000364674 135 ntBASIC1.92□□□□□ -2.1
VAPBO95292 RNU6-744P-201ENST00000365557 107 ntBASIC1.92□□□□□ -2.1
VAPBO95292 RNU6-1316P-201ENST00000384242 108 ntBASIC1.92□□□□□ -2.1
VAPBO95292 RNU1-148P-201ENST00000384472 162 ntBASIC1.92□□□□□ -2.1
VAPBO95292 MIR23A-201ENST00000385245 73 ntBASIC1.92□□□□□ -2.1
VAPBO95292 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.92□□□□□ -2.1
VAPBO95292 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.92□□□□□ -2.1
VAPBO95292 AL353729.1-201ENST00000425044 720 ntBASIC1.92□□□□□ -2.1
VAPBO95292 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
VAPBO95292 HMGN2P10-201ENST00000448085 265 ntBASIC1.92□□□□□ -2.1
VAPBO95292 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.92□□□□□ -2.1
VAPBO95292 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.92□□□□□ -2.1
VAPBO95292 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.92□□□□□ -2.1
VAPBO95292 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.92□□□□□ -2.1
VAPBO95292 AL441985.1-201ENST00000457727 251 ntBASIC1.92□□□□□ -2.1
VAPBO95292 AC079203.1-201ENST00000487972 404 ntBASIC1.92□□□□□ -2.1
VAPBO95292 RPL38P4-201ENST00000502376 214 ntBASIC1.92□□□□□ -2.1
VAPBO95292 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.92□□□□□ -2.1
VAPBO95292 AF213884.2-201ENST00000510417 903 ntBASIC1.92□□□□□ -2.1
VAPBO95292 AC021451.1-201ENST00000523498 1129 ntBASIC1.92□□□□□ -2.1
VAPBO95292 CBX3P7-201ENST00000532876 502 ntBASIC1.92□□□□□ -2.1
VAPBO95292 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.92□□□□□ -2.1
VAPBO95292 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.92□□□□□ -2.1
VAPBO95292 AC091544.4-201ENST00000555268 342 ntBASIC1.92□□□□□ -2.1
VAPBO95292 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.92□□□□□ -2.1
VAPBO95292 AL049838.1-201ENST00000563647 981 ntBASIC1.92□□□□□ -2.1
VAPBO95292 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.92□□□□□ -2.1
VAPBO95292 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.92□□□□□ -2.1
VAPBO95292 AC124016.2-201ENST00000610058 665 ntBASIC1.92□□□□□ -2.1
VAPBO95292 DUSP12P1-201ENST00000612874 516 ntBASIC1.92□□□□□ -2.1
VAPBO95292 AC107075.1-201ENST00000613695 314 ntBASIC1.92□□□□□ -2.1
VAPBO95292 AC104763.3-201ENST00000613765 618 ntBASIC1.92□□□□□ -2.1
VAPBO95292 AL512427.1-201ENST00000618593 349 ntBASIC1.92□□□□□ -2.1
VAPBO95292 AC007490.1-201ENST00000624321 703 ntBASIC1.92□□□□□ -2.1
VAPBO95292 OR1S1-201ENST00000624470 978 ntBASIC1.92□□□□□ -2.1
VAPBO95292 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.92□□□□□ -2.1
VAPBO95292 AC104454.1-201ENST00000421341 1401 ntBASIC1.91□□□□□ -2.1
VAPBO95292 AC009487.4-201ENST00000624969 3585 ntBASIC1.91□□□□□ -2.1
VAPBO95292 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
VAPBO95292 SNORA46.1-201ENST00000391069 153 ntBASIC1.91□□□□□ -2.1
VAPBO95292 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.91□□□□□ -2.1
VAPBO95292 RPS24P7-201ENST00000416921 246 ntBASIC1.91□□□□□ -2.1
VAPBO95292 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms