Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AC007785.2-201ENST00000598627 1916 ntBASIC1.03□□□□□ -2.24
LTN1O94822 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.03□□□□□ -2.24
LTN1O94822 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.03□□□□□ -2.24
LTN1O94822 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.03□□□□□ -2.24
LTN1O94822 AC139453.3-201ENST00000493276 369 ntBASIC1.03□□□□□ -2.24
LTN1O94822 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.03□□□□□ -2.24
LTN1O94822 Y_RNA.681-201ENST00000516445 113 ntBASIC1.03□□□□□ -2.24
LTN1O94822 AP002791.1-201ENST00000623291 381 ntBASIC1.03□□□□□ -2.24
LTN1O94822 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.03□□□□□ -2.24
LTN1O94822 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.03□□□□□ -2.25
LTN1O94822 AL589743.1-201ENST00000551932 2712 ntBASIC1.02□□□□□ -2.25
LTN1O94822 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
LTN1O94822 AL139397.2-201ENST00000404529 772 ntBASIC1.02□□□□□ -2.25
LTN1O94822 AC096920.1-201ENST00000423991 241 ntBASIC1.02□□□□□ -2.25
LTN1O94822 AC092393.1-201ENST00000439625 742 ntBASIC1.02□□□□□ -2.25
LTN1O94822 JTBP1-201ENST00000441314 247 ntBASIC1.02□□□□□ -2.25
LTN1O94822 snoU13.7-201ENST00000459220 104 ntBASIC1.02□□□□□ -2.25
LTN1O94822 snoU13.28-201ENST00000459235 104 ntBASIC1.02□□□□□ -2.25
LTN1O94822 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC1.02□□□□□ -2.25
LTN1O94822 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.02□□□□□ -2.25
LTN1O94822 FAM206BP-201ENST00000510179 541 ntBASIC1.02□□□□□ -2.25
LTN1O94822 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.02□□□□□ -2.25
LTN1O94822 RRN3P3-201ENST00000549207 578 ntBASIC1.02□□□□□ -2.25
LTN1O94822 MIR6835-201ENST00000621552 64 ntBASIC1.02□□□□□ -2.25
LTN1O94822 MIR7515-201ENST00000637837 67 ntBASIC1.02□□□□□ -2.25
LTN1O94822 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
LTN1O94822 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.02□□□□□ -2.25
LTN1O94822 RNU6-939P-201ENST00000384634 107 ntBASIC1.01□□□□□ -2.25
LTN1O94822 RNA5SP212-201ENST00000391223 107 ntBASIC1.01□□□□□ -2.25
LTN1O94822 BTF3L4P2-201ENST00000392798 346 ntBASIC1.01□□□□□ -2.25
LTN1O94822 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.01□□□□□ -2.25
LTN1O94822 AC079448.1-201ENST00000449377 373 ntBASIC1.01□□□□□ -2.25
LTN1O94822 BX248409.1-201ENST00000455497 255 ntBASIC1.01□□□□□ -2.25
LTN1O94822 OR2A41P-201ENST00000473586 105 ntBASIC1.01□□□□□ -2.25
LTN1O94822 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.01□□□□□ -2.25
LTN1O94822 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.01□□□□□ -2.25
LTN1O94822 AC036111.3-201ENST00000526389 112 ntBASIC1.01□□□□□ -2.25
LTN1O94822 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.01□□□□□ -2.25
LTN1O94822 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.01□□□□□ -2.25
LTN1O94822 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC1.01□□□□□ -2.25
LTN1O94822 MIR8087-201ENST00000612745 78 ntBASIC1.01□□□□□ -2.25
LTN1O94822 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
LTN1O94822 DEFB108F-201ENST00000344638 222 ntBASIC1.01□□□□□ -2.25
LTN1O94822 RPL7L1P10-201ENST00000427790 463 ntBASIC1.01□□□□□ -2.25
LTN1O94822 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.01□□□□□ -2.25
LTN1O94822 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC1.01□□□□□ -2.25
LTN1O94822 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
LTN1O94822 OR6C72P-201ENST00000451403 892 ntBASIC1.01□□□□□ -2.25
LTN1O94822 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.01□□□□□ -2.25
LTN1O94822 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC1.01□□□□□ -2.25
LTN1O94822 AC073111.2-201ENST00000605657 1075 ntBASIC1.01□□□□□ -2.25
LTN1O94822 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.01□□□□□ -2.25
LTN1O94822 MTND5P9-201ENST00000503854 1755 ntBASIC1□□□□□ -2.25
LTN1O94822 Y_RNA.458-201ENST00000384240 102 ntBASIC1□□□□□ -2.25
LTN1O94822 TATDN1P1-201ENST00000414123 891 ntBASIC1□□□□□ -2.25
LTN1O94822 AC241584.1-201ENST00000438469 1241 ntBASIC1□□□□□ -2.25
LTN1O94822 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1□□□□□ -2.25
LTN1O94822 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC1□□□□□ -2.25
LTN1O94822 MRPS36P2-201ENST00000512569 299 ntBASIC1□□□□□ -2.25
LTN1O94822 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1□□□□□ -2.25
LTN1O94822 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1□□□□□ -2.25
LTN1O94822 AC090132.2-201ENST00000615881 347 ntBASIC1□□□□□ -2.25
LTN1O94822 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
LTN1O94822 Y_RNA.85-201ENST00000363014 111 ntBASIC0.99□□□□□ -2.25
LTN1O94822 U3.29-201ENST00000391296 212 ntBASIC0.99□□□□□ -2.25
LTN1O94822 OR9R1P-201ENST00000412200 877 ntBASIC0.99□□□□□ -2.25
LTN1O94822 AL158823.1-201ENST00000418441 478 ntBASIC0.99□□□□□ -2.25
LTN1O94822 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC0.99□□□□□ -2.25
LTN1O94822 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC0.99□□□□□ -2.25
LTN1O94822 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC0.99□□□□□ -2.25
LTN1O94822 NIFKP8-201ENST00000560500 874 ntBASIC0.99□□□□□ -2.25
LTN1O94822 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.99□□□□□ -2.25
LTN1O94822 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC0.99□□□□□ -2.25
LTN1O94822 AP003476.1-201ENST00000623984 516 ntBASIC0.99□□□□□ -2.25
LTN1O94822 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.99□□□□□ -2.25
LTN1O94822 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
LTN1O94822 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC0.98□□□□□ -2.25
LTN1O94822 RNA5SP276-201ENST00000362580 94 ntBASIC0.98□□□□□ -2.25
LTN1O94822 RNU6-198P-201ENST00000384258 104 ntBASIC0.98□□□□□ -2.25
LTN1O94822 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.98□□□□□ -2.25
LTN1O94822 AC098614.2-201ENST00000426040 255 ntBASIC0.98□□□□□ -2.25
LTN1O94822 AL591704.1-201ENST00000432574 275 ntBASIC0.98□□□□□ -2.25
LTN1O94822 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC0.98□□□□□ -2.25
LTN1O94822 AC087588.1-201ENST00000462203 316 ntBASIC0.98□□□□□ -2.25
LTN1O94822 AC112198.4-201ENST00000515450 351 ntBASIC0.98□□□□□ -2.25
LTN1O94822 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC0.98□□□□□ -2.25
LTN1O94822 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.98□□□□□ -2.25
LTN1O94822 AC005786.1-201ENST00000588553 154 ntBASIC0.98□□□□□ -2.25
LTN1O94822 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.98□□□□□ -2.25
LTN1O94822 AL356473.1-201ENST00000406203 1408 ntBASIC0.98□□□□□ -2.25
LTN1O94822 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.98□□□□□ -2.25
LTN1O94822 MIR1197-201ENST00000408818 88 ntBASIC0.98□□□□□ -2.25
LTN1O94822 RN7SKP200-201ENST00000410564 320 ntBASIC0.98□□□□□ -2.25
LTN1O94822 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC0.98□□□□□ -2.25
LTN1O94822 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.98□□□□□ -2.25
LTN1O94822 AC115085.1-201ENST00000588924 229 ntBASIC0.98□□□□□ -2.25
LTN1O94822 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.98□□□□□ -2.25
LTN1O94822 AC106900.2-201ENST00000604994 317 ntBASIC0.98□□□□□ -2.25
LTN1O94822 AC103710.4-201ENST00000609301 899 ntBASIC0.98□□□□□ -2.25
LTN1O94822 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms