Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AL670379.12-201ENST00000605291 253 ntBASIC3.28□□□□□ -1.88
ATP2A1O14983 AL670379.8-201ENST00000605353 252 ntBASIC3.28□□□□□ -1.88
ATP2A1O14983 AC008962.1-201ENST00000605729 304 ntBASIC3.28□□□□□ -1.88
ATP2A1O14983 AL670379.7-201ENST00000605823 252 ntBASIC3.28□□□□□ -1.88
ATP2A1O14983 MIR98-201ENST00000606724 119 ntBASIC3.28□□□□□ -1.88
ATP2A1O14983 AC015540.1-201ENST00000615828 501 ntBASIC3.28□□□□□ -1.88
ATP2A1O14983 AC136475.10-201ENST00000620253 385 ntBASIC3.28□□□□□ -1.88
ATP2A1O14983 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.28□□□□□ -1.88
ATP2A1O14983 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.28□□□□□ -1.88
ATP2A1O14983 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ATP2A1O14983 AL137003.2-201ENST00000606924 2538 ntBASIC3.28□□□□□ -1.88
ATP2A1O14983 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.28□□□□□ -1.88
ATP2A1O14983 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.27□□□□□ -1.89
ATP2A1O14983 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
ATP2A1O14983 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
ATP2A1O14983 RNU6-169P-201ENST00000365336 107 ntBASIC3.27□□□□□ -1.89
ATP2A1O14983 RNU5E-6P-201ENST00000365574 115 ntBASIC3.27□□□□□ -1.89
ATP2A1O14983 RN7SKP58-201ENST00000411010 305 ntBASIC3.27□□□□□ -1.89
ATP2A1O14983 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.27□□□□□ -1.89
ATP2A1O14983 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.27□□□□□ -1.89
ATP2A1O14983 FCF1P1-201ENST00000432690 571 ntBASIC3.27□□□□□ -1.89
ATP2A1O14983 SNRPEP4-201ENST00000435815 279 ntBASIC3.27□□□□□ -1.89
ATP2A1O14983 TAAR7P-201ENST00000436141 242 ntBASIC3.27□□□□□ -1.89
ATP2A1O14983 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.27□□□□□ -1.89
ATP2A1O14983 SNRPGP6-201ENST00000451124 220 ntBASIC3.27□□□□□ -1.89
ATP2A1O14983 RN7SL432P-201ENST00000484057 298 ntBASIC3.27□□□□□ -1.89
ATP2A1O14983 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.27□□□□□ -1.89
ATP2A1O14983 AC091133.4-201ENST00000511142 308 ntBASIC3.27□□□□□ -1.89
ATP2A1O14983 RNU6-1256P-201ENST00000516539 103 ntBASIC3.27□□□□□ -1.89
ATP2A1O14983 RN7SKP258-201ENST00000517151 304 ntBASIC3.27□□□□□ -1.89
ATP2A1O14983 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
ATP2A1O14983 AC022690.1-201ENST00000526681 550 ntBASIC3.27□□□□□ -1.89
ATP2A1O14983 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.27□□□□□ -1.89
ATP2A1O14983 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.27□□□□□ -1.89
ATP2A1O14983 RPS3AP4-201ENST00000555161 764 ntBASIC3.27□□□□□ -1.89
ATP2A1O14983 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.27□□□□□ -1.89
ATP2A1O14983 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.27□□□□□ -1.89
ATP2A1O14983 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.27□□□□□ -1.89
ATP2A1O14983 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.27□□□□□ -1.89
ATP2A1O14983 GLUD1P4-201ENST00000590914 418 ntBASIC3.27□□□□□ -1.89
ATP2A1O14983 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.27□□□□□ -1.89
ATP2A1O14983 AC012557.2-201ENST00000605919 418 ntBASIC3.27□□□□□ -1.89
ATP2A1O14983 AC087241.4-201ENST00000612441 480 ntBASIC3.27□□□□□ -1.89
ATP2A1O14983 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ATP2A1O14983 MAPK10-322ENST00000641485 4530 ntBASIC3.27□□□□□ -1.89
ATP2A1O14983 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
ATP2A1O14983 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
ATP2A1O14983 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
ATP2A1O14983 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.26□□□□□ -1.89
ATP2A1O14983 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.26□□□□□ -1.89
ATP2A1O14983 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ATP2A1O14983 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ATP2A1O14983 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
ATP2A1O14983 RNU6-259P-201ENST00000383999 107 ntBASIC3.26□□□□□ -1.89
ATP2A1O14983 Y_RNA.517-201ENST00000384551 106 ntBASIC3.26□□□□□ -1.89
ATP2A1O14983 NDUFS5P1-201ENST00000405668 289 ntBASIC3.26□□□□□ -1.89
ATP2A1O14983 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.26□□□□□ -1.89
ATP2A1O14983 ZNF90P2-204ENST00000419323 1075 ntBASIC3.26□□□□□ -1.89
ATP2A1O14983 DPPA2P1-201ENST00000428060 556 ntBASIC3.26□□□□□ -1.89
ATP2A1O14983 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.26□□□□□ -1.89
ATP2A1O14983 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.26□□□□□ -1.89
ATP2A1O14983 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.26□□□□□ -1.89
ATP2A1O14983 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.26□□□□□ -1.89
ATP2A1O14983 MTATP6P30-201ENST00000443540 664 ntBASIC3.26□□□□□ -1.89
ATP2A1O14983 C1DP4-201ENST00000455429 424 ntBASIC3.26□□□□□ -1.89
ATP2A1O14983 RPS3AP17-201ENST00000472594 777 ntBASIC3.26□□□□□ -1.89
ATP2A1O14983 AC006483.1-201ENST00000487308 313 ntBASIC3.26□□□□□ -1.89
ATP2A1O14983 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.26□□□□□ -1.89
ATP2A1O14983 RNU6-1092P-201ENST00000516955 87 ntBASIC3.26□□□□□ -1.89
ATP2A1O14983 RNU6-1220P-201ENST00000517126 108 ntBASIC3.26□□□□□ -1.89
ATP2A1O14983 AC090572.1-201ENST00000519251 160 ntBASIC3.26□□□□□ -1.89
ATP2A1O14983 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.26□□□□□ -1.89
ATP2A1O14983 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ATP2A1O14983 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.26□□□□□ -1.89
ATP2A1O14983 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.26□□□□□ -1.89
ATP2A1O14983 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.26□□□□□ -1.89
ATP2A1O14983 HMGB1P6-201ENST00000569046 646 ntBASIC3.26□□□□□ -1.89
ATP2A1O14983 AC010546.1-201ENST00000569391 485 ntBASIC3.26□□□□□ -1.89
ATP2A1O14983 AC013553.2-201ENST00000604244 589 ntBASIC3.26□□□□□ -1.89
ATP2A1O14983 AP002360.4-201ENST00000606980 481 ntBASIC3.26□□□□□ -1.89
ATP2A1O14983 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.26□□□□□ -1.89
ATP2A1O14983 AC068880.5-201ENST00000624331 290 ntBASIC3.26□□□□□ -1.89
ATP2A1O14983 AL359740.1-201ENST00000624340 592 ntBASIC3.26□□□□□ -1.89
ATP2A1O14983 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ATP2A1O14983 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.26□□□□□ -1.89
ATP2A1O14983 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ATP2A1O14983 AC108206.1-201ENST00000570186 4159 ntBASIC3.25□□□□□ -1.89
ATP2A1O14983 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.25□□□□□ -1.89
ATP2A1O14983 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
ATP2A1O14983 MIR449A-201ENST00000362113 91 ntBASIC3.25□□□□□ -1.89
ATP2A1O14983 SNORA51.4-201ENST00000364993 124 ntBASIC3.25□□□□□ -1.89
ATP2A1O14983 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.25□□□□□ -1.89
ATP2A1O14983 RNU6-39P-201ENST00000384344 107 ntBASIC3.25□□□□□ -1.89
ATP2A1O14983 MIR558-201ENST00000384920 94 ntBASIC3.25□□□□□ -1.89
ATP2A1O14983 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.25□□□□□ -1.89
ATP2A1O14983 BMS1P22-201ENST00000414726 313 ntBASIC3.25□□□□□ -1.89
ATP2A1O14983 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.25□□□□□ -1.89
ATP2A1O14983 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.25□□□□□ -1.89
ATP2A1O14983 AC012498.1-201ENST00000424037 437 ntBASIC3.25□□□□□ -1.89
ATP2A1O14983 MED13P1-201ENST00000428342 171 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms