Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 AL158801.5-201ENST00000623123 465 ntBASIC1.99□□□□□ -2.09
DFFAO00273 MIR7157-201ENST00000635801 60 ntBASIC1.99□□□□□ -2.09
DFFAO00273 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
DFFAO00273 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.99□□□□□ -2.09
DFFAO00273 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.98□□□□□ -2.09
DFFAO00273 Y_RNA.311-201ENST00000365068 96 ntBASIC1.98□□□□□ -2.09
DFFAO00273 Y_RNA.472-201ENST00000384322 102 ntBASIC1.98□□□□□ -2.09
DFFAO00273 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.98□□□□□ -2.09
DFFAO00273 NPM1P11-201ENST00000417106 855 ntBASIC1.98□□□□□ -2.09
DFFAO00273 USP9YP26-201ENST00000421008 661 ntBASIC1.98□□□□□ -2.09
DFFAO00273 OOSP1P1-201ENST00000423265 274 ntBASIC1.98□□□□□ -2.09
DFFAO00273 AC007560.1-201ENST00000426912 237 ntBASIC1.98□□□□□ -2.09
DFFAO00273 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.98□□□□□ -2.09
DFFAO00273 AC020550.1-201ENST00000447385 163 ntBASIC1.98□□□□□ -2.09
DFFAO00273 MTND1P16-201ENST00000465177 898 ntBASIC1.98□□□□□ -2.09
DFFAO00273 DYNLL1P5-201ENST00000467158 270 ntBASIC1.98□□□□□ -2.09
DFFAO00273 RNA5SP364-201ENST00000516938 78 ntBASIC1.98□□□□□ -2.09
DFFAO00273 SCARNA3-201ENST00000517097 143 ntBASIC1.98□□□□□ -2.09
DFFAO00273 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.98□□□□□ -2.09
DFFAO00273 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.98□□□□□ -2.09
DFFAO00273 MTCO2P15-201ENST00000532655 656 ntBASIC1.98□□□□□ -2.09
DFFAO00273 NACAP3-201ENST00000552100 481 ntBASIC1.98□□□□□ -2.09
DFFAO00273 YWHAZP1-201ENST00000556286 722 ntBASIC1.98□□□□□ -2.09
DFFAO00273 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.98□□□□□ -2.09
DFFAO00273 AL021997.1-201ENST00000605757 193 ntBASIC1.98□□□□□ -2.09
DFFAO00273 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.98□□□□□ -2.09
DFFAO00273 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.98□□□□□ -2.09
DFFAO00273 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.98□□□□□ -2.09
DFFAO00273 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.97□□□□□ -2.09
DFFAO00273 AL359851.1-201ENST00000569460 4997 ntBASIC1.97□□□□□ -2.09
DFFAO00273 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.97□□□□□ -2.09
DFFAO00273 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
DFFAO00273 RNU6-777P-201ENST00000364265 104 ntBASIC1.97□□□□□ -2.09
DFFAO00273 RPL26P27-201ENST00000414397 437 ntBASIC1.97□□□□□ -2.09
DFFAO00273 BTF3L4P3-201ENST00000418879 476 ntBASIC1.97□□□□□ -2.09
DFFAO00273 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.97□□□□□ -2.09
DFFAO00273 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC1.97□□□□□ -2.09
DFFAO00273 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.97□□□□□ -2.09
DFFAO00273 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.97□□□□□ -2.09
DFFAO00273 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.97□□□□□ -2.09
DFFAO00273 CECR9-201ENST00000453421 199 ntBASIC1.97□□□□□ -2.09
DFFAO00273 RN7SL429P-201ENST00000479090 223 ntBASIC1.97□□□□□ -2.09
DFFAO00273 RN7SL489P-201ENST00000486185 223 ntBASIC1.97□□□□□ -2.09
DFFAO00273 RN7SL327P-201ENST00000488659 223 ntBASIC1.97□□□□□ -2.09
DFFAO00273 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.97□□□□□ -2.09
DFFAO00273 RNU6-390P-201ENST00000516259 103 ntBASIC1.97□□□□□ -2.09
DFFAO00273 AC025755.1-201ENST00000521306 278 ntBASIC1.97□□□□□ -2.09
DFFAO00273 AP005902.1-201ENST00000521358 186 ntBASIC1.97□□□□□ -2.09
DFFAO00273 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.97□□□□□ -2.09
DFFAO00273 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.97□□□□□ -2.09
DFFAO00273 AL121652.1-201ENST00000608851 448 ntBASIC1.97□□□□□ -2.09
DFFAO00273 AC010678.1-201ENST00000614118 713 ntBASIC1.97□□□□□ -2.09
DFFAO00273 RN7SL853P-201ENST00000617250 223 ntBASIC1.97□□□□□ -2.09
DFFAO00273 AL138955.1-201ENST00000622881 1040 ntBASIC1.97□□□□□ -2.09
DFFAO00273 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.97□□□□□ -2.09
DFFAO00273 AP002791.1-201ENST00000623291 381 ntBASIC1.97□□□□□ -2.09
DFFAO00273 MIR3199-2-201ENST00000636243 86 ntBASIC1.97□□□□□ -2.09
DFFAO00273 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.96□□□□□ -2.09
DFFAO00273 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.96□□□□□ -2.09
DFFAO00273 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
DFFAO00273 MIR218-1-201ENST00000384999 110 ntBASIC1.96□□□□□ -2.1
DFFAO00273 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.96□□□□□ -2.1
DFFAO00273 RNU2-40P-201ENST00000410833 196 ntBASIC1.96□□□□□ -2.1
DFFAO00273 RPL17P12-201ENST00000413391 526 ntBASIC1.96□□□□□ -2.1
DFFAO00273 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.96□□□□□ -2.1
DFFAO00273 CYCSP48-201ENST00000417124 323 ntBASIC1.96□□□□□ -2.1
DFFAO00273 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.96□□□□□ -2.1
DFFAO00273 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.96□□□□□ -2.1
DFFAO00273 AL445685.2-201ENST00000422551 342 ntBASIC1.96□□□□□ -2.1
DFFAO00273 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.96□□□□□ -2.1
DFFAO00273 AP000949.1-201ENST00000438328 629 ntBASIC1.96□□□□□ -2.1
DFFAO00273 MTATP6P30-201ENST00000443540 664 ntBASIC1.96□□□□□ -2.1
DFFAO00273 EEF1E1P1-201ENST00000446998 430 ntBASIC1.96□□□□□ -2.1
DFFAO00273 PAXBP1P1-201ENST00000449315 447 ntBASIC1.96□□□□□ -2.1
DFFAO00273 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.96□□□□□ -2.1
DFFAO00273 KLF3P2-201ENST00000465138 268 ntBASIC1.96□□□□□ -2.1
DFFAO00273 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.96□□□□□ -2.1
DFFAO00273 RNU6-276P-201ENST00000516114 96 ntBASIC1.96□□□□□ -2.1
DFFAO00273 SNORA19.3-201ENST00000516165 130 ntBASIC1.96□□□□□ -2.1
DFFAO00273 SNORD19.2-201ENST00000516978 73 ntBASIC1.96□□□□□ -2.1
DFFAO00273 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.96□□□□□ -2.1
DFFAO00273 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.96□□□□□ -2.1
DFFAO00273 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.96□□□□□ -2.1
DFFAO00273 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.96□□□□□ -2.1
DFFAO00273 AC060771.1-201ENST00000582031 164 ntBASIC1.96□□□□□ -2.1
DFFAO00273 AC021171.1-201ENST00000603137 706 ntBASIC1.96□□□□□ -2.1
DFFAO00273 RPP40P2-201ENST00000603596 712 ntBASIC1.96□□□□□ -2.1
DFFAO00273 APOOP1-201ENST00000604695 592 ntBASIC1.96□□□□□ -2.1
DFFAO00273 AC006270.3-201ENST00000605967 1036 ntBASIC1.96□□□□□ -2.1
DFFAO00273 AC131235.4-201ENST00000609288 620 ntBASIC1.96□□□□□ -2.1
DFFAO00273 AC245297.2-201ENST00000610119 565 ntBASIC1.96□□□□□ -2.1
DFFAO00273 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.96□□□□□ -2.1
DFFAO00273 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.96□□□□□ -2.1
DFFAO00273 AC107075.1-201ENST00000613695 314 ntBASIC1.96□□□□□ -2.1
DFFAO00273 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
DFFAO00273 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
DFFAO00273 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.95□□□□□ -2.1
DFFAO00273 SNORD114-1-201ENST00000362705 72 ntBASIC1.95□□□□□ -2.1
DFFAO00273 RNU6-1167P-201ENST00000363227 94 ntBASIC1.95□□□□□ -2.1
DFFAO00273 RNU6-853P-201ENST00000364306 107 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms