Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.24□□□□□ -1.89
LRRC53A6NM62 AC022364.2-201ENST00000457963 554 ntBASIC3.24□□□□□ -1.89
LRRC53A6NM62 RPL37P6-201ENST00000460682 294 ntBASIC3.24□□□□□ -1.89
LRRC53A6NM62 RPL32P34-201ENST00000486380 400 ntBASIC3.24□□□□□ -1.89
LRRC53A6NM62 RBBP4P6-201ENST00000508098 202 ntBASIC3.24□□□□□ -1.89
LRRC53A6NM62 OR5AL2P-201ENST00000532185 920 ntBASIC3.24□□□□□ -1.89
LRRC53A6NM62 AL359212.1-201ENST00000556608 614 ntBASIC3.24□□□□□ -1.89
LRRC53A6NM62 MIR5680-201ENST00000577577 84 ntBASIC3.24□□□□□ -1.89
LRRC53A6NM62 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.24□□□□□ -1.89
LRRC53A6NM62 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.24□□□□□ -1.89
LRRC53A6NM62 AL158032.1-201ENST00000605401 106 ntBASIC3.24□□□□□ -1.89
LRRC53A6NM62 AC107294.1-201ENST00000609524 467 ntBASIC3.24□□□□□ -1.89
LRRC53A6NM62 MIR7975-201ENST00000619350 68 ntBASIC3.24□□□□□ -1.89
LRRC53A6NM62 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LRRC53A6NM62 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LRRC53A6NM62 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LRRC53A6NM62 API5P2-201ENST00000397055 1498 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 ZNF680P1-201ENST00000436625 1469 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 FAM35BP-202ENST00000497389 3337 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
LRRC53A6NM62 RNU6-1120P-201ENST00000362988 108 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 Y_RNA.381-201ENST00000365666 102 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
LRRC53A6NM62 SNORA54-201ENST00000384281 123 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 RNU6-1035P-201ENST00000384477 107 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 MIR454-201ENST00000390180 115 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 MTCO3P40-201ENST00000392516 676 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 CALM2P3-201ENST00000400429 449 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 AL354719.1-201ENST00000406535 843 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.23□□□□□ -1.89
LRRC53A6NM62 AL109913.1-201ENST00000421173 514 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 ISCA1P1-201ENST00000426679 387 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 ZNF863P-201ENST00000426746 417 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 TRIAP1P1-201ENST00000427062 225 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 GPM6BP2-201ENST00000432046 144 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 GPM6BP1-201ENST00000446387 144 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 FABP5P15-201ENST00000453566 214 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 RPL12P25-201ENST00000455592 494 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.23□□□□□ -1.89
LRRC53A6NM62 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.23□□□□□ -1.89
LRRC53A6NM62 RNU6-123P-201ENST00000516163 102 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 RNU6-506P-201ENST00000516553 94 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 SNORD59.2-201ENST00000516873 68 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
LRRC53A6NM62 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LRRC53A6NM62 HMGB1P6-201ENST00000569046 646 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 MIR4775-201ENST00000581168 75 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 AC004805.2-201ENST00000605382 482 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 AL021997.1-201ENST00000605757 193 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 AC008536.2-201ENST00000607284 349 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 AF250324.2-201ENST00000608299 610 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 AC013562.2-201ENST00000611632 603 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 AC122108.2-201ENST00000611946 526 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 AC012409.4-201ENST00000612923 249 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 MIR7112-201ENST00000616126 65 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 AC073534.2-201ENST00000620377 381 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 AC068792.1-201ENST00000621354 417 ntBASIC3.23□□□□□ -1.89
LRRC53A6NM62 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.23□□□□□ -1.89
LRRC53A6NM62 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.23□□□□□ -1.89
LRRC53A6NM62 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LRRC53A6NM62 MTND5P17-201ENST00000418405 1603 ntBASIC3.22□□□□□ -1.89
LRRC53A6NM62 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LRRC53A6NM62 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.22□□□□□ -1.89
LRRC53A6NM62 AC110774.1-201ENST00000623567 2018 ntBASIC3.22□□□□□ -1.89
LRRC53A6NM62 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LRRC53A6NM62 AL035425.3-201ENST00000564206 4996 ntBASIC3.22□□□□□ -1.89
LRRC53A6NM62 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
LRRC53A6NM62 MIR22-201ENST00000362190 85 ntBASIC3.22□□□□□ -1.89
LRRC53A6NM62 SNORA51.4-201ENST00000364993 124 ntBASIC3.22□□□□□ -1.89
LRRC53A6NM62 RNU4-48P-201ENST00000365559 182 ntBASIC3.22□□□□□ -1.89
LRRC53A6NM62 MIR449B-201ENST00000384995 97 ntBASIC3.22□□□□□ -1.89
LRRC53A6NM62 RNA5SP252-201ENST00000391131 119 ntBASIC3.22□□□□□ -1.89
LRRC53A6NM62 RNU6-192P-201ENST00000391253 100 ntBASIC3.22□□□□□ -1.89
LRRC53A6NM62 RPS4XP8-201ENST00000402039 771 ntBASIC3.22□□□□□ -1.89
LRRC53A6NM62 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.22□□□□□ -1.89
LRRC53A6NM62 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.22□□□□□ -1.89
LRRC53A6NM62 RN7SKP58-201ENST00000411010 305 ntBASIC3.22□□□□□ -1.89
LRRC53A6NM62 UBE2V1P10-201ENST00000414685 269 ntBASIC3.22□□□□□ -1.89
LRRC53A6NM62 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.22□□□□□ -1.89
LRRC53A6NM62 AL353678.1-201ENST00000422735 741 ntBASIC3.22□□□□□ -1.89
LRRC53A6NM62 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.22□□□□□ -1.89
LRRC53A6NM62 MTND1P34-201ENST00000438556 671 ntBASIC3.22□□□□□ -1.89
LRRC53A6NM62 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.22□□□□□ -1.89
LRRC53A6NM62 AC010099.1-201ENST00000455434 375 ntBASIC3.22□□□□□ -1.89
LRRC53A6NM62 snoU13.28-201ENST00000459235 104 ntBASIC3.22□□□□□ -1.89
LRRC53A6NM62 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.22□□□□□ -1.89
LRRC53A6NM62 AC006512.1-201ENST00000468816 291 ntBASIC3.22□□□□□ -1.89
LRRC53A6NM62 AC034236.1-201ENST00000469891 373 ntBASIC3.22□□□□□ -1.89
LRRC53A6NM62 SNORA31.1-201ENST00000515993 133 ntBASIC3.22□□□□□ -1.89
LRRC53A6NM62 SNORA31.5-201ENST00000516190 133 ntBASIC3.22□□□□□ -1.89
LRRC53A6NM62 AP000867.2-201ENST00000532468 320 ntBASIC3.22□□□□□ -1.89
LRRC53A6NM62 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.22□□□□□ -1.89
LRRC53A6NM62 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LRRC53A6NM62 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LRRC53A6NM62 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.22□□□□□ -1.89
LRRC53A6NM62 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.22□□□□□ -1.89
LRRC53A6NM62 HMGB1P14-201ENST00000557424 591 ntBASIC3.22□□□□□ -1.89
LRRC53A6NM62 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.22□□□□□ -1.89
LRRC53A6NM62 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms