Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 MIR548P-201ENST00000408336 84 ntBASIC3.86□□□□□ -1.79
CCDC78A2IDD5 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.86□□□□□ -1.79
CCDC78A2IDD5 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC78A2IDD5 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.86□□□□□ -1.79
CCDC78A2IDD5 ATG3P1-201ENST00000419507 911 ntBASIC3.86□□□□□ -1.79
CCDC78A2IDD5 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.86□□□□□ -1.79
CCDC78A2IDD5 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.86□□□□□ -1.79
CCDC78A2IDD5 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC78A2IDD5 AC008264.1-201ENST00000447612 367 ntBASIC3.86□□□□□ -1.79
CCDC78A2IDD5 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.86□□□□□ -1.79
CCDC78A2IDD5 SNORA67.7-201ENST00000516664 135 ntBASIC3.86□□□□□ -1.79
CCDC78A2IDD5 RNU6-256P-201ENST00000516747 97 ntBASIC3.86□□□□□ -1.79
CCDC78A2IDD5 RNU6-677P-201ENST00000516914 101 ntBASIC3.86□□□□□ -1.79
CCDC78A2IDD5 RN7SKP258-201ENST00000517151 304 ntBASIC3.86□□□□□ -1.79
CCDC78A2IDD5 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC78A2IDD5 IGKV2-23-201ENST00000518729 323 ntBASIC3.86□□□□□ -1.79
CCDC78A2IDD5 RANP9-201ENST00000519957 271 ntBASIC3.86□□□□□ -1.79
CCDC78A2IDD5 IGKV2D-19-201ENST00000523346 262 ntBASIC3.86□□□□□ -1.79
CCDC78A2IDD5 AP006587.4-201ENST00000526053 529 ntBASIC3.86□□□□□ -1.79
CCDC78A2IDD5 AP005597.4-201ENST00000526762 229 ntBASIC3.86□□□□□ -1.79
CCDC78A2IDD5 AP000763.2-201ENST00000540641 163 ntBASIC3.86□□□□□ -1.79
CCDC78A2IDD5 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC78A2IDD5 IMMP1LP2-201ENST00000552954 492 ntBASIC3.86□□□□□ -1.79
CCDC78A2IDD5 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC78A2IDD5 FRG2DP-202ENST00000566967 323 ntBASIC3.86□□□□□ -1.79
CCDC78A2IDD5 RN7SL703P-201ENST00000578485 302 ntBASIC3.86□□□□□ -1.79
CCDC78A2IDD5 AC053481.4-201ENST00000583164 216 ntBASIC3.86□□□□□ -1.79
CCDC78A2IDD5 MIR3158-1-201ENST00000583596 81 ntBASIC3.86□□□□□ -1.79
CCDC78A2IDD5 AC023043.2-201ENST00000589678 1026 ntBASIC3.86□□□□□ -1.79
CCDC78A2IDD5 AC244505.7-201ENST00000599675 272 ntBASIC3.86□□□□□ -1.79
CCDC78A2IDD5 CTHRC1P1-201ENST00000605383 469 ntBASIC3.86□□□□□ -1.79
CCDC78A2IDD5 U2.17-201ENST00000611454 95 ntBASIC3.86□□□□□ -1.79
CCDC78A2IDD5 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC78A2IDD5 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC78A2IDD5 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC78A2IDD5 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CCDC78A2IDD5 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC78A2IDD5 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC78A2IDD5 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC78A2IDD5 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC78A2IDD5 RNU6-254P-201ENST00000363377 107 ntBASIC3.85□□□□□ -1.79
CCDC78A2IDD5 SNORA4.3-201ENST00000365564 137 ntBASIC3.85□□□□□ -1.79
CCDC78A2IDD5 Y_RNA.394-201ENST00000383942 103 ntBASIC3.85□□□□□ -1.79
CCDC78A2IDD5 RNU6-701P-201ENST00000384059 107 ntBASIC3.85□□□□□ -1.79
CCDC78A2IDD5 RNU6-76P-201ENST00000384060 104 ntBASIC3.85□□□□□ -1.79
CCDC78A2IDD5 RNU6-43P-201ENST00000384302 107 ntBASIC3.85□□□□□ -1.79
CCDC78A2IDD5 RNU6-434P-201ENST00000384376 107 ntBASIC3.85□□□□□ -1.79
CCDC78A2IDD5 RPL37P10-201ENST00000412884 288 ntBASIC3.85□□□□□ -1.79
CCDC78A2IDD5 AC104058.1-201ENST00000448028 297 ntBASIC3.85□□□□□ -1.79
CCDC78A2IDD5 RPS15AP27-201ENST00000449183 343 ntBASIC3.85□□□□□ -1.79
CCDC78A2IDD5 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC78A2IDD5 AC130509.1-201ENST00000464158 433 ntBASIC3.85□□□□□ -1.79
CCDC78A2IDD5 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC78A2IDD5 VN1R105P-201ENST00000486595 910 ntBASIC3.85□□□□□ -1.79
CCDC78A2IDD5 HMGB3P15-201ENST00000507326 574 ntBASIC3.85□□□□□ -1.79
CCDC78A2IDD5 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.85□□□□□ -1.79
CCDC78A2IDD5 SNORA31.3-201ENST00000516029 96 ntBASIC3.85□□□□□ -1.79
CCDC78A2IDD5 RNU6-1045P-201ENST00000516321 107 ntBASIC3.85□□□□□ -1.79
CCDC78A2IDD5 Y_RNA.682-201ENST00000516457 100 ntBASIC3.85□□□□□ -1.79
CCDC78A2IDD5 Y_RNA.718-201ENST00000517110 102 ntBASIC3.85□□□□□ -1.79
CCDC78A2IDD5 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC78A2IDD5 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CCDC78A2IDD5 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.85□□□□□ -1.79
CCDC78A2IDD5 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC78A2IDD5 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC78A2IDD5 AC020661.2-201ENST00000560114 134 ntBASIC3.85□□□□□ -1.79
CCDC78A2IDD5 ZNF192P1-203ENST00000565888 810 ntBASIC3.85□□□□□ -1.79
CCDC78A2IDD5 AC007151.1-201ENST00000572774 483 ntBASIC3.85□□□□□ -1.79
CCDC78A2IDD5 MIR3942-201ENST00000585264 109 ntBASIC3.85□□□□□ -1.79
CCDC78A2IDD5 BDH2P1-201ENST00000602288 736 ntBASIC3.85□□□□□ -1.79
CCDC78A2IDD5 DPPA3P3-201ENST00000603842 430 ntBASIC3.85□□□□□ -1.79
CCDC78A2IDD5 AL162730.1-201ENST00000605734 292 ntBASIC3.85□□□□□ -1.79
CCDC78A2IDD5 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC78A2IDD5 SDR42E1P2-201ENST00000614861 481 ntBASIC3.85□□□□□ -1.79
CCDC78A2IDD5 FP236240.3-201ENST00000623061 327 ntBASIC3.85□□□□□ -1.79
CCDC78A2IDD5 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC78A2IDD5 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC78A2IDD5 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC78A2IDD5 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC78A2IDD5 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC78A2IDD5 AC116096.1-201ENST00000566804 2314 ntBASIC3.84□□□□□ -1.79
CCDC78A2IDD5 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC78A2IDD5 MFSD8-236ENST00000641509 4050 ntBASIC3.84□□□□□ -1.79
CCDC78A2IDD5 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC78A2IDD5 SDAD1P2-201ENST00000441308 2028 ntBASIC3.84□□□□□ -1.79
CCDC78A2IDD5 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC78A2IDD5 RNU1-18P-201ENST00000363062 164 ntBASIC3.84□□□□□ -1.79
CCDC78A2IDD5 Y_RNA.138-201ENST00000363462 102 ntBASIC3.84□□□□□ -1.79
CCDC78A2IDD5 RNU6-593P-201ENST00000364716 112 ntBASIC3.84□□□□□ -1.79
CCDC78A2IDD5 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC78A2IDD5 DEFB109C-201ENST00000382575 264 ntBASIC3.84□□□□□ -1.79
CCDC78A2IDD5 DEFB109B-201ENST00000382656 264 ntBASIC3.84□□□□□ -1.79
CCDC78A2IDD5 RNU6-128P-201ENST00000383976 107 ntBASIC3.84□□□□□ -1.79
CCDC78A2IDD5 RNU6-190P-201ENST00000384154 102 ntBASIC3.84□□□□□ -1.79
CCDC78A2IDD5 MIR554-201ENST00000384874 96 ntBASIC3.84□□□□□ -1.79
CCDC78A2IDD5 MIR670-201ENST00000390142 98 ntBASIC3.84□□□□□ -1.79
CCDC78A2IDD5 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CCDC78A2IDD5 RNA5SP171-201ENST00000391071 115 ntBASIC3.84□□□□□ -1.79
CCDC78A2IDD5 HMGN2P8-201ENST00000391458 268 ntBASIC3.84□□□□□ -1.79
CCDC78A2IDD5 PTMAP5-201ENST00000393073 333 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms