Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SYCE3A1L190 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SYCE3A1L190 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.69□□□□□ -1.98
SYCE3A1L190 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.69□□□□□ -1.98
SYCE3A1L190 RNU6-188P-201ENST00000364207 107 ntBASIC2.69□□□□□ -1.98
SYCE3A1L190 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SYCE3A1L190 ELOCP17-201ENST00000414751 326 ntBASIC2.69□□□□□ -1.98
SYCE3A1L190 RPS27AP14-201ENST00000422868 454 ntBASIC2.69□□□□□ -1.98
SYCE3A1L190 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SYCE3A1L190 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.69□□□□□ -1.98
SYCE3A1L190 HMGB1P27-201ENST00000431429 603 ntBASIC2.69□□□□□ -1.98
SYCE3A1L190 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.69□□□□□ -1.98
SYCE3A1L190 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.69□□□□□ -1.98
SYCE3A1L190 RPL37P6-201ENST00000460682 294 ntBASIC2.69□□□□□ -1.98
SYCE3A1L190 S100A11P2-201ENST00000467589 312 ntBASIC2.69□□□□□ -1.98
SYCE3A1L190 AC096725.1-201ENST00000514266 313 ntBASIC2.69□□□□□ -1.98
SYCE3A1L190 RNA5SP320-201ENST00000516263 124 ntBASIC2.69□□□□□ -1.98
SYCE3A1L190 SNORA31.18-201ENST00000517043 134 ntBASIC2.69□□□□□ -1.98
SYCE3A1L190 AP003461.1-201ENST00000528866 78 ntBASIC2.69□□□□□ -1.98
SYCE3A1L190 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.69□□□□□ -1.98
SYCE3A1L190 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.69□□□□□ -1.98
SYCE3A1L190 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.69□□□□□ -1.98
SYCE3A1L190 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.69□□□□□ -1.98
SYCE3A1L190 AC008751.2-201ENST00000597885 980 ntBASIC2.69□□□□□ -1.98
SYCE3A1L190 RPL12P50-201ENST00000603116 116 ntBASIC2.69□□□□□ -1.98
SYCE3A1L190 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SYCE3A1L190 MIR3199-2-201ENST00000636243 86 ntBASIC2.69□□□□□ -1.98
SYCE3A1L190 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SYCE3A1L190 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.69□□□□□ -1.98
SYCE3A1L190 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SYCE3A1L190 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SYCE3A1L190 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.69□□□□□ -1.98
SYCE3A1L190 AC004520.1-201ENST00000608362 1413 ntBASIC2.68□□□□□ -1.98
SYCE3A1L190 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SYCE3A1L190 NACAP2-201ENST00000318548 624 ntBASIC2.68□□□□□ -1.98
SYCE3A1L190 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SYCE3A1L190 RNY3P13-201ENST00000365542 102 ntBASIC2.68□□□□□ -1.98
SYCE3A1L190 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
SYCE3A1L190 RNU6-1072P-201ENST00000384703 107 ntBASIC2.68□□□□□ -1.98
SYCE3A1L190 RNU6-443P-201ENST00000384780 107 ntBASIC2.68□□□□□ -1.98
SYCE3A1L190 MIR634-201ENST00000385208 97 ntBASIC2.68□□□□□ -1.98
SYCE3A1L190 RPL17P50-201ENST00000396131 546 ntBASIC2.68□□□□□ -1.98
SYCE3A1L190 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.68□□□□□ -1.98
SYCE3A1L190 AL353729.1-201ENST00000425044 720 ntBASIC2.68□□□□□ -1.98
SYCE3A1L190 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.68□□□□□ -1.98
SYCE3A1L190 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.68□□□□□ -1.98
SYCE3A1L190 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.68□□□□□ -1.98
SYCE3A1L190 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.68□□□□□ -1.98
SYCE3A1L190 RBM43P1-201ENST00000476891 1081 ntBASIC2.68□□□□□ -1.98
SYCE3A1L190 LINC00888-204ENST00000487386 421 ntBASIC2.68□□□□□ -1.98
SYCE3A1L190 AC139453.3-201ENST00000493276 369 ntBASIC2.68□□□□□ -1.98
SYCE3A1L190 NDUFB4P2-201ENST00000509515 391 ntBASIC2.68□□□□□ -1.98
SYCE3A1L190 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.68□□□□□ -1.98
SYCE3A1L190 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.68□□□□□ -1.98
SYCE3A1L190 RN7SKP24-201ENST00000515888 284 ntBASIC2.68□□□□□ -1.98
SYCE3A1L190 SNORA31.6-201ENST00000516241 130 ntBASIC2.68□□□□□ -1.98
SYCE3A1L190 SNORD19.2-201ENST00000516978 73 ntBASIC2.68□□□□□ -1.98
SYCE3A1L190 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.68□□□□□ -1.98
SYCE3A1L190 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.68□□□□□ -1.98
SYCE3A1L190 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.68□□□□□ -1.98
SYCE3A1L190 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.68□□□□□ -1.98
SYCE3A1L190 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.68□□□□□ -1.98
SYCE3A1L190 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.68□□□□□ -1.98
SYCE3A1L190 AC005261.5-201ENST00000596280 355 ntBASIC2.68□□□□□ -1.98
SYCE3A1L190 AC140725.3-201ENST00000616193 880 ntBASIC2.68□□□□□ -1.98
SYCE3A1L190 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.68□□□□□ -1.98
SYCE3A1L190 AC007998.5-201ENST00000622938 237 ntBASIC2.68□□□□□ -1.98
SYCE3A1L190 AL137790.1-201ENST00000634283 177 ntBASIC2.68□□□□□ -1.98
SYCE3A1L190 CKAP2P1-201ENST00000555477 2049 ntBASIC2.68□□□□□ -1.98
SYCE3A1L190 AC080128.1-201ENST00000474389 1917 ntBASIC2.68□□□□□ -1.98
SYCE3A1L190 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SYCE3A1L190 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.67□□□□□ -1.98
SYCE3A1L190 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SYCE3A1L190 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.67□□□□□ -1.98
SYCE3A1L190 MIRLET7G-201ENST00000362280 84 ntBASIC2.67□□□□□ -1.98
SYCE3A1L190 RNU6-511P-201ENST00000363496 107 ntBASIC2.67□□□□□ -1.98
SYCE3A1L190 RNU6-1083P-201ENST00000384022 107 ntBASIC2.67□□□□□ -1.98
SYCE3A1L190 MIR27B-201ENST00000385129 97 ntBASIC2.67□□□□□ -1.98
SYCE3A1L190 RNU6-817P-201ENST00000391083 104 ntBASIC2.67□□□□□ -1.98
SYCE3A1L190 AL139039.1-201ENST00000401900 692 ntBASIC2.67□□□□□ -1.98
SYCE3A1L190 RNU2-62P-201ENST00000410868 191 ntBASIC2.67□□□□□ -1.98
SYCE3A1L190 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.67□□□□□ -1.98
SYCE3A1L190 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.67□□□□□ -1.98
SYCE3A1L190 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.67□□□□□ -1.98
SYCE3A1L190 NEFMP1-201ENST00000443423 1006 ntBASIC2.67□□□□□ -1.98
SYCE3A1L190 AC104389.3-201ENST00000445629 235 ntBASIC2.67□□□□□ -1.98
SYCE3A1L190 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.67□□□□□ -1.98
SYCE3A1L190 SNORD97-201ENST00000459187 142 ntBASIC2.67□□□□□ -1.98
SYCE3A1L190 AC072039.1-201ENST00000477611 581 ntBASIC2.67□□□□□ -1.98
SYCE3A1L190 AC104435.1-201ENST00000483483 166 ntBASIC2.67□□□□□ -1.98
SYCE3A1L190 RPL39P36-201ENST00000490784 156 ntBASIC2.67□□□□□ -1.98
SYCE3A1L190 GZMAP1-201ENST00000503054 631 ntBASIC2.67□□□□□ -1.98
SYCE3A1L190 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.67□□□□□ -1.98
SYCE3A1L190 AC008716.1-201ENST00000511084 513 ntBASIC2.67□□□□□ -1.98
SYCE3A1L190 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.67□□□□□ -1.98
SYCE3A1L190 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
SYCE3A1L190 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.67□□□□□ -1.98
SYCE3A1L190 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.67□□□□□ -1.98
SYCE3A1L190 LARP7P3-201ENST00000579888 337 ntBASIC2.67□□□□□ -1.98
SYCE3A1L190 AC024619.4-201ENST00000580924 316 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 154.2 ms