Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
DDX49Q9Y6V7 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
DDX49Q9Y6V7 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
DDX49Q9Y6V7 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
DDX49Q9Y6V7 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.59□□□□□ -1.99
DDX49Q9Y6V7 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
DDX49Q9Y6V7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
DDX49Q9Y6V7 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
DDX49Q9Y6V7 Y_RNA.245-201ENST00000364493 95 ntBASIC2.59□□□□□ -1.99
DDX49Q9Y6V7 MIR218-1-201ENST00000384999 110 ntBASIC2.59□□□□□ -1.99
DDX49Q9Y6V7 RNU4-72P-201ENST00000410754 173 ntBASIC2.59□□□□□ -1.99
DDX49Q9Y6V7 MED14P1-201ENST00000430517 648 ntBASIC2.59□□□□□ -1.99
DDX49Q9Y6V7 HMGN2P3-201ENST00000433603 273 ntBASIC2.59□□□□□ -1.99
DDX49Q9Y6V7 HMGN2P5-201ENST00000436882 273 ntBASIC2.59□□□□□ -1.99
DDX49Q9Y6V7 PTENP1-201ENST00000447117 1215 ntBASIC2.59□□□□□ -1.99
DDX49Q9Y6V7 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.59□□□□□ -1.99
DDX49Q9Y6V7 RNU6-717P-201ENST00000459076 104 ntBASIC2.59□□□□□ -1.99
DDX49Q9Y6V7 Y_RNA.638-201ENST00000459374 113 ntBASIC2.59□□□□□ -1.99
DDX49Q9Y6V7 MTND5P13-201ENST00000513046 1079 ntBASIC2.59□□□□□ -1.99
DDX49Q9Y6V7 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
DDX49Q9Y6V7 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.59□□□□□ -1.99
DDX49Q9Y6V7 MIR4769-201ENST00000584126 77 ntBASIC2.59□□□□□ -1.99
DDX49Q9Y6V7 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.59□□□□□ -1.99
DDX49Q9Y6V7 BNIP3P10-201ENST00000605360 577 ntBASIC2.59□□□□□ -1.99
DDX49Q9Y6V7 AC080013.3-201ENST00000606839 578 ntBASIC2.59□□□□□ -1.99
DDX49Q9Y6V7 HMGB1P24-202ENST00000615653 685 ntBASIC2.59□□□□□ -1.99
DDX49Q9Y6V7 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.59□□□□□ -1.99
DDX49Q9Y6V7 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.59□□□□□ -1.99
DDX49Q9Y6V7 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.59□□□□□ -1.99
DDX49Q9Y6V7 PCMTD1P7-201ENST00000634506 357 ntBASIC2.59□□□□□ -1.99
DDX49Q9Y6V7 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
DDX49Q9Y6V7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
DDX49Q9Y6V7 AC104454.1-201ENST00000421341 1401 ntBASIC2.59□□□□□ -2
DDX49Q9Y6V7 AC004520.1-201ENST00000608362 1413 ntBASIC2.59□□□□□ -2
DDX49Q9Y6V7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.58□□□□□ -2
DDX49Q9Y6V7 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
DDX49Q9Y6V7 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.58□□□□□ -2
DDX49Q9Y6V7 RNU6-253P-201ENST00000384730 105 ntBASIC2.58□□□□□ -2
DDX49Q9Y6V7 MIR122-201ENST00000385044 85 ntBASIC2.58□□□□□ -2
DDX49Q9Y6V7 MIR504-201ENST00000385065 83 ntBASIC2.58□□□□□ -2
DDX49Q9Y6V7 RNU6-1242P-201ENST00000391052 103 ntBASIC2.58□□□□□ -2
DDX49Q9Y6V7 RNU6-1328P-201ENST00000410938 106 ntBASIC2.58□□□□□ -2
DDX49Q9Y6V7 RN7SKP192-201ENST00000411291 327 ntBASIC2.58□□□□□ -2
DDX49Q9Y6V7 HMGB1P11-201ENST00000413899 637 ntBASIC2.58□□□□□ -2
DDX49Q9Y6V7 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.58□□□□□ -2
DDX49Q9Y6V7 AC083875.1-201ENST00000419509 405 ntBASIC2.58□□□□□ -2
DDX49Q9Y6V7 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.58□□□□□ -2
DDX49Q9Y6V7 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.58□□□□□ -2
DDX49Q9Y6V7 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.58□□□□□ -2
DDX49Q9Y6V7 AL356320.1-201ENST00000429616 163 ntBASIC2.58□□□□□ -2
DDX49Q9Y6V7 Z98742.2-201ENST00000431564 187 ntBASIC2.58□□□□□ -2
DDX49Q9Y6V7 SNRPEP9-201ENST00000436794 238 ntBASIC2.58□□□□□ -2
DDX49Q9Y6V7 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.58□□□□□ -2
DDX49Q9Y6V7 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.58□□□□□ -2
DDX49Q9Y6V7 AC107626.1-201ENST00000471084 183 ntBASIC2.58□□□□□ -2
DDX49Q9Y6V7 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.58□□□□□ -2
DDX49Q9Y6V7 AC098591.2-201ENST00000510152 315 ntBASIC2.58□□□□□ -2
DDX49Q9Y6V7 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.58□□□□□ -2
DDX49Q9Y6V7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.58□□□□□ -2
DDX49Q9Y6V7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.58□□□□□ -2
DDX49Q9Y6V7 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.58□□□□□ -2
DDX49Q9Y6V7 AP000403.1-201ENST00000603349 851 ntBASIC2.58□□□□□ -2
DDX49Q9Y6V7 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.58□□□□□ -2
DDX49Q9Y6V7 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.58□□□□□ -2
DDX49Q9Y6V7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.58□□□□□ -2
DDX49Q9Y6V7 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.58□□□□□ -2
DDX49Q9Y6V7 AC080128.1-201ENST00000474389 1917 ntBASIC2.58□□□□□ -2
DDX49Q9Y6V7 AC009902.3-201ENST00000606235 2172 ntBASIC2.57□□□□□ -2
DDX49Q9Y6V7 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
DDX49Q9Y6V7 AL596028.1-201ENST00000326971 197 ntBASIC2.57□□□□□ -2
DDX49Q9Y6V7 RNU4-68P-201ENST00000364314 141 ntBASIC2.57□□□□□ -2
DDX49Q9Y6V7 MIR888-201ENST00000401186 77 ntBASIC2.57□□□□□ -2
DDX49Q9Y6V7 AL135786.1-201ENST00000415892 214 ntBASIC2.57□□□□□ -2
DDX49Q9Y6V7 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.57□□□□□ -2
DDX49Q9Y6V7 ELOCP30-201ENST00000447108 299 ntBASIC2.57□□□□□ -2
DDX49Q9Y6V7 MTCO1P27-201ENST00000448269 226 ntBASIC2.57□□□□□ -2
DDX49Q9Y6V7 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.57□□□□□ -2
DDX49Q9Y6V7 AC109486.1-201ENST00000486833 374 ntBASIC2.57□□□□□ -2
DDX49Q9Y6V7 RPS27AP10-201ENST00000496103 208 ntBASIC2.57□□□□□ -2
DDX49Q9Y6V7 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.57□□□□□ -2
DDX49Q9Y6V7 SNORA31.18-201ENST00000517043 134 ntBASIC2.57□□□□□ -2
DDX49Q9Y6V7 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.57□□□□□ -2
DDX49Q9Y6V7 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.57□□□□□ -2
DDX49Q9Y6V7 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.57□□□□□ -2
DDX49Q9Y6V7 AL133153.1-201ENST00000557756 303 ntBASIC2.57□□□□□ -2
DDX49Q9Y6V7 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.57□□□□□ -2
DDX49Q9Y6V7 RPS3AP23-202ENST00000574601 686 ntBASIC2.57□□□□□ -2
DDX49Q9Y6V7 MIR4524B-201ENST00000581569 115 ntBASIC2.57□□□□□ -2
DDX49Q9Y6V7 MIR5007-201ENST00000583098 95 ntBASIC2.57□□□□□ -2
DDX49Q9Y6V7 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
DDX49Q9Y6V7 AC025811.1-201ENST00000604312 472 ntBASIC2.57□□□□□ -2
DDX49Q9Y6V7 AC006386.1-201ENST00000619436 415 ntBASIC2.57□□□□□ -2
DDX49Q9Y6V7 AC009269.6-201ENST00000621778 588 ntBASIC2.57□□□□□ -2
DDX49Q9Y6V7 MIR6873-201ENST00000622788 63 ntBASIC2.57□□□□□ -2
DDX49Q9Y6V7 DDX43P2-201ENST00000604753 1354 ntBASIC2.57□□□□□ -2
DDX49Q9Y6V7 AC099786.3-201ENST00000565735 1410 ntBASIC2.57□□□□□ -2
DDX49Q9Y6V7 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
DDX49Q9Y6V7 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.57□□□□□ -2
DDX49Q9Y6V7 RNU6-223P-201ENST00000362830 107 ntBASIC2.56□□□□□ -2
DDX49Q9Y6V7 RNA5SP338-201ENST00000410495 85 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms