Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RPL23AP88-201ENST00000605759 454 ntBASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 Z73965.1-201ENST00000623412 2297 ntBASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 OR51H2P-202ENST00000641424 3046 ntBASIC4.97□□□□□ -1.61
PCDHGA11Q9Y5H2 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
PCDHGA11Q9Y5H2 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.96□□□□□ -1.61
PCDHGA11Q9Y5H2 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
PCDHGA11Q9Y5H2 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 RN7SKP113-201ENST00000363891 295 ntBASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 RNU6-1286P-201ENST00000383871 107 ntBASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 RNU6-926P-201ENST00000384075 107 ntBASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 RN7SKP114-201ENST00000410327 279 ntBASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 RNA5SP31-201ENST00000411144 127 ntBASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 RN7SL515P-201ENST00000463999 297 ntBASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 RPS21P4-201ENST00000487122 248 ntBASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 HMGB3P16-201ENST00000508037 287 ntBASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 SNORA43.2-201ENST00000516652 128 ntBASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 RNU2-31P-201ENST00000516954 155 ntBASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 AC087441.2-201ENST00000529141 262 ntBASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 AC024940.3-201ENST00000538551 316 ntBASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 LINC00933-203ENST00000559812 219 ntBASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 AC011445.2-201ENST00000599274 173 ntBASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 AC118273.1-201ENST00000525324 3006 ntBASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 AC007390.2-201ENST00000606229 3803 ntBASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.96□□□□□ -1.62
PCDHGA11Q9Y5H2 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 ZNF826P-207ENST00000622273 1910 ntBASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 RNA5SP435-201ENST00000364044 108 ntBASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 RNU6-187P-201ENST00000384139 106 ntBASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 UBA52P6-201ENST00000399822 382 ntBASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 CHEK2P5-201ENST00000423877 246 ntBASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 AL391987.1-201ENST00000441025 200 ntBASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 RNA5SP360-201ENST00000516555 118 ntBASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 RNU6-255P-201ENST00000516957 105 ntBASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 IGKV2-18-201ENST00000522607 343 ntBASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 RN7SL435P-201ENST00000584418 282 ntBASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 AC241585.2-209ENST00000638217 143 ntBASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 AC132825.6-201ENST00000638861 357 ntBASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.95□□□□□ -1.62
PCDHGA11Q9Y5H2 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 Y_RNA.76-201ENST00000362931 109 ntBASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 SNORA17.1-201ENST00000362945 126 ntBASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 RNU6-142P-201ENST00000384019 107 ntBASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 Y_RNA.504-201ENST00000384481 104 ntBASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 RNU6-541P-201ENST00000384709 110 ntBASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 RPS4XP3-201ENST00000398541 413 ntBASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 MIR548I2-201ENST00000408348 149 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms