Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC006548.1-201ENST00000427470 102 ntBASIC1.37□□□□□ -2.19
SHANK2Q9UPX8 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.37□□□□□ -2.19
SHANK2Q9UPX8 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.37□□□□□ -2.19
SHANK2Q9UPX8 CR381572.1-201ENST00000625098 102 ntBASIC1.37□□□□□ -2.19
SHANK2Q9UPX8 AC087359.1-201ENST00000508335 1740 ntBASIC1.37□□□□□ -2.19
SHANK2Q9UPX8 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
SHANK2Q9UPX8 AC008850.1-201ENST00000427546 362 ntBASIC1.37□□□□□ -2.19
SHANK2Q9UPX8 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.37□□□□□ -2.19
SHANK2Q9UPX8 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
SHANK2Q9UPX8 AC107032.1-201ENST00000485945 480 ntBASIC1.37□□□□□ -2.19
SHANK2Q9UPX8 RNU6-1004P-201ENST00000516584 111 ntBASIC1.37□□□□□ -2.19
SHANK2Q9UPX8 RNU6-928P-201ENST00000516876 104 ntBASIC1.37□□□□□ -2.19
SHANK2Q9UPX8 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.37□□□□□ -2.19
SHANK2Q9UPX8 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.37□□□□□ -2.19
SHANK2Q9UPX8 AC079395.3-201ENST00000615161 484 ntBASIC1.37□□□□□ -2.19
SHANK2Q9UPX8 AC003001.2-201ENST00000616294 831 ntBASIC1.37□□□□□ -2.19
SHANK2Q9UPX8 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SHANK2Q9UPX8 AL133384.1-201ENST00000412744 351 ntBASIC1.36□□□□□ -2.19
SHANK2Q9UPX8 HMGB3P31-201ENST00000413333 595 ntBASIC1.36□□□□□ -2.19
SHANK2Q9UPX8 AL161449.1-201ENST00000414531 1199 ntBASIC1.36□□□□□ -2.19
SHANK2Q9UPX8 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.36□□□□□ -2.19
SHANK2Q9UPX8 OFD1P18Y-201ENST00000420889 959 ntBASIC1.36□□□□□ -2.19
SHANK2Q9UPX8 RPL7P34-201ENST00000433316 712 ntBASIC1.36□□□□□ -2.19
SHANK2Q9UPX8 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.36□□□□□ -2.19
SHANK2Q9UPX8 AC005410.1-202ENST00000460347 485 ntBASIC1.36□□□□□ -2.19
SHANK2Q9UPX8 LRRC34P2-201ENST00000514850 553 ntBASIC1.36□□□□□ -2.19
SHANK2Q9UPX8 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.36□□□□□ -2.19
SHANK2Q9UPX8 XIAPP1-201ENST00000603162 600 ntBASIC1.36□□□□□ -2.19
SHANK2Q9UPX8 AL360181.4-201ENST00000621752 134 ntBASIC1.36□□□□□ -2.19
SHANK2Q9UPX8 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
SHANK2Q9UPX8 Y_RNA.471-201ENST00000384312 102 ntBASIC1.35□□□□□ -2.19
SHANK2Q9UPX8 U3.20-201ENST00000390909 217 ntBASIC1.35□□□□□ -2.19
SHANK2Q9UPX8 CIR1P3-201ENST00000405137 479 ntBASIC1.35□□□□□ -2.19
SHANK2Q9UPX8 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
SHANK2Q9UPX8 AC004941.2-201ENST00000427009 228 ntBASIC1.35□□□□□ -2.19
SHANK2Q9UPX8 AC079780.1-201ENST00000428259 207 ntBASIC1.35□□□□□ -2.19
SHANK2Q9UPX8 AL034418.1-201ENST00000448675 860 ntBASIC1.35□□□□□ -2.19
SHANK2Q9UPX8 PMCHL2-203ENST00000457791 237 ntBASIC1.35□□□□□ -2.19
SHANK2Q9UPX8 CBX3P7-201ENST00000532876 502 ntBASIC1.35□□□□□ -2.19
SHANK2Q9UPX8 SNRPGP16-201ENST00000533275 226 ntBASIC1.35□□□□□ -2.19
SHANK2Q9UPX8 AC074029.2-201ENST00000551045 634 ntBASIC1.35□□□□□ -2.19
SHANK2Q9UPX8 ZNF92P3-201ENST00000596594 954 ntBASIC1.35□□□□□ -2.19
SHANK2Q9UPX8 GAS5-AS1-201ENST00000602767 694 ntBASIC1.35□□□□□ -2.19
SHANK2Q9UPX8 AC106900.2-201ENST00000604994 317 ntBASIC1.35□□□□□ -2.19
SHANK2Q9UPX8 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
SHANK2Q9UPX8 CCT4P2-201ENST00000233836 1548 ntBASIC1.34□□□□□ -2.19
SHANK2Q9UPX8 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.34□□□□□ -2.19
SHANK2Q9UPX8 Y_RNA.62-201ENST00000362840 99 ntBASIC1.34□□□□□ -2.19
SHANK2Q9UPX8 RNU6-17P-201ENST00000384245 107 ntBASIC1.34□□□□□ -2.19
SHANK2Q9UPX8 RNU6-18P-201ENST00000384527 107 ntBASIC1.34□□□□□ -2.19
SHANK2Q9UPX8 RNU6-955P-201ENST00000410497 104 ntBASIC1.34□□□□□ -2.19
SHANK2Q9UPX8 RNU4-78P-201ENST00000410940 126 ntBASIC1.34□□□□□ -2.19
SHANK2Q9UPX8 RNA5SP127-201ENST00000411051 133 ntBASIC1.34□□□□□ -2.19
SHANK2Q9UPX8 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.34□□□□□ -2.19
SHANK2Q9UPX8 RPS15AP27-201ENST00000449183 343 ntBASIC1.34□□□□□ -2.19
SHANK2Q9UPX8 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.34□□□□□ -2.19
SHANK2Q9UPX8 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.34□□□□□ -2.19
SHANK2Q9UPX8 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.34□□□□□ -2.19
SHANK2Q9UPX8 AC103833.1-201ENST00000517442 172 ntBASIC1.34□□□□□ -2.19
SHANK2Q9UPX8 AC090666.1-201ENST00000578241 445 ntBASIC1.34□□□□□ -2.19
SHANK2Q9UPX8 MIR3609-201ENST00000582661 80 ntBASIC1.34□□□□□ -2.19
SHANK2Q9UPX8 AC096720.1-201ENST00000604441 183 ntBASIC1.34□□□□□ -2.19
SHANK2Q9UPX8 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC1.33□□□□□ -2.2
SHANK2Q9UPX8 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
SHANK2Q9UPX8 SEPT2P1-201ENST00000419651 180 ntBASIC1.33□□□□□ -2.2
SHANK2Q9UPX8 SDAD1P3-201ENST00000427380 333 ntBASIC1.33□□□□□ -2.2
SHANK2Q9UPX8 RPL7L1P10-201ENST00000427790 463 ntBASIC1.33□□□□□ -2.2
SHANK2Q9UPX8 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.33□□□□□ -2.2
SHANK2Q9UPX8 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.33□□□□□ -2.2
SHANK2Q9UPX8 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.33□□□□□ -2.2
SHANK2Q9UPX8 AC093752.1-206ENST00000511823 336 ntBASIC1.33□□□□□ -2.2
SHANK2Q9UPX8 AC008676.3-201ENST00000521237 435 ntBASIC1.33□□□□□ -2.2
SHANK2Q9UPX8 DEFB108E-201ENST00000524692 240 ntBASIC1.33□□□□□ -2.2
SHANK2Q9UPX8 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC1.33□□□□□ -2.2
SHANK2Q9UPX8 MIR4698-201ENST00000577795 80 ntBASIC1.33□□□□□ -2.2
SHANK2Q9UPX8 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.33□□□□□ -2.2
SHANK2Q9UPX8 AP001330.4-201ENST00000604350 154 ntBASIC1.33□□□□□ -2.2
SHANK2Q9UPX8 RNU5D-1-201ENST00000363299 116 ntBASIC1.32□□□□□ -2.2
SHANK2Q9UPX8 RNU6-263P-201ENST00000363811 107 ntBASIC1.32□□□□□ -2.2
SHANK2Q9UPX8 RNU6-1243P-201ENST00000364028 107 ntBASIC1.32□□□□□ -2.2
SHANK2Q9UPX8 SNORA16B-201ENST00000364674 135 ntBASIC1.32□□□□□ -2.2
SHANK2Q9UPX8 RNU6-185P-201ENST00000384421 107 ntBASIC1.32□□□□□ -2.2
SHANK2Q9UPX8 MT-TC-201ENST00000387405 66 ntBASIC1.32□□□□□ -2.2
SHANK2Q9UPX8 U3.29-201ENST00000391296 212 ntBASIC1.32□□□□□ -2.2
SHANK2Q9UPX8 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.32□□□□□ -2.2
SHANK2Q9UPX8 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.32□□□□□ -2.2
SHANK2Q9UPX8 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SHANK2Q9UPX8 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.32□□□□□ -2.2
SHANK2Q9UPX8 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC1.32□□□□□ -2.2
SHANK2Q9UPX8 BX248409.1-201ENST00000455497 255 ntBASIC1.32□□□□□ -2.2
SHANK2Q9UPX8 AC104689.1-201ENST00000473356 768 ntBASIC1.32□□□□□ -2.2
SHANK2Q9UPX8 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.32□□□□□ -2.2
SHANK2Q9UPX8 AC016065.2-201ENST00000514530 444 ntBASIC1.32□□□□□ -2.2
SHANK2Q9UPX8 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.32□□□□□ -2.2
SHANK2Q9UPX8 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.32□□□□□ -2.2
SHANK2Q9UPX8 AC087465.1-201ENST00000560574 245 ntBASIC1.32□□□□□ -2.2
SHANK2Q9UPX8 AL109918.3-201ENST00000603072 338 ntBASIC1.32□□□□□ -2.2
SHANK2Q9UPX8 AC012443.1-201ENST00000605605 231 ntBASIC1.32□□□□□ -2.2
SHANK2Q9UPX8 SNORD14A-201ENST00000606526 91 ntBASIC1.32□□□□□ -2.2
SHANK2Q9UPX8 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms