Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ZNRF3Q9ULT6 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.72□□□□□ -1.65
ZNRF3Q9ULT6 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
ZNRF3Q9ULT6 RNU1-15P-201ENST00000353977 144 ntBASIC4.72□□□□□ -1.65
ZNRF3Q9ULT6 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.72□□□□□ -1.65
ZNRF3Q9ULT6 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.72□□□□□ -1.65
ZNRF3Q9ULT6 ATG3P1-201ENST00000419507 911 ntBASIC4.72□□□□□ -1.65
ZNRF3Q9ULT6 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.72□□□□□ -1.65
ZNRF3Q9ULT6 AL359672.1-201ENST00000442302 409 ntBASIC4.72□□□□□ -1.65
ZNRF3Q9ULT6 HMGB3P22-202ENST00000451823 572 ntBASIC4.72□□□□□ -1.65
ZNRF3Q9ULT6 FGF7P3-201ENST00000454645 303 ntBASIC4.72□□□□□ -1.65
ZNRF3Q9ULT6 RPS26P28-201ENST00000470806 348 ntBASIC4.72□□□□□ -1.65
ZNRF3Q9ULT6 AP000926.1-201ENST00000479573 241 ntBASIC4.72□□□□□ -1.65
ZNRF3Q9ULT6 AC092451.1-201ENST00000480211 153 ntBASIC4.72□□□□□ -1.65
ZNRF3Q9ULT6 AC116337.1-201ENST00000509680 687 ntBASIC4.72□□□□□ -1.65
ZNRF3Q9ULT6 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.72□□□□□ -1.65
ZNRF3Q9ULT6 RN7SKP18-201ENST00000516005 275 ntBASIC4.72□□□□□ -1.65
ZNRF3Q9ULT6 RNU6-143P-201ENST00000516942 93 ntBASIC4.72□□□□□ -1.65
ZNRF3Q9ULT6 AC069113.1-201ENST00000517763 267 ntBASIC4.72□□□□□ -1.65
ZNRF3Q9ULT6 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ZNRF3Q9ULT6 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.72□□□□□ -1.65
ZNRF3Q9ULT6 AC022968.1-201ENST00000567372 442 ntBASIC4.72□□□□□ -1.65
ZNRF3Q9ULT6 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.72□□□□□ -1.65
ZNRF3Q9ULT6 AP001836.1-201ENST00000604675 523 ntBASIC4.72□□□□□ -1.65
ZNRF3Q9ULT6 AC116312.1-201ENST00000606841 314 ntBASIC4.72□□□□□ -1.65
ZNRF3Q9ULT6 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.72□□□□□ -1.65
ZNRF3Q9ULT6 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.72□□□□□ -1.65
ZNRF3Q9ULT6 BMS1P21-201ENST00000634565 365 ntBASIC4.72□□□□□ -1.65
ZNRF3Q9ULT6 AL669831.3-213ENST00000636676 183 ntBASIC4.72□□□□□ -1.65
ZNRF3Q9ULT6 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ZNRF3Q9ULT6 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
ZNRF3Q9ULT6 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.71□□□□□ -1.66
ZNRF3Q9ULT6 KPNA2P1-201ENST00000458289 1591 ntBASIC4.71□□□□□ -1.66
ZNRF3Q9ULT6 AC007823.1-201ENST00000569932 1566 ntBASIC4.71□□□□□ -1.66
ZNRF3Q9ULT6 DEFB108F-201ENST00000344638 222 ntBASIC4.71□□□□□ -1.66
ZNRF3Q9ULT6 RNU6-266P-201ENST00000364225 107 ntBASIC4.71□□□□□ -1.66
ZNRF3Q9ULT6 RNU6-639P-201ENST00000384074 107 ntBASIC4.71□□□□□ -1.66
ZNRF3Q9ULT6 RNU6-1181P-201ENST00000384191 106 ntBASIC4.71□□□□□ -1.66
ZNRF3Q9ULT6 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
ZNRF3Q9ULT6 NDUFB4P4-201ENST00000404822 243 ntBASIC4.71□□□□□ -1.66
ZNRF3Q9ULT6 Z92545.1-201ENST00000411782 234 ntBASIC4.71□□□□□ -1.66
ZNRF3Q9ULT6 RPL21P90-201ENST00000415692 466 ntBASIC4.71□□□□□ -1.66
ZNRF3Q9ULT6 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.71□□□□□ -1.66
ZNRF3Q9ULT6 MTCO3P10-201ENST00000455912 772 ntBASIC4.71□□□□□ -1.66
ZNRF3Q9ULT6 AC087884.1-201ENST00000469738 328 ntBASIC4.71□□□□□ -1.66
ZNRF3Q9ULT6 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.71□□□□□ -1.66
ZNRF3Q9ULT6 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.71□□□□□ -1.66
ZNRF3Q9ULT6 SNRPGP16-201ENST00000533275 226 ntBASIC4.71□□□□□ -1.66
ZNRF3Q9ULT6 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.71□□□□□ -1.66
ZNRF3Q9ULT6 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.71□□□□□ -1.66
ZNRF3Q9ULT6 AC025423.5-201ENST00000550230 219 ntBASIC4.71□□□□□ -1.66
ZNRF3Q9ULT6 AC026371.1-201ENST00000551867 419 ntBASIC4.71□□□□□ -1.66
ZNRF3Q9ULT6 MIR548AC-201ENST00000585049 88 ntBASIC4.71□□□□□ -1.66
ZNRF3Q9ULT6 AC244505.7-201ENST00000599675 272 ntBASIC4.71□□□□□ -1.66
ZNRF3Q9ULT6 AC019193.3-201ENST00000609144 554 ntBASIC4.71□□□□□ -1.66
ZNRF3Q9ULT6 AC107294.1-201ENST00000609524 467 ntBASIC4.71□□□□□ -1.66
ZNRF3Q9ULT6 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.71□□□□□ -1.66
ZNRF3Q9ULT6 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ZNRF3Q9ULT6 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.71□□□□□ -1.66
ZNRF3Q9ULT6 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ZNRF3Q9ULT6 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ZNRF3Q9ULT6 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
ZNRF3Q9ULT6 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ZNRF3Q9ULT6 OR4G2P-202ENST00000641004 1759 ntBASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 UBE2L2-201ENST00000254302 429 ntBASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 RNU4-44P-201ENST00000363050 141 ntBASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 SNORA63C-201ENST00000364578 129 ntBASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 RNA5SP51-201ENST00000364750 119 ntBASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 MIR218-2-201ENST00000385006 110 ntBASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 GPM6BP2-201ENST00000432046 144 ntBASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 GPM6BP1-201ENST00000446387 144 ntBASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 CYCSP35-201ENST00000451978 304 ntBASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 SMURF2P1-201ENST00000514992 481 ntBASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 RNU6-988P-201ENST00000519081 107 ntBASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 AC002044.1-201ENST00000606707 158 ntBASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 AC131238.1-201ENST00000617135 328 ntBASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 AL360181.4-201ENST00000621752 134 ntBASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 AL512643.1-201ENST00000635735 524 ntBASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms