Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
CDC42EP3Q9UKI2 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CDC42EP3Q9UKI2 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.87□□□□□ -1.79
CDC42EP3Q9UKI2 MAPK10-303ENST00000641324 3959 ntBASIC3.87□□□□□ -1.79
CDC42EP3Q9UKI2 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC3.87□□□□□ -1.79
CDC42EP3Q9UKI2 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 AC091812.1-201ENST00000432235 1948 ntBASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 RNU6-384P-201ENST00000364900 104 ntBASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 MIR124-3-201ENST00000384866 87 ntBASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 AL357515.1-201ENST00000402967 542 ntBASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 AL096701.2-201ENST00000416920 238 ntBASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 TOMM22P1-201ENST00000418578 312 ntBASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 AC140479.3-201ENST00000418944 1126 ntBASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 AL158156.1-201ENST00000422509 473 ntBASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 BX276092.3-201ENST00000424182 230 ntBASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 RPL23AP50-201ENST00000434149 455 ntBASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 RPS17P8-201ENST00000434525 335 ntBASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 USP9YP7-201ENST00000436723 430 ntBASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 AC000111.2-201ENST00000448200 210 ntBASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 NDUFB1P2-201ENST00000449477 176 ntBASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 USP9YP32-201ENST00000452432 430 ntBASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 RPL9P32-201ENST00000464118 620 ntBASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 AC010285.1-201ENST00000470580 392 ntBASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 RPL17P19-201ENST00000489069 552 ntBASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 AC018437.1-201ENST00000492214 406 ntBASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 AC022447.4-201ENST00000504053 364 ntBASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 AC110794.1-201ENST00000505816 425 ntBASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 RNA5SP392-201ENST00000516905 112 ntBASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 AC090281.1-201ENST00000523019 276 ntBASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 TRAV32-201ENST00000553993 340 ntBASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 AL049839.1-201ENST00000556151 657 ntBASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 MED28P6-201ENST00000558776 231 ntBASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 MIR5699-201ENST00000578903 90 ntBASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 MIR3668-201ENST00000582138 75 ntBASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 AC123912.5-201ENST00000605470 343 ntBASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDC42EP3Q9UKI2 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 ZFRP1-201ENST00000457579 2970 ntBASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 Y_RNA.389-201ENST00000383924 113 ntBASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 HDGFP1-201ENST00000405943 252 ntBASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 AL356387.2-201ENST00000422272 243 ntBASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 EIF4HP2-201ENST00000424380 563 ntBASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 RPL7P2-201ENST00000427639 268 ntBASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 NUTF2P3-201ENST00000448540 384 ntBASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 AL691482.1-201ENST00000453255 87 ntBASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 RPL23AP31-201ENST00000456160 467 ntBASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 RN7SL810P-201ENST00000493031 276 ntBASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 MTND4LP22-201ENST00000508209 276 ntBASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 AC091868.1-201ENST00000508746 304 ntBASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 MRPL49P2-201ENST00000521066 465 ntBASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 ATP5F1P5-201ENST00000526403 760 ntBASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDC42EP3Q9UKI2 AC018529.3-201ENST00000624212 2254 ntBASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms