Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SALL4Q9UJQ4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SALL4Q9UJQ4 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SALL4Q9UJQ4 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SALL4Q9UJQ4 AC007685.1-201ENST00000329806 452 ntBASIC4.85□□□□□ -1.63
SALL4Q9UJQ4 MIR412-201ENST00000362142 91 ntBASIC4.85□□□□□ -1.63
SALL4Q9UJQ4 Y_RNA.20-201ENST00000362479 113 ntBASIC4.85□□□□□ -1.63
SALL4Q9UJQ4 Y_RNA.416-201ENST00000384014 113 ntBASIC4.85□□□□□ -1.63
SALL4Q9UJQ4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.85□□□□□ -1.63
SALL4Q9UJQ4 RAC1P3-201ENST00000416129 580 ntBASIC4.85□□□□□ -1.63
SALL4Q9UJQ4 AC140479.3-201ENST00000418944 1126 ntBASIC4.85□□□□□ -1.63
SALL4Q9UJQ4 AC096920.1-201ENST00000423991 241 ntBASIC4.85□□□□□ -1.63
SALL4Q9UJQ4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SALL4Q9UJQ4 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.85□□□□□ -1.63
SALL4Q9UJQ4 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.85□□□□□ -1.63
SALL4Q9UJQ4 AL049874.1-201ENST00000489560 388 ntBASIC4.85□□□□□ -1.63
SALL4Q9UJQ4 AC108145.1-201ENST00000503770 153 ntBASIC4.85□□□□□ -1.63
SALL4Q9UJQ4 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.85□□□□□ -1.63
SALL4Q9UJQ4 RAB9BP1-201ENST00000519581 626 ntBASIC4.85□□□□□ -1.63
SALL4Q9UJQ4 AP001880.2-201ENST00000538233 448 ntBASIC4.85□□□□□ -1.63
SALL4Q9UJQ4 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SALL4Q9UJQ4 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.85□□□□□ -1.63
SALL4Q9UJQ4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.85□□□□□ -1.63
SALL4Q9UJQ4 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.85□□□□□ -1.63
SALL4Q9UJQ4 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SALL4Q9UJQ4 MAPK10-303ENST00000641324 3959 ntBASIC4.85□□□□□ -1.63
SALL4Q9UJQ4 NCAPGP1-201ENST00000505112 1814 ntBASIC4.85□□□□□ -1.63
SALL4Q9UJQ4 Z75746.1-201ENST00000440243 2080 ntBASIC4.85□□□□□ -1.63
SALL4Q9UJQ4 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SALL4Q9UJQ4 OR51H2P-202ENST00000641424 3046 ntBASIC4.85□□□□□ -1.63
SALL4Q9UJQ4 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SALL4Q9UJQ4 AC092435.4-201ENST00000623012 4159 ntBASIC4.84□□□□□ -1.63
SALL4Q9UJQ4 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.84□□□□□ -1.63
SALL4Q9UJQ4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SALL4Q9UJQ4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SALL4Q9UJQ4 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SALL4Q9UJQ4 RNU1-32P-201ENST00000363937 159 ntBASIC4.84□□□□□ -1.63
SALL4Q9UJQ4 RNU1-63P-201ENST00000383902 164 ntBASIC4.84□□□□□ -1.63
SALL4Q9UJQ4 MIR298-201ENST00000401212 88 ntBASIC4.84□□□□□ -1.63
SALL4Q9UJQ4 SNORD56-201ENST00000413522 71 ntBASIC4.84□□□□□ -1.63
SALL4Q9UJQ4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.84□□□□□ -1.63
SALL4Q9UJQ4 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.84□□□□□ -1.63
SALL4Q9UJQ4 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.84□□□□□ -1.63
SALL4Q9UJQ4 AC004383.1-201ENST00000438135 289 ntBASIC4.84□□□□□ -1.63
SALL4Q9UJQ4 RPEP5-201ENST00000441137 268 ntBASIC4.84□□□□□ -1.63
SALL4Q9UJQ4 H2AFZP5-201ENST00000446960 382 ntBASIC4.84□□□□□ -1.63
SALL4Q9UJQ4 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.84□□□□□ -1.63
SALL4Q9UJQ4 SCARNA10-201ENST00000459255 330 ntBASIC4.84□□□□□ -1.63
SALL4Q9UJQ4 RN7SL41P-201ENST00000476144 297 ntBASIC4.84□□□□□ -1.63
SALL4Q9UJQ4 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.84□□□□□ -1.63
SALL4Q9UJQ4 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
SALL4Q9UJQ4 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.84□□□□□ -1.63
SALL4Q9UJQ4 AC137590.2-201ENST00000619709 240 ntBASIC4.84□□□□□ -1.63
SALL4Q9UJQ4 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.84□□□□□ -1.63
SALL4Q9UJQ4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SALL4Q9UJQ4 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
SALL4Q9UJQ4 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
SALL4Q9UJQ4 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SALL4Q9UJQ4 AL031595.2-201ENST00000624215 19071 ntBASIC4.84□□□□□ -1.64
SALL4Q9UJQ4 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.84□□□□□ -1.64
SALL4Q9UJQ4 AC022893.2-201ENST00000564832 3296 ntBASIC4.84□□□□□ -1.64
SALL4Q9UJQ4 LINC01109-201ENST00000603837 3081 ntBASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 RNU1-94P-201ENST00000362627 173 ntBASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 SNORD27-201ENST00000363981 72 ntBASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 RNU6-827P-201ENST00000365553 106 ntBASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 Y_RNA.785-201ENST00000384290 109 ntBASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 RNU2-25P-201ENST00000411041 191 ntBASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 PIGPP3-201ENST00000425307 415 ntBASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 AC087650.1-201ENST00000431445 468 ntBASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 RPL23AP65-201ENST00000475608 468 ntBASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 AC108022.1-201ENST00000493466 478 ntBASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 MLLT10P2-201ENST00000506434 249 ntBASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 Y_RNA.700-201ENST00000516806 100 ntBASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 AC134698.5-201ENST00000519444 336 ntBASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 AC073410.2-201ENST00000603240 332 ntBASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 AC008745.1-201ENST00000604064 271 ntBASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 AL161798.1-201ENST00000604630 131 ntBASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 AC091905.2-201ENST00000623143 306 ntBASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 AC243829.7-201ENST00000633081 225 ntBASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms