Protein–RNA interactions for Protein: Q9P0V3

SH3BP4, SH3 domain-binding protein 4, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4Q9P0V3 MTND2P23-201ENST00000422990 651 ntBASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 MTND4P19-201ENST00000446659 478 ntBASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 AC234775.1-201ENST00000454247 670 ntBASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 SCARNA18-201ENST00000459004 134 ntBASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 AC004801.2-202ENST00000463559 283 ntBASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 RPS23P7-201ENST00000466210 444 ntBASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 AC084198.1-201ENST00000477747 402 ntBASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 AC068587.1-201ENST00000483613 781 ntBASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 AC026801.2-201ENST00000515352 425 ntBASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 RN7SKP122-201ENST00000515923 296 ntBASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 RNU6-559P-201ENST00000516151 98 ntBASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 Y_RNA.682-201ENST00000516457 100 ntBASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 IGKV2-23-201ENST00000518729 323 ntBASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 ELOCP31-201ENST00000540463 467 ntBASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 AL163153.1-201ENST00000554223 283 ntBASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 AL121821.2-201ENST00000556081 394 ntBASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 RPL23AP84-201ENST00000571193 464 ntBASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 MIR3672-201ENST00000584290 82 ntBASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 AP001836.1-201ENST00000604675 523 ntBASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 AC245389.1-201ENST00000605141 529 ntBASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 DUSP12P1-201ENST00000612874 516 ntBASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 AC103705.1-201ENST00000619013 241 ntBASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 MTND4LP32-201ENST00000636111 270 ntBASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 MIR4275-201ENST00000636486 87 ntBASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SH3BP4Q9P0V3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 PRO1804-201ENST00000623780 2050 ntBASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 RNU6-254P-201ENST00000363377 107 ntBASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 MIR548F5-201ENST00000408421 86 ntBASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 RNA5SP317-201ENST00000410176 116 ntBASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 RNU2-43P-201ENST00000410306 190 ntBASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 RN7SKP158-201ENST00000410453 326 ntBASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 RNA5SP311-201ENST00000411290 116 ntBASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 BTF3L4P3-201ENST00000418879 476 ntBASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 SNORA71B-202ENST00000439232 272 ntBASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 RPL21P8-201ENST00000465083 535 ntBASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 HMGB3P15-201ENST00000507326 574 ntBASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 RNA5SP208-201ENST00000516156 78 ntBASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 RNA5SP315-201ENST00000516340 116 ntBASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 RN7SKP209-201ENST00000516888 304 ntBASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 RNA5SP312-201ENST00000517068 116 ntBASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 SNORA31.22-201ENST00000517204 135 ntBASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 MIR5047-201ENST00000579212 100 ntBASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 AC067852.3-201ENST00000589177 561 ntBASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 AL606490.9-201ENST00000603331 271 ntBASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 AC092747.3-201ENST00000603769 301 ntBASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 SNRPGP17-201ENST00000603780 214 ntBASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 AC124303.1-201ENST00000605703 360 ntBASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 AC007619.2-201ENST00000605743 379 ntBASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 MIR6798-201ENST00000612887 67 ntBASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 AC012409.4-201ENST00000612923 249 ntBASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 AL589994.2-201ENST00000621124 579 ntBASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.61□□□□□ -1.83
SH3BP4Q9P0V3 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SH3BP4Q9P0V3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SH3BP4Q9P0V3 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SH3BP4Q9P0V3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SH3BP4Q9P0V3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SH3BP4Q9P0V3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms