Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 MTND1P1-201ENST00000445453 368 ntBASIC2.8□□□□□ -1.96
NDE1Q9NXR1 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
NDE1Q9NXR1 RN7SL863P-201ENST00000462370 296 ntBASIC2.8□□□□□ -1.96
NDE1Q9NXR1 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.8□□□□□ -1.96
NDE1Q9NXR1 AC090525.1-201ENST00000479116 478 ntBASIC2.8□□□□□ -1.96
NDE1Q9NXR1 AL049874.1-201ENST00000489560 388 ntBASIC2.8□□□□□ -1.96
NDE1Q9NXR1 SCARNA13-201ENST00000516672 275 ntBASIC2.8□□□□□ -1.96
NDE1Q9NXR1 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.8□□□□□ -1.96
NDE1Q9NXR1 FAM92A1P1-201ENST00000528023 890 ntBASIC2.8□□□□□ -1.96
NDE1Q9NXR1 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
NDE1Q9NXR1 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.8□□□□□ -1.96
NDE1Q9NXR1 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.8□□□□□ -1.96
NDE1Q9NXR1 DPPA3P3-201ENST00000603842 430 ntBASIC2.8□□□□□ -1.96
NDE1Q9NXR1 Z84480.1-201ENST00000605131 311 ntBASIC2.8□□□□□ -1.96
NDE1Q9NXR1 AL157786.1-207ENST00000627771 695 ntBASIC2.8□□□□□ -1.96
NDE1Q9NXR1 MIR6863-201ENST00000636112 90 ntBASIC2.8□□□□□ -1.96
NDE1Q9NXR1 AC068137.3-201ENST00000639191 341 ntBASIC2.8□□□□□ -1.96
NDE1Q9NXR1 AC073869.6-201ENST00000640656 341 ntBASIC2.8□□□□□ -1.96
NDE1Q9NXR1 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
NDE1Q9NXR1 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
NDE1Q9NXR1 AL049781.1-201ENST00000623195 3585 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.79□□□□□ -1.96
NDE1Q9NXR1 AC005832.2-201ENST00000538921 1430 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
NDE1Q9NXR1 MIR22-201ENST00000362190 85 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 RNU5A-1-201ENST00000362698 116 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 RNU6-188P-201ENST00000364207 107 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 Y_RNA.381-201ENST00000365666 102 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 Y_RNA.409-201ENST00000383990 98 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 SNORA36C-201ENST00000384289 132 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 RNU6-456P-201ENST00000384493 107 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 RNU6-780P-201ENST00000391030 104 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.79□□□□□ -1.96
NDE1Q9NXR1 RNU4-55P-201ENST00000410731 137 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 RNU4-47P-201ENST00000410876 114 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 AC008850.1-201ENST00000427546 362 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.79□□□□□ -1.96
NDE1Q9NXR1 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.79□□□□□ -1.96
NDE1Q9NXR1 RPS15AP9-201ENST00000439856 381 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 AC093156.1-201ENST00000440382 670 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.79□□□□□ -1.96
NDE1Q9NXR1 AL136380.1-201ENST00000447970 162 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.79□□□□□ -1.96
NDE1Q9NXR1 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.79□□□□□ -1.96
NDE1Q9NXR1 AC008155.2-201ENST00000464337 397 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 MTCO2P29-201ENST00000465212 189 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.79□□□□□ -1.96
NDE1Q9NXR1 AC103975.1-201ENST00000482506 483 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.79□□□□□ -1.96
NDE1Q9NXR1 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.79□□□□□ -1.96
NDE1Q9NXR1 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
NDE1Q9NXR1 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.79□□□□□ -1.96
NDE1Q9NXR1 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.79□□□□□ -1.96
NDE1Q9NXR1 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.79□□□□□ -1.96
NDE1Q9NXR1 SNORA31.1-201ENST00000515993 133 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 SNORA31.5-201ENST00000516190 133 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 RNU6-506P-201ENST00000516553 94 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 RNU6-314P-201ENST00000516574 104 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 RN7SKP272-201ENST00000516988 232 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 AC090572.1-201ENST00000519251 160 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.79□□□□□ -1.96
NDE1Q9NXR1 HMGB1P41-201ENST00000520234 440 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.79□□□□□ -1.96
NDE1Q9NXR1 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.79□□□□□ -1.96
NDE1Q9NXR1 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.79□□□□□ -1.96
NDE1Q9NXR1 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.79□□□□□ -1.96
NDE1Q9NXR1 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.79□□□□□ -1.96
NDE1Q9NXR1 AC011611.1-201ENST00000552179 197 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 SUB1P2-201ENST00000556401 297 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
NDE1Q9NXR1 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.79□□□□□ -1.96
NDE1Q9NXR1 GLUD1P4-201ENST00000590914 418 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 AC106900.2-201ENST00000604994 317 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 RPL23AP88-201ENST00000605759 454 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 AC007684.1-201ENST00000609671 477 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
NDE1Q9NXR1 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
NDE1Q9NXR1 AL121772.2-201ENST00000614331 297 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 AC006111.3-201ENST00000622137 383 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 AC012442.3-202ENST00000636742 206 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
NDE1Q9NXR1 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
NDE1Q9NXR1 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
NDE1Q9NXR1 OR4G2P-202ENST00000641004 1759 ntBASIC2.79□□□□□ -1.96
NDE1Q9NXR1 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.79□□□□□ -1.96
NDE1Q9NXR1 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.78□□□□□ -1.96
NDE1Q9NXR1 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
NDE1Q9NXR1 AL355596.1-201ENST00000565399 3996 ntBASIC2.78□□□□□ -1.96
NDE1Q9NXR1 AC080100.1-201ENST00000624239 5356 ntBASIC2.78□□□□□ -1.96
NDE1Q9NXR1 RNY1P12-201ENST00000364251 105 ntBASIC2.78□□□□□ -1.96
NDE1Q9NXR1 Y_RNA.372-201ENST00000365599 102 ntBASIC2.78□□□□□ -1.96
NDE1Q9NXR1 SNORD21-201ENST00000383953 95 ntBASIC2.78□□□□□ -1.96
NDE1Q9NXR1 RNU1-109P-201ENST00000383960 147 ntBASIC2.78□□□□□ -1.96
NDE1Q9NXR1 AC068050.1-201ENST00000394891 380 ntBASIC2.78□□□□□ -1.96
NDE1Q9NXR1 AL512633.1-201ENST00000399931 655 ntBASIC2.78□□□□□ -1.96
NDE1Q9NXR1 AL359634.1-202ENST00000404721 284 ntBASIC2.78□□□□□ -1.96
NDE1Q9NXR1 TXNP7-201ENST00000406296 293 ntBASIC2.78□□□□□ -1.96
NDE1Q9NXR1 SNORA11.2-201ENST00000408318 127 ntBASIC2.78□□□□□ -1.96
NDE1Q9NXR1 MIR548F1-201ENST00000408667 84 ntBASIC2.78□□□□□ -1.96
NDE1Q9NXR1 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms