Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
CDT1Q9H211 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.47□□□□□ -1.85
CDT1Q9H211 FTH1P25-201ENST00000447665 469 ntBASIC3.47□□□□□ -1.85
CDT1Q9H211 AC140076.1-201ENST00000449897 361 ntBASIC3.47□□□□□ -1.85
CDT1Q9H211 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.47□□□□□ -1.85
CDT1Q9H211 ELOCP23-201ENST00000452014 332 ntBASIC3.47□□□□□ -1.85
CDT1Q9H211 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.47□□□□□ -1.85
CDT1Q9H211 AC010401.1-201ENST00000463867 348 ntBASIC3.47□□□□□ -1.85
CDT1Q9H211 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.47□□□□□ -1.85
CDT1Q9H211 RNU2-10P-201ENST00000516375 211 ntBASIC3.47□□□□□ -1.85
CDT1Q9H211 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.47□□□□□ -1.85
CDT1Q9H211 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.47□□□□□ -1.85
CDT1Q9H211 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.47□□□□□ -1.85
CDT1Q9H211 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.47□□□□□ -1.85
CDT1Q9H211 AC098848.2-201ENST00000588023 330 ntBASIC3.47□□□□□ -1.85
CDT1Q9H211 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.47□□□□□ -1.85
CDT1Q9H211 AP001330.4-201ENST00000604350 154 ntBASIC3.47□□□□□ -1.85
CDT1Q9H211 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.47□□□□□ -1.85
CDT1Q9H211 AC063943.3-201ENST00000615562 356 ntBASIC3.47□□□□□ -1.85
CDT1Q9H211 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
CDT1Q9H211 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.47□□□□□ -1.85
CDT1Q9H211 AC018692.3-201ENST00000623929 123 ntBASIC3.47□□□□□ -1.85
CDT1Q9H211 AC009033.1-201ENST00000624279 431 ntBASIC3.47□□□□□ -1.85
CDT1Q9H211 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CDT1Q9H211 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.47□□□□□ -1.85
CDT1Q9H211 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.47□□□□□ -1.85
CDT1Q9H211 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.47□□□□□ -1.85
CDT1Q9H211 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CDT1Q9H211 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.47□□□□□ -1.85
CDT1Q9H211 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.47□□□□□ -1.85
CDT1Q9H211 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.85
CDT1Q9H211 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.46□□□□□ -1.85
CDT1Q9H211 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDT1Q9H211 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDT1Q9H211 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDT1Q9H211 CBX3P1-201ENST00000325243 554 ntBASIC3.46□□□□□ -1.86
CDT1Q9H211 RNU6-50P-201ENST00000362356 103 ntBASIC3.46□□□□□ -1.86
CDT1Q9H211 RNU6-451P-201ENST00000362921 107 ntBASIC3.46□□□□□ -1.86
CDT1Q9H211 RNU6-173P-201ENST00000364215 104 ntBASIC3.46□□□□□ -1.86
CDT1Q9H211 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CDT1Q9H211 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
CDT1Q9H211 RNU6-877P-201ENST00000383868 107 ntBASIC3.46□□□□□ -1.86
CDT1Q9H211 SNORA7.4-201ENST00000384249 137 ntBASIC3.46□□□□□ -1.86
CDT1Q9H211 Y_RNA.573-201ENST00000384763 105 ntBASIC3.46□□□□□ -1.86
CDT1Q9H211 MIR1-2-201ENST00000384961 85 ntBASIC3.46□□□□□ -1.86
CDT1Q9H211 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CDT1Q9H211 RNU2-9P-201ENST00000410194 145 ntBASIC3.46□□□□□ -1.86
CDT1Q9H211 MTATP6P18-201ENST00000417994 673 ntBASIC3.46□□□□□ -1.86
CDT1Q9H211 MTND4P28-201ENST00000426217 387 ntBASIC3.46□□□□□ -1.86
CDT1Q9H211 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.46□□□□□ -1.86
CDT1Q9H211 SETP5-201ENST00000437270 562 ntBASIC3.46□□□□□ -1.86
CDT1Q9H211 GAPDHP27-201ENST00000447427 1020 ntBASIC3.46□□□□□ -1.86
CDT1Q9H211 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.46□□□□□ -1.86
CDT1Q9H211 GMPSP1-201ENST00000514075 579 ntBASIC3.46□□□□□ -1.86
CDT1Q9H211 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.46□□□□□ -1.86
CDT1Q9H211 SCARNA20.6-201ENST00000517251 106 ntBASIC3.46□□□□□ -1.86
CDT1Q9H211 HMGB1P41-201ENST00000520234 440 ntBASIC3.46□□□□□ -1.86
CDT1Q9H211 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CDT1Q9H211 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.46□□□□□ -1.86
CDT1Q9H211 AP003072.2-201ENST00000527756 676 ntBASIC3.46□□□□□ -1.86
CDT1Q9H211 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CDT1Q9H211 AP003034.1-201ENST00000534621 422 ntBASIC3.46□□□□□ -1.86
CDT1Q9H211 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.46□□□□□ -1.86
CDT1Q9H211 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.46□□□□□ -1.86
CDT1Q9H211 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.46□□□□□ -1.86
CDT1Q9H211 OR4H12P-201ENST00000556269 907 ntBASIC3.46□□□□□ -1.86
CDT1Q9H211 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.46□□□□□ -1.86
CDT1Q9H211 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.46□□□□□ -1.86
CDT1Q9H211 AC105224.1-201ENST00000587055 421 ntBASIC3.46□□□□□ -1.86
CDT1Q9H211 AC007621.1-201ENST00000604544 437 ntBASIC3.46□□□□□ -1.86
CDT1Q9H211 RMST_8.1-201ENST00000610287 165 ntBASIC3.46□□□□□ -1.86
CDT1Q9H211 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.46□□□□□ -1.86
CDT1Q9H211 SNHG22-203ENST00000617833 660 ntBASIC3.46□□□□□ -1.86
CDT1Q9H211 AC009161.2-201ENST00000624626 138 ntBASIC3.46□□□□□ -1.86
CDT1Q9H211 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.46□□□□□ -1.86
CDT1Q9H211 MTND4P29-201ENST00000503122 1372 ntBASIC3.46□□□□□ -1.86
CDT1Q9H211 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CDT1Q9H211 AF117829.1-206ENST00000621883 3802 ntBASIC3.46□□□□□ -1.86
CDT1Q9H211 AC091152.2-201ENST00000591628 2569 ntBASIC3.46□□□□□ -1.86
CDT1Q9H211 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDT1Q9H211 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.45□□□□□ -1.86
CDT1Q9H211 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CDT1Q9H211 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDT1Q9H211 RNU6-108P-201ENST00000365558 107 ntBASIC3.45□□□□□ -1.86
CDT1Q9H211 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CDT1Q9H211 AC110754.1-201ENST00000399740 601 ntBASIC3.45□□□□□ -1.86
CDT1Q9H211 TXNP7-201ENST00000406296 293 ntBASIC3.45□□□□□ -1.86
CDT1Q9H211 RNU6-1068P-201ENST00000410958 103 ntBASIC3.45□□□□□ -1.86
CDT1Q9H211 RNA5SP31-201ENST00000411144 127 ntBASIC3.45□□□□□ -1.86
CDT1Q9H211 RPL21P111-201ENST00000418453 477 ntBASIC3.45□□□□□ -1.86
CDT1Q9H211 HMGB3P12-201ENST00000438745 556 ntBASIC3.45□□□□□ -1.86
CDT1Q9H211 CYCSP32-201ENST00000440548 321 ntBASIC3.45□□□□□ -1.86
CDT1Q9H211 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.45□□□□□ -1.86
CDT1Q9H211 RPL23AP31-201ENST00000456160 467 ntBASIC3.45□□□□□ -1.86
CDT1Q9H211 PMCHL2-203ENST00000457791 237 ntBASIC3.45□□□□□ -1.86
CDT1Q9H211 RNU7-170P-201ENST00000459303 61 ntBASIC3.45□□□□□ -1.86
CDT1Q9H211 AP000852.1-201ENST00000472460 573 ntBASIC3.45□□□□□ -1.86
CDT1Q9H211 AC108860.1-201ENST00000484521 383 ntBASIC3.45□□□□□ -1.86
CDT1Q9H211 RPL36AP51-201ENST00000487216 318 ntBASIC3.45□□□□□ -1.86
CDT1Q9H211 RPL39P36-201ENST00000490784 156 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms