Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
KRTAP3-1Q9BYR8 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
KRTAP3-1Q9BYR8 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
KRTAP3-1Q9BYR8 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC2.95□□□□□ -1.94
KRTAP3-1Q9BYR8 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC2.95□□□□□ -1.94
KRTAP3-1Q9BYR8 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC2.95□□□□□ -1.94
KRTAP3-1Q9BYR8 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
KRTAP3-1Q9BYR8 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
KRTAP3-1Q9BYR8 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.95□□□□□ -1.94
KRTAP3-1Q9BYR8 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
KRTAP3-1Q9BYR8 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC2.95□□□□□ -1.94
KRTAP3-1Q9BYR8 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC2.95□□□□□ -1.94
KRTAP3-1Q9BYR8 C4BPAP1-201ENST00000415474 1893 ntBASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 SNORD45.3-201ENST00000363836 72 ntBASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 RNA5SP223-201ENST00000365174 120 ntBASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 U1.1-201ENST00000384101 164 ntBASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 RNU6-880P-201ENST00000384526 107 ntBASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 SNORA48.5-201ENST00000391143 135 ntBASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 GPS2P1-201ENST00000411761 986 ntBASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 CYCSP48-201ENST00000417124 323 ntBASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 RNF10P1-201ENST00000418589 369 ntBASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 RPL7AP49-201ENST00000429522 581 ntBASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 AL591438.1-201ENST00000433508 581 ntBASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 HSPE1P21-201ENST00000438283 308 ntBASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 AC099670.1-201ENST00000455141 783 ntBASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 ENSA-211ENST00000503345 793 ntTSL 3 BASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 RNU1-117P-201ENST00000517041 158 ntBASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 MIR378D2-201ENST00000580636 98 ntBASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 MIR212-201ENST00000586026 110 ntBASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 AL034555.1-201ENST00000604816 211 ntBASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 IGLCOR22-2-201ENST00000605398 313 ntBASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 AC025754.2-201ENST00000606491 432 ntBASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 TCL6_2.1-201ENST00000615162 119 ntBASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 MIR6829-201ENST00000620375 67 ntBASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 AL121890.5-201ENST00000620848 304 ntBASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 GDA-209ENST00000545168 5362 ntTSL 2 BASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
KRTAP3-1Q9BYR8 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 MAPK10-328ENST00000641553 4009 ntBASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 SELENOWP1-201ENST00000322792 252 ntBASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 Y_RNA.35-201ENST00000362601 101 ntBASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 RNU1-134P-201ENST00000362935 165 ntBASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 RNA5SP326-201ENST00000363209 110 ntBASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 Y_RNA.120-201ENST00000363304 110 ntBASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 RN7SKP280-201ENST00000364196 304 ntBASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 Y_RNA.280-201ENST00000364765 112 ntBASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 RNA5SP455-201ENST00000365190 119 ntBASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 Y_RNA.361-201ENST00000365515 120 ntBASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 SNORD94-201ENST00000386037 137 ntBASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 EIF4A1P3-201ENST00000411521 244 ntBASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 AL139281.1-201ENST00000422120 335 ntBASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 EIF4HP2-201ENST00000424380 563 ntBASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 NDUFB4P8-201ENST00000435351 367 ntBASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 AC023141.3-201ENST00000436698 278 ntBASIC2.93□□□□□ -1.94
KRTAP3-1Q9BYR8 AC023141.8-201ENST00000442554 208 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms