Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 RNU4-46P-201ENST00000410818 138 ntBASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 AC114491.1-201ENST00000416095 246 ntBASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 USP9YP27-201ENST00000418455 438 ntBASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 AL353193.1-201ENST00000421444 268 ntBASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 COTL1P1-201ENST00000422309 375 ntBASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 MTCYBP5-201ENST00000423752 1135 ntBASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 UBE2D3P2-201ENST00000424409 445 ntBASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 AC006989.1-201ENST00000427212 131 ntBASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 AL353705.1-201ENST00000433468 480 ntBASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 HMGB3P11-201ENST00000440127 604 ntBASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 AC078785.3-201ENST00000476607 425 ntBASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 AC011352.1-201ENST00000512300 793 ntBASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 TTC39CP1-201ENST00000512513 755 ntBASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 RNU6-1281P-201ENST00000516223 105 ntBASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 RNU6-1178P-201ENST00000516674 107 ntBASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 AC006504.3-201ENST00000586818 523 ntBASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 AC008945.2-201ENST00000606056 604 ntBASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 AC103710.3-201ENST00000608157 948 ntBASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 AC027309.3-201ENST00000623419 351 ntBASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 MTND4P14-201ENST00000435799 1354 ntBASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 AC068647.1-201ENST00000489539 2265 ntBASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 MIR422A-201ENST00000362286 90 ntBASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 SNORA44-201ENST00000384584 132 ntBASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 RNU1-89P-201ENST00000384592 164 ntBASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 RNU6-328P-201ENST00000390887 106 ntBASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 BTF3P7-201ENST00000407097 488 ntBASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 AL596276.1-201ENST00000434465 418 ntBASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 AL590664.1-201ENST00000448065 339 ntBASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 AC003071.1-201ENST00000451219 789 ntBASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 RNU7-170P-201ENST00000459303 61 ntBASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 AL163973.1-201ENST00000484753 577 ntBASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 MTAPP1-201ENST00000489154 819 ntBASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 AC011602.1-201ENST00000546484 331 ntBASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 SNORA59B-202ENST00000578183 701 ntBASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 AC098826.3-201ENST00000603823 466 ntBASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 AL138889.2-201ENST00000603883 242 ntBASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 AC022893.3-201ENST00000607665 437 ntBASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 U7.8-201ENST00000619968 63 ntBASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.09□□□□□ -1.75
RTFDC1Q9BY42 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.76
RTFDC1Q9BY42 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
RTFDC1Q9BY42 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
RTFDC1Q9BY42 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
RTFDC1Q9BY42 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RTFDC1Q9BY42 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
RTFDC1Q9BY42 RPL7P26-201ENST00000333817 754 ntBASIC4.08□□□□□ -1.76
RTFDC1Q9BY42 RNU6-288P-201ENST00000363690 104 ntBASIC4.08□□□□□ -1.76
RTFDC1Q9BY42 Y_RNA.255-201ENST00000364581 97 ntBASIC4.08□□□□□ -1.76
RTFDC1Q9BY42 SNORD115-7-201ENST00000365306 82 ntBASIC4.08□□□□□ -1.76
RTFDC1Q9BY42 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RTFDC1Q9BY42 RNU6-1158P-201ENST00000391167 107 ntBASIC4.08□□□□□ -1.76
RTFDC1Q9BY42 MIR548F1-201ENST00000408667 84 ntBASIC4.08□□□□□ -1.76
RTFDC1Q9BY42 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.08□□□□□ -1.76
RTFDC1Q9BY42 ZNF863P-201ENST00000426746 417 ntBASIC4.08□□□□□ -1.76
RTFDC1Q9BY42 GPM6BP2-201ENST00000432046 144 ntBASIC4.08□□□□□ -1.76
RTFDC1Q9BY42 AL591704.1-201ENST00000432574 275 ntBASIC4.08□□□□□ -1.76
RTFDC1Q9BY42 AC000111.3-201ENST00000433478 193 ntBASIC4.08□□□□□ -1.76
RTFDC1Q9BY42 AL606489.2-201ENST00000433886 234 ntBASIC4.08□□□□□ -1.76
RTFDC1Q9BY42 RPS15AP9-201ENST00000439856 381 ntBASIC4.08□□□□□ -1.76
RTFDC1Q9BY42 AC016691.1-201ENST00000441321 413 ntBASIC4.08□□□□□ -1.76
RTFDC1Q9BY42 CALM1P1-201ENST00000442082 433 ntBASIC4.08□□□□□ -1.76
RTFDC1Q9BY42 GPM6BP1-201ENST00000446387 144 ntBASIC4.08□□□□□ -1.76
RTFDC1Q9BY42 FDX1P2-201ENST00000450769 375 ntBASIC4.08□□□□□ -1.76
RTFDC1Q9BY42 AL136097.1-201ENST00000456945 913 ntBASIC4.08□□□□□ -1.76
RTFDC1Q9BY42 RPS29P15-201ENST00000458329 171 ntBASIC4.08□□□□□ -1.76
RTFDC1Q9BY42 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.08□□□□□ -1.76
RTFDC1Q9BY42 KC877373.1-201ENST00000479066 408 ntBASIC4.08□□□□□ -1.76
RTFDC1Q9BY42 RPL30P14-201ENST00000482744 348 ntBASIC4.08□□□□□ -1.76
RTFDC1Q9BY42 RPL7P47-201ENST00000497299 556 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms