Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 MAPK10-372ENST00000641954 3413 ntBASIC5.04□□□□□ -1.6
TRAIPQ9BWF2 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRAIPQ9BWF2 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TRAIPQ9BWF2 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 AC139713.2-215ENST00000641428 5037 ntBASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 Y_RNA.2-201ENST00000362330 96 ntBASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 RNU1-83P-201ENST00000363426 164 ntBASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 RNU6-43P-201ENST00000384302 107 ntBASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 MIR195-201ENST00000385194 87 ntBASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 RNU6-1245P-201ENST00000411130 106 ntBASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 AL356387.2-201ENST00000422272 243 ntBASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 RPL23AP50-201ENST00000434149 455 ntBASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 AC010099.1-201ENST00000455434 375 ntBASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 RPL23AP62-201ENST00000463396 453 ntBASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 MTCYBP40-201ENST00000509390 1135 ntBASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 AC015795.1-201ENST00000513669 327 ntBASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 SNORA31.1-201ENST00000515993 133 ntBASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 SNORA31.5-201ENST00000516190 133 ntBASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 RNU6-1153P-201ENST00000516760 105 ntBASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 TRAV32-201ENST00000553993 340 ntBASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 AC093249.1-201ENST00000567049 203 ntBASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 AC005899.2-201ENST00000584353 90 ntBASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 AL021997.2-201ENST00000615674 271 ntBASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 MIR6134-201ENST00000617606 109 ntBASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRAIPQ9BWF2 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 RNU6-858P-201ENST00000362436 107 ntBASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 AL513475.1-201ENST00000406602 315 ntBASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 Y_RNA.594-201ENST00000410373 140 ntBASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 RAB9AP3-201ENST00000412737 573 ntBASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 AL591043.1-201ENST00000432461 424 ntBASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 AC004938.1-201ENST00000438468 308 ntBASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 AC098831.1-201ENST00000440661 216 ntBASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 RAB9AP1-201ENST00000449393 573 ntBASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 SNORD5.1-201ENST00000458800 75 ntBASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 AC133134.1-201ENST00000466800 359 ntBASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 AL163153.1-201ENST00000554223 283 ntBASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 AC103996.1-201ENST00000555468 102 ntBASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 PARP1P2-201ENST00000556806 195 ntBASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 AP000654.2-201ENST00000605633 586 ntBASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 USP12-203ENST00000620323 349 ntTSL 3 BASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 U4.7-201ENST00000638126 106 ntBASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.02□□□□□ -1.61
TRAIPQ9BWF2 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 RNU6-78P-201ENST00000362897 107 ntBASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 Z98749.2-208ENST00000381646 500 ntBASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 RNU6-1077P-201ENST00000410506 102 ntBASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 BPY2DP-201ENST00000422208 265 ntBASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 RSL24D1P6-201ENST00000426934 401 ntBASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 USP9YP30-201ENST00000430729 455 ntBASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 NUTF2P7-201ENST00000453086 375 ntBASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 FGF7P3-201ENST00000454645 303 ntBASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 RPL7AP28-201ENST00000464513 571 ntBASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 AC026782.1-201ENST00000512952 449 ntBASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 AC093303.1-201ENST00000514549 295 ntBASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 OR8R1P-201ENST00000543943 764 ntBASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 MIR4273-201ENST00000582824 84 ntBASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 HMGN2P15-201ENST00000585707 270 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms