Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC023824.2-201ENST00000566185 400 ntBASIC1.48□□□□□ -2.17
IFT140Q96RY7 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.48□□□□□ -2.17
IFT140Q96RY7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
IFT140Q96RY7 CCT4P2-201ENST00000233836 1548 ntBASIC1.47□□□□□ -2.17
IFT140Q96RY7 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
IFT140Q96RY7 AC091812.1-201ENST00000432235 1948 ntBASIC1.47□□□□□ -2.17
IFT140Q96RY7 RNU1-105P-201ENST00000363470 161 ntBASIC1.47□□□□□ -2.17
IFT140Q96RY7 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.47□□□□□ -2.17
IFT140Q96RY7 AC006548.1-201ENST00000427470 102 ntBASIC1.47□□□□□ -2.17
IFT140Q96RY7 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.47□□□□□ -2.17
IFT140Q96RY7 RNF138P1-201ENST00000502765 546 ntBASIC1.47□□□□□ -2.17
IFT140Q96RY7 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.47□□□□□ -2.17
IFT140Q96RY7 EIF4EP5-201ENST00000528228 640 ntBASIC1.47□□□□□ -2.17
IFT140Q96RY7 AL160236.1-201ENST00000556317 195 ntBASIC1.47□□□□□ -2.17
IFT140Q96RY7 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.47□□□□□ -2.17
IFT140Q96RY7 SNORD14A-201ENST00000606526 91 ntBASIC1.47□□□□□ -2.17
IFT140Q96RY7 AC106052.1-201ENST00000608029 497 ntBASIC1.47□□□□□ -2.17
IFT140Q96RY7 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
IFT140Q96RY7 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.47□□□□□ -2.17
IFT140Q96RY7 CR381572.1-201ENST00000625098 102 ntBASIC1.47□□□□□ -2.17
IFT140Q96RY7 AL589743.1-201ENST00000551932 2712 ntBASIC1.47□□□□□ -2.17
IFT140Q96RY7 MTND5P9-201ENST00000503854 1755 ntBASIC1.47□□□□□ -2.17
IFT140Q96RY7 RNU6-198P-201ENST00000384258 104 ntBASIC1.46□□□□□ -2.18
IFT140Q96RY7 U3.20-201ENST00000390909 217 ntBASIC1.46□□□□□ -2.18
IFT140Q96RY7 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.46□□□□□ -2.18
IFT140Q96RY7 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC1.46□□□□□ -2.18
IFT140Q96RY7 MTCO3P46-201ENST00000425787 232 ntBASIC1.46□□□□□ -2.18
IFT140Q96RY7 RPL7L1P10-201ENST00000427790 463 ntBASIC1.46□□□□□ -2.18
IFT140Q96RY7 OSTCP8-201ENST00000445117 448 ntBASIC1.46□□□□□ -2.18
IFT140Q96RY7 AL034418.1-201ENST00000448675 860 ntBASIC1.46□□□□□ -2.18
IFT140Q96RY7 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.46□□□□□ -2.18
IFT140Q96RY7 PNPLA4P1-201ENST00000458328 305 ntBASIC1.46□□□□□ -2.18
IFT140Q96RY7 AC026801.1-201ENST00000497178 464 ntBASIC1.46□□□□□ -2.18
IFT140Q96RY7 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
IFT140Q96RY7 NDUFB4P2-201ENST00000509515 391 ntBASIC1.46□□□□□ -2.18
IFT140Q96RY7 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.46□□□□□ -2.18
IFT140Q96RY7 AC078899.2-201ENST00000595282 212 ntBASIC1.46□□□□□ -2.18
IFT140Q96RY7 AL355812.1-201ENST00000603215 216 ntBASIC1.46□□□□□ -2.18
IFT140Q96RY7 AL050343.2-201ENST00000607338 280 ntBASIC1.46□□□□□ -2.18
IFT140Q96RY7 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.46□□□□□ -2.18
IFT140Q96RY7 AC022513.1-201ENST00000624512 117 ntBASIC1.46□□□□□ -2.18
IFT140Q96RY7 CR848007.1-201ENST00000442354 1699 ntBASIC1.46□□□□□ -2.18
IFT140Q96RY7 AC087359.1-201ENST00000508335 1740 ntBASIC1.46□□□□□ -2.18
IFT140Q96RY7 SNORA68.1-201ENST00000364537 132 ntBASIC1.45□□□□□ -2.18
IFT140Q96RY7 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.45□□□□□ -2.18
IFT140Q96RY7 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.45□□□□□ -2.18
IFT140Q96RY7 FCF1P2-201ENST00000415284 583 ntBASIC1.45□□□□□ -2.18
IFT140Q96RY7 OR6K5P-201ENST00000447050 945 ntBASIC1.45□□□□□ -2.18
IFT140Q96RY7 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
IFT140Q96RY7 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.45□□□□□ -2.18
IFT140Q96RY7 SNORD97-201ENST00000459187 142 ntBASIC1.45□□□□□ -2.18
IFT140Q96RY7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.45□□□□□ -2.18
IFT140Q96RY7 LY96-202ENST00000518893 430 ntTSL 3 BASIC1.45□□□□□ -2.18
IFT140Q96RY7 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.45□□□□□ -2.18
IFT140Q96RY7 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.45□□□□□ -2.18
IFT140Q96RY7 AC090888.1-201ENST00000561335 1141 ntBASIC1.45□□□□□ -2.18
IFT140Q96RY7 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.45□□□□□ -2.18
IFT140Q96RY7 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.45□□□□□ -2.18
IFT140Q96RY7 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.45□□□□□ -2.18
IFT140Q96RY7 RNU6-1074P-201ENST00000383995 104 ntBASIC1.44□□□□□ -2.18
IFT140Q96RY7 U3.29-201ENST00000391296 212 ntBASIC1.44□□□□□ -2.18
IFT140Q96RY7 AC092745.2-202ENST00000411880 369 ntBASIC1.44□□□□□ -2.18
IFT140Q96RY7 TATDN1P1-201ENST00000414123 891 ntBASIC1.44□□□□□ -2.18
IFT140Q96RY7 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.44□□□□□ -2.18
IFT140Q96RY7 AL365496.1-201ENST00000426885 215 ntBASIC1.44□□□□□ -2.18
IFT140Q96RY7 JTBP1-201ENST00000441314 247 ntBASIC1.44□□□□□ -2.18
IFT140Q96RY7 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.44□□□□□ -2.18
IFT140Q96RY7 TRGVB-201ENST00000453257 471 ntBASIC1.44□□□□□ -2.18
IFT140Q96RY7 BX248409.1-201ENST00000455497 255 ntBASIC1.44□□□□□ -2.18
IFT140Q96RY7 ANKRD26P4-201ENST00000455755 950 ntBASIC1.44□□□□□ -2.18
IFT140Q96RY7 COL6A4P2-205ENST00000509855 506 ntBASIC1.44□□□□□ -2.18
IFT140Q96RY7 AP004247.1-201ENST00000531556 1289 ntBASIC1.44□□□□□ -2.18
IFT140Q96RY7 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.44□□□□□ -2.18
IFT140Q96RY7 AC003001.2-201ENST00000616294 831 ntBASIC1.44□□□□□ -2.18
IFT140Q96RY7 AL590410.1-201ENST00000617925 333 ntBASIC1.44□□□□□ -2.18
IFT140Q96RY7 AC109454.4-201ENST00000623411 649 ntBASIC1.44□□□□□ -2.18
IFT140Q96RY7 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.44□□□□□ -2.18
IFT140Q96RY7 RNU6-492P-201ENST00000363035 104 ntBASIC1.43□□□□□ -2.18
IFT140Q96RY7 RNA5SP62-201ENST00000363457 110 ntBASIC1.43□□□□□ -2.18
IFT140Q96RY7 DSTNP4-201ENST00000399472 474 ntBASIC1.43□□□□□ -2.18
IFT140Q96RY7 RNA5SP193-201ENST00000410353 107 ntBASIC1.43□□□□□ -2.18
IFT140Q96RY7 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.43□□□□□ -2.18
IFT140Q96RY7 RPL30P4-201ENST00000429309 333 ntBASIC1.43□□□□□ -2.18
IFT140Q96RY7 TRAPPC13P1-201ENST00000435991 1062 ntBASIC1.43□□□□□ -2.18
IFT140Q96RY7 YWHAZP8-201ENST00000436935 731 ntBASIC1.43□□□□□ -2.18
IFT140Q96RY7 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.43□□□□□ -2.18
IFT140Q96RY7 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.43□□□□□ -2.18
IFT140Q96RY7 RPS15AP27-201ENST00000449183 343 ntBASIC1.43□□□□□ -2.18
IFT140Q96RY7 AC114982.2-201ENST00000461396 358 ntBASIC1.43□□□□□ -2.18
IFT140Q96RY7 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC1.43□□□□□ -2.18
IFT140Q96RY7 MRPS33P3-201ENST00000513456 322 ntBASIC1.43□□□□□ -2.18
IFT140Q96RY7 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.43□□□□□ -2.18
IFT140Q96RY7 FAM60BP-201ENST00000578364 658 ntBASIC1.43□□□□□ -2.18
IFT140Q96RY7 MIR8087-201ENST00000612745 78 ntBASIC1.43□□□□□ -2.18
IFT140Q96RY7 AC079395.3-201ENST00000615161 484 ntBASIC1.43□□□□□ -2.18
IFT140Q96RY7 AC091304.6-201ENST00000619761 202 ntBASIC1.43□□□□□ -2.18
IFT140Q96RY7 AC091925.1-201ENST00000623204 462 ntBASIC1.43□□□□□ -2.18
IFT140Q96RY7 AC090517.3-201ENST00000625170 141 ntBASIC1.43□□□□□ -2.18
IFT140Q96RY7 Y_RNA.85-201ENST00000363014 111 ntBASIC1.43□□□□□ -2.18
IFT140Q96RY7 SNORD14B-201ENST00000364533 90 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms