Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 Y_RNA.182-201ENST00000363880 111 ntBASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 Y_RNA.420-201ENST00000384043 110 ntBASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 RNU6-318P-201ENST00000384283 103 ntBASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 MIR600-201ENST00000385007 98 ntBASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 RNU6-712P-201ENST00000410558 100 ntBASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 AL590399.6-201ENST00000446396 307 ntBASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 SNORA59A-201ENST00000459326 152 ntBASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 snoU13.3-201ENST00000459441 104 ntBASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 AC109327.1-201ENST00000471666 403 ntBASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 SNORD116-26-201ENST00000516006 96 ntBASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 MIR2117-201ENST00000516780 80 ntBASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 AC023632.4-201ENST00000517783 191 ntBASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 AC090616.3-201ENST00000582184 217 ntBASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 MIR3939-201ENST00000582614 106 ntBASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 MIR548AC-201ENST00000585049 88 ntBASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 BPIFA4P-203ENST00000603168 689 ntBASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 AL161756.2-201ENST00000604597 246 ntBASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 RMST_4.1-201ENST00000616886 107 ntBASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 ZYXP1-201ENST00000617638 118 ntBASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 AC112200.1-201ENST00000625015 234 ntBASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 AC110491.1-201ENST00000562191 2010 ntBASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 RNU6-1249P-201ENST00000363237 111 ntBASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 RNU6-899P-201ENST00000363947 107 ntBASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 RNU6-211P-201ENST00000384047 107 ntBASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 U3.30-201ENST00000391308 210 ntBASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 MIR298-201ENST00000401212 88 ntBASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 AL732292.1-201ENST00000426692 226 ntBASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 RPS23P2-201ENST00000463671 415 ntBASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 RPL23AP2-201ENST00000471227 466 ntBASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 RNU1-86P-201ENST00000516108 154 ntBASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 RNU1-107P-201ENST00000516617 154 ntBASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 TRAV28-201ENST00000557548 323 ntBASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 SNORD91B-202ENST00000608459 222 ntBASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 MIR6075-201ENST00000620782 95 ntBASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.04□□□□□ -1.6
CNTNAP3BQ96NU0 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CNTNAP3BQ96NU0 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CNTNAP3BQ96NU0 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNTNAP3BQ96NU0 AL138820.1-201ENST00000617901 5305 ntBASIC5.03□□□□□ -1.6
CNTNAP3BQ96NU0 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.03□□□□□ -1.6
CNTNAP3BQ96NU0 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CNTNAP3BQ96NU0 SNORA62.3-201ENST00000365110 153 ntBASIC5.03□□□□□ -1.6
CNTNAP3BQ96NU0 Y_RNA.570-201ENST00000384750 101 ntBASIC5.03□□□□□ -1.6
CNTNAP3BQ96NU0 RNA5SP372-201ENST00000390836 115 ntBASIC5.03□□□□□ -1.6
CNTNAP3BQ96NU0 RN7SKP100-201ENST00000411258 284 ntBASIC5.03□□□□□ -1.6
CNTNAP3BQ96NU0 RPS12P23-201ENST00000419579 400 ntBASIC5.03□□□□□ -1.6
CNTNAP3BQ96NU0 RPS20P1-201ENST00000434853 354 ntBASIC5.03□□□□□ -1.6
CNTNAP3BQ96NU0 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC5.03□□□□□ -1.6
CNTNAP3BQ96NU0 RPL12P18-201ENST00000437175 325 ntBASIC5.03□□□□□ -1.6
CNTNAP3BQ96NU0 AC016700.2-201ENST00000446011 156 ntBASIC5.03□□□□□ -1.6
CNTNAP3BQ96NU0 RN7SL197P-201ENST00000466981 299 ntBASIC5.03□□□□□ -1.6
CNTNAP3BQ96NU0 RPS15AP34-201ENST00000487776 387 ntBASIC5.03□□□□□ -1.6
CNTNAP3BQ96NU0 GLUD1P3-202ENST00000508551 200 ntBASIC5.03□□□□□ -1.6
CNTNAP3BQ96NU0 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms