Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 SNORD19.2-201ENST00000516978 73 ntBASIC2.38□□□□□ -2.03
PKNOX2Q96KN3 AC012435.1-202ENST00000568772 240 ntBASIC2.38□□□□□ -2.03
PKNOX2Q96KN3 SEPT7P9-203ENST00000604116 343 ntBASIC2.38□□□□□ -2.03
PKNOX2Q96KN3 AL158050.2-201ENST00000605336 568 ntBASIC2.38□□□□□ -2.03
PKNOX2Q96KN3 AC107075.1-201ENST00000613695 314 ntBASIC2.38□□□□□ -2.03
PKNOX2Q96KN3 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.38□□□□□ -2.03
PKNOX2Q96KN3 AC009268.2-201ENST00000621925 457 ntBASIC2.38□□□□□ -2.03
PKNOX2Q96KN3 DUXAP9-208ENST00000622815 614 ntBASIC2.38□□□□□ -2.03
PKNOX2Q96KN3 RNU6-859P-201ENST00000362728 107 ntBASIC2.37□□□□□ -2.03
PKNOX2Q96KN3 OR5H15-201ENST00000383696 930 ntBASIC2.37□□□□□ -2.03
PKNOX2Q96KN3 RNU6-114P-201ENST00000384704 105 ntBASIC2.37□□□□□ -2.03
PKNOX2Q96KN3 RNU2-52P-201ENST00000410680 190 ntBASIC2.37□□□□□ -2.03
PKNOX2Q96KN3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.37□□□□□ -2.03
PKNOX2Q96KN3 MTCYBP38-201ENST00000417160 1123 ntBASIC2.37□□□□□ -2.03
PKNOX2Q96KN3 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.37□□□□□ -2.03
PKNOX2Q96KN3 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.37□□□□□ -2.03
PKNOX2Q96KN3 FCF1P1-201ENST00000432690 571 ntBASIC2.37□□□□□ -2.03
PKNOX2Q96KN3 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.37□□□□□ -2.03
PKNOX2Q96KN3 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.37□□□□□ -2.03
PKNOX2Q96KN3 AP000936.2-201ENST00000447151 681 ntBASIC2.37□□□□□ -2.03
PKNOX2Q96KN3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.37□□□□□ -2.03
PKNOX2Q96KN3 MEMO1P3-201ENST00000459811 302 ntBASIC2.37□□□□□ -2.03
PKNOX2Q96KN3 AC109486.1-201ENST00000486833 374 ntBASIC2.37□□□□□ -2.03
PKNOX2Q96KN3 LINC00888-204ENST00000487386 421 ntBASIC2.37□□□□□ -2.03
PKNOX2Q96KN3 AC024589.1-201ENST00000512207 263 ntBASIC2.37□□□□□ -2.03
PKNOX2Q96KN3 SNORA70.24-201ENST00000517233 118 ntBASIC2.37□□□□□ -2.03
PKNOX2Q96KN3 AL359212.1-201ENST00000556608 614 ntBASIC2.37□□□□□ -2.03
PKNOX2Q96KN3 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.37□□□□□ -2.03
PKNOX2Q96KN3 AC005951.2-201ENST00000576282 495 ntBASIC2.37□□□□□ -2.03
PKNOX2Q96KN3 MIR4285-201ENST00000581001 85 ntBASIC2.37□□□□□ -2.03
PKNOX2Q96KN3 VN1R90P-201ENST00000595717 726 ntBASIC2.37□□□□□ -2.03
PKNOX2Q96KN3 AC012468.1-201ENST00000604888 430 ntBASIC2.37□□□□□ -2.03
PKNOX2Q96KN3 MTND4LP5-201ENST00000605152 292 ntBASIC2.37□□□□□ -2.03
PKNOX2Q96KN3 AC126118.1-201ENST00000607744 628 ntBASIC2.37□□□□□ -2.03
PKNOX2Q96KN3 AC245297.2-201ENST00000610119 565 ntBASIC2.37□□□□□ -2.03
PKNOX2Q96KN3 MIR6766-201ENST00000622641 72 ntBASIC2.37□□□□□ -2.03
PKNOX2Q96KN3 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.37□□□□□ -2.03
PKNOX2Q96KN3 AC116618.1-201ENST00000634617 774 ntBASIC2.37□□□□□ -2.03
PKNOX2Q96KN3 AC110491.1-201ENST00000562191 2010 ntBASIC2.37□□□□□ -2.03
PKNOX2Q96KN3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 Y_RNA.192-201ENST00000363977 102 ntBASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 RNA5SP160-201ENST00000364866 120 ntBASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 RNU6-744P-201ENST00000365557 107 ntBASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 RNU6-1316P-201ENST00000384242 108 ntBASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 RNU6-1176P-201ENST00000390955 107 ntBASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 RNU6-754P-201ENST00000391166 107 ntBASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 RNU4-22P-201ENST00000411058 166 ntBASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 MTND1P21-201ENST00000412991 285 ntBASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 ARL5AP4-201ENST00000430731 512 ntBASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 SNRPEP7-201ENST00000438350 220 ntBASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 USP9YP10-201ENST00000454868 628 ntBASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 SNORD109B-201ENST00000458961 67 ntBASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 SNORD109A-201ENST00000459128 67 ntBASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 AC021146.8-201ENST00000507455 733 ntBASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 RN7SKP24-201ENST00000515888 284 ntBASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 NRON-201ENST00000517270 370 ntBASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 RNU6-840P-201ENST00000517275 65 ntBASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 DUXAP1-201ENST00000556632 463 ntBASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 AL049838.1-201ENST00000563647 981 ntBASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 AL078605.1-201ENST00000603529 500 ntBASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 MTND3P19-201ENST00000603825 345 ntBASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 AL138963.2-201ENST00000605137 226 ntBASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 AC006270.3-201ENST00000605967 1036 ntBASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 AC090186.1-201ENST00000605991 572 ntBASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 AL121652.1-201ENST00000608851 448 ntBASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 AL442067.2-201ENST00000614033 363 ntBASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 AC091953.2-201ENST00000623979 160 ntBASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 AC093591.3-201ENST00000634516 308 ntBASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 AL138713.1-201ENST00000624026 2130 ntBASIC2.36□□□□□ -2.03
PKNOX2Q96KN3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
PKNOX2Q96KN3 SNORD116.1-201ENST00000365628 92 ntBASIC2.35□□□□□ -2.03
PKNOX2Q96KN3 Y_RNA.465-201ENST00000384293 102 ntBASIC2.35□□□□□ -2.03
PKNOX2Q96KN3 AL109755.1-201ENST00000401791 649 ntBASIC2.35□□□□□ -2.03
PKNOX2Q96KN3 RN7SKP140-201ENST00000411196 284 ntBASIC2.35□□□□□ -2.03
PKNOX2Q96KN3 RNA5SP450-201ENST00000411206 102 ntBASIC2.35□□□□□ -2.03
PKNOX2Q96KN3 RNU6-516P-201ENST00000411381 104 ntBASIC2.35□□□□□ -2.03
PKNOX2Q96KN3 NDUFS5P4-201ENST00000412983 318 ntBASIC2.35□□□□□ -2.03
PKNOX2Q96KN3 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.35□□□□□ -2.03
PKNOX2Q96KN3 BPY2DP-201ENST00000422208 265 ntBASIC2.35□□□□□ -2.03
PKNOX2Q96KN3 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.35□□□□□ -2.03
PKNOX2Q96KN3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.35□□□□□ -2.03
PKNOX2Q96KN3 COX7BP2-201ENST00000437976 242 ntBASIC2.35□□□□□ -2.03
PKNOX2Q96KN3 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.35□□□□□ -2.03
PKNOX2Q96KN3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.35□□□□□ -2.03
PKNOX2Q96KN3 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.35□□□□□ -2.03
PKNOX2Q96KN3 snoU109.3-201ENST00000459477 145 ntBASIC2.35□□□□□ -2.03
PKNOX2Q96KN3 S100A11P2-201ENST00000467589 312 ntBASIC2.35□□□□□ -2.03
PKNOX2Q96KN3 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.35□□□□□ -2.03
PKNOX2Q96KN3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms