Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 AP001646.1-201ENST00000527936 915 ntBASIC4.04□□□□□ -1.76
CCDC136Q96JN2 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC136Q96JN2 NCAPGP2-201ENST00000557911 754 ntBASIC4.04□□□□□ -1.76
CCDC136Q96JN2 H3F3AP1-201ENST00000559984 334 ntBASIC4.04□□□□□ -1.76
CCDC136Q96JN2 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC136Q96JN2 AL158032.1-201ENST00000605401 106 ntBASIC4.04□□□□□ -1.76
CCDC136Q96JN2 AL161629.2-201ENST00000615347 275 ntBASIC4.04□□□□□ -1.76
CCDC136Q96JN2 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.04□□□□□ -1.76
CCDC136Q96JN2 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC136Q96JN2 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC136Q96JN2 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC136Q96JN2 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC136Q96JN2 AC010680.1-201ENST00000590024 3590 ntBASIC4.03□□□□□ -1.76
CCDC136Q96JN2 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC136Q96JN2 Y_RNA.194-201ENST00000363985 102 ntBASIC4.03□□□□□ -1.76
CCDC136Q96JN2 Y_RNA.367-201ENST00000365544 101 ntBASIC4.03□□□□□ -1.76
CCDC136Q96JN2 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC136Q96JN2 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC136Q96JN2 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC136Q96JN2 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC136Q96JN2 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC136Q96JN2 RPS20P5-201ENST00000434808 360 ntBASIC4.03□□□□□ -1.76
CCDC136Q96JN2 RPS15AP9-201ENST00000439856 381 ntBASIC4.03□□□□□ -1.76
CCDC136Q96JN2 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.03□□□□□ -1.76
CCDC136Q96JN2 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.03□□□□□ -1.76
CCDC136Q96JN2 RPS29P12-201ENST00000460178 152 ntBASIC4.03□□□□□ -1.76
CCDC136Q96JN2 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC136Q96JN2 RN7SKP43-201ENST00000516173 320 ntBASIC4.03□□□□□ -1.76
CCDC136Q96JN2 RNU6-405P-201ENST00000516637 110 ntBASIC4.03□□□□□ -1.76
CCDC136Q96JN2 MTCYBP20-201ENST00000524239 1129 ntBASIC4.03□□□□□ -1.76
CCDC136Q96JN2 OR5B10P-201ENST00000532869 642 ntBASIC4.03□□□□□ -1.76
CCDC136Q96JN2 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC136Q96JN2 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC136Q96JN2 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC136Q96JN2 AC103987.3-201ENST00000582071 292 ntBASIC4.03□□□□□ -1.76
CCDC136Q96JN2 BNIP3P9-201ENST00000603714 553 ntBASIC4.03□□□□□ -1.76
CCDC136Q96JN2 AL139286.2-201ENST00000606838 396 ntBASIC4.03□□□□□ -1.76
CCDC136Q96JN2 uc_338.25-201ENST00000613756 156 ntBASIC4.03□□□□□ -1.76
CCDC136Q96JN2 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.03□□□□□ -1.76
CCDC136Q96JN2 AC093648.1-201ENST00000623546 606 ntBASIC4.03□□□□□ -1.76
CCDC136Q96JN2 AL512643.1-201ENST00000635735 524 ntBASIC4.03□□□□□ -1.76
CCDC136Q96JN2 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC136Q96JN2 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC136Q96JN2 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.77
CCDC136Q96JN2 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
CCDC136Q96JN2 RNU6-456P-201ENST00000384493 107 ntBASIC4.02□□□□□ -1.77
CCDC136Q96JN2 MIR23B-201ENST00000384832 97 ntBASIC4.02□□□□□ -1.77
CCDC136Q96JN2 MIR449B-201ENST00000384995 97 ntBASIC4.02□□□□□ -1.77
CCDC136Q96JN2 MIR218-2-201ENST00000385006 110 ntBASIC4.02□□□□□ -1.77
CCDC136Q96JN2 AL357075.1-201ENST00000404107 726 ntBASIC4.02□□□□□ -1.77
CCDC136Q96JN2 RNU2-68P-201ENST00000410878 191 ntBASIC4.02□□□□□ -1.77
CCDC136Q96JN2 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC136Q96JN2 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC136Q96JN2 CYCSP32-201ENST00000440548 321 ntBASIC4.02□□□□□ -1.77
CCDC136Q96JN2 RPL21P23-201ENST00000446654 460 ntBASIC4.02□□□□□ -1.77
CCDC136Q96JN2 VN1R34P-201ENST00000447387 883 ntBASIC4.02□□□□□ -1.77
CCDC136Q96JN2 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC136Q96JN2 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC136Q96JN2 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
CCDC136Q96JN2 RNU6-914P-201ENST00000516749 109 ntBASIC4.02□□□□□ -1.77
CCDC136Q96JN2 SNORA31.21-201ENST00000517180 77 ntBASIC4.02□□□□□ -1.77
CCDC136Q96JN2 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.02□□□□□ -1.77
CCDC136Q96JN2 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.02□□□□□ -1.77
CCDC136Q96JN2 HSPE1P20-201ENST00000538133 289 ntBASIC4.02□□□□□ -1.77
CCDC136Q96JN2 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC136Q96JN2 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC136Q96JN2 AC009063.1-201ENST00000563342 702 ntBASIC4.02□□□□□ -1.77
CCDC136Q96JN2 MTCYBP33-201ENST00000575007 1130 ntBASIC4.02□□□□□ -1.77
CCDC136Q96JN2 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
CCDC136Q96JN2 MIR4276-201ENST00000584832 70 ntBASIC4.02□□□□□ -1.77
CCDC136Q96JN2 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.02□□□□□ -1.77
CCDC136Q96JN2 AC068790.2-201ENST00000602601 557 ntBASIC4.02□□□□□ -1.77
CCDC136Q96JN2 AC091805.2-201ENST00000603848 235 ntBASIC4.02□□□□□ -1.77
CCDC136Q96JN2 Z99129.1-201ENST00000612510 255 ntBASIC4.02□□□□□ -1.77
CCDC136Q96JN2 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.02□□□□□ -1.77
CCDC136Q96JN2 Y_RNA.534-201ENST00000384599 112 ntBASIC4.01□□□□□ -1.77
CCDC136Q96JN2 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.01□□□□□ -1.77
CCDC136Q96JN2 BX323014.1-201ENST00000412876 237 ntBASIC4.01□□□□□ -1.77
CCDC136Q96JN2 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC136Q96JN2 SKA2P1-201ENST00000425592 390 ntBASIC4.01□□□□□ -1.77
CCDC136Q96JN2 MTCO2P11-201ENST00000431069 680 ntBASIC4.01□□□□□ -1.77
CCDC136Q96JN2 MTCO3P5-201ENST00000433620 714 ntBASIC4.01□□□□□ -1.77
CCDC136Q96JN2 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC136Q96JN2 RPS26P21-201ENST00000475397 348 ntBASIC4.01□□□□□ -1.77
CCDC136Q96JN2 AC116562.3-201ENST00000506136 177 ntBASIC4.01□□□□□ -1.77
CCDC136Q96JN2 RNU6-123P-201ENST00000516163 102 ntBASIC4.01□□□□□ -1.77
CCDC136Q96JN2 AP003392.2-201ENST00000527269 208 ntBASIC4.01□□□□□ -1.77
CCDC136Q96JN2 AC068587.5-201ENST00000528506 175 ntBASIC4.01□□□□□ -1.77
CCDC136Q96JN2 SUB1P2-201ENST00000556401 297 ntBASIC4.01□□□□□ -1.77
CCDC136Q96JN2 AGGF1P4-201ENST00000568249 801 ntBASIC4.01□□□□□ -1.77
CCDC136Q96JN2 AC024220.1-201ENST00000603675 484 ntBASIC4.01□□□□□ -1.77
CCDC136Q96JN2 AC099506.2-201ENST00000623074 221 ntBASIC4.01□□□□□ -1.77
CCDC136Q96JN2 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC136Q96JN2 AC008669.1-201ENST00000565823 2178 ntBASIC4.01□□□□□ -1.77
CCDC136Q96JN2 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC136Q96JN2 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC136Q96JN2 SNORA71.3-201ENST00000362582 128 ntBASIC4□□□□□ -1.77
CCDC136Q96JN2 RNU6-61P-201ENST00000365528 109 ntBASIC4□□□□□ -1.77
CCDC136Q96JN2 RNU6-74P-201ENST00000384235 107 ntBASIC4□□□□□ -1.77
CCDC136Q96JN2 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms