Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.25□□□□□ -1.57
VTI1AQ96AJ9 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.25□□□□□ -1.57
VTI1AQ96AJ9 MIR892C-201ENST00000516410 77 ntBASIC5.25□□□□□ -1.57
VTI1AQ96AJ9 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC5.25□□□□□ -1.57
VTI1AQ96AJ9 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.25□□□□□ -1.57
VTI1AQ96AJ9 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.25□□□□□ -1.57
VTI1AQ96AJ9 AL157871.3-201ENST00000557231 293 ntBASIC5.25□□□□□ -1.57
VTI1AQ96AJ9 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.25□□□□□ -1.57
VTI1AQ96AJ9 AC093249.4-201ENST00000564755 259 ntBASIC5.25□□□□□ -1.57
VTI1AQ96AJ9 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.25□□□□□ -1.57
VTI1AQ96AJ9 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VTI1AQ96AJ9 MIR1273C-201ENST00000578669 77 ntBASIC5.25□□□□□ -1.57
VTI1AQ96AJ9 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VTI1AQ96AJ9 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.25□□□□□ -1.57
VTI1AQ96AJ9 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
VTI1AQ96AJ9 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
VTI1AQ96AJ9 AL365440.1-201ENST00000436135 2167 ntBASIC5.25□□□□□ -1.57
VTI1AQ96AJ9 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.25□□□□□ -1.57
VTI1AQ96AJ9 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VTI1AQ96AJ9 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VTI1AQ96AJ9 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC5.25□□□□□ -1.57
VTI1AQ96AJ9 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VTI1AQ96AJ9 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 Y_RNA.64-201ENST00000362845 102 ntBASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 Y_RNA.350-201ENST00000365409 98 ntBASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 Y_RNA.533-201ENST00000384596 114 ntBASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 Y_RNA.552-201ENST00000384665 112 ntBASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 AL603908.1-201ENST00000406098 201 ntBASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 AL513475.1-201ENST00000406602 315 ntBASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 MIR548I3-201ENST00000408378 149 ntBASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 MIR548I1-201ENST00000408810 149 ntBASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 RPS3AP46-201ENST00000448352 682 ntBASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 MTCO3P8-201ENST00000453691 755 ntBASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 RPL7AP28-201ENST00000464513 571 ntBASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 HMGN1P11-201ENST00000508668 303 ntBASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 MTND1P19-201ENST00000511780 315 ntBASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 AC022968.1-201ENST00000567372 442 ntBASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 MIR3160-1-201ENST00000577972 85 ntBASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 MIR1244-1-201ENST00000612829 85 ntBASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 FP236240.3-201ENST00000623061 327 ntBASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 MIR1244-3-201ENST00000635744 85 ntBASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 MIR1244-2-201ENST00000636449 85 ntBASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 MIR1244-4-202ENST00000636813 85 ntBASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 AP001642.1-201ENST00000624727 2117 ntBASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.24□□□□□ -1.57
VTI1AQ96AJ9 AC083843.3-201ENST00000623679 2186 ntBASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 RNU5A-1-201ENST00000362698 116 ntBASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 RNA5SP515-201ENST00000364570 118 ntBASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 RNU6-1317P-201ENST00000364582 104 ntBASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 U8.8-201ENST00000365399 135 ntBASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 Y_RNA.376-201ENST00000365638 108 ntBASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 Y_RNA.551-201ENST00000384661 102 ntBASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 SNORA48.7-201ENST00000391302 135 ntBASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 RNU2-38P-201ENST00000410856 79 ntBASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 AL645608.4-201ENST00000423619 154 ntBASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 AC091390.3-201ENST00000426478 338 ntBASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 AC092573.2-201ENST00000434546 243 ntBASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 AC004938.1-201ENST00000438468 308 ntBASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 AC073587.1-201ENST00000447093 876 ntBASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 NUTF2P3-201ENST00000448540 384 ntBASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 AP000873.1-201ENST00000463987 400 ntBASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 AC110792.1-201ENST00000491826 472 ntBASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 SNORA25.11-201ENST00000515935 105 ntBASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 RNU7-4P-201ENST00000516961 62 ntBASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 AC090517.1-201ENST00000569307 266 ntBASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 MIR3138-201ENST00000585238 82 ntBASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 AC004805.2-201ENST00000605382 482 ntBASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 AC114781.5-201ENST00000615297 108 ntBASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 AC103858.2-201ENST00000621471 543 ntBASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 OR4G2P-202ENST00000641004 1759 ntBASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms