Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
TRAF3IP1Q8TDR0 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 RNU6-512P-201ENST00000364438 103 ntBASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 SMIM11P1-201ENST00000369586 178 ntBASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 RNU1-73P-201ENST00000383971 164 ntBASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 MRPL42P2-201ENST00000403169 426 ntBASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 AC023141.4-201ENST00000412031 328 ntBASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 RPL26P27-201ENST00000414397 437 ntBASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 MTND2P18-201ENST00000419962 1030 ntBASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 CYCSP46-201ENST00000423569 204 ntBASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 SKA2P1-201ENST00000425592 390 ntBASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 AC098614.2-201ENST00000426040 255 ntBASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 AL358075.3-201ENST00000426289 226 ntBASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 USP9YP15-201ENST00000442391 422 ntBASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 NANOGNBP1-201ENST00000448444 480 ntBASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 AC126182.1-201ENST00000478134 357 ntBASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 RPL39P36-201ENST00000490784 156 ntBASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 AC010587.1-201ENST00000505809 469 ntBASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 NDUFB4P2-201ENST00000509515 391 ntBASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 SNORA74D-201ENST00000516404 141 ntBASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 NACAP3-201ENST00000552100 481 ntBASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 RPL21P5-201ENST00000554662 472 ntBASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 HMGN1P30-201ENST00000589286 268 ntBASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 AL035413.2-201ENST00000604801 525 ntBASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 MTND4LP5-201ENST00000605152 292 ntBASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 AC019226.2-201ENST00000625973 424 ntBASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 ELF2P3-201ENST00000445099 1506 ntBASIC2.86□□□□□ -1.95
TRAF3IP1Q8TDR0 MIR627-201ENST00000384979 97 ntBASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 SNORA11-201ENST00000408789 128 ntBASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 AL139132.1-201ENST00000431587 344 ntBASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 AC098831.1-201ENST00000440661 216 ntBASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 PGBD4P3-201ENST00000440731 581 ntBASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 RPL31P41-201ENST00000477967 372 ntBASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 RPS29P20-201ENST00000489592 171 ntBASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 RPS27AP10-201ENST00000496103 208 ntBASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 Y_RNA.672-201ENST00000516289 104 ntBASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 RPPH1-2P-201ENST00000516688 293 ntBASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 RNU6-703P-201ENST00000516946 107 ntBASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 SNORA70.24-201ENST00000517233 118 ntBASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 AC109446.2-201ENST00000567872 497 ntBASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 AF131215.7-201ENST00000602443 707 ntBASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 AL355598.1-201ENST00000604169 202 ntBASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 AC108479.2-201ENST00000617314 601 ntBASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 UCA1.1-201ENST00000620952 75 ntBASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 MTND5P42-201ENST00000637720 498 ntBASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 ASNSP3-201ENST00000451989 1306 ntBASIC2.85□□□□□ -1.95
TRAF3IP1Q8TDR0 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
TRAF3IP1Q8TDR0 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
TRAF3IP1Q8TDR0 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
TRAF3IP1Q8TDR0 MT-TH-201ENST00000387441 69 ntBASIC2.84□□□□□ -1.95
TRAF3IP1Q8TDR0 SNORA48.5-201ENST00000391143 135 ntBASIC2.84□□□□□ -1.95
TRAF3IP1Q8TDR0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.84□□□□□ -1.95
TRAF3IP1Q8TDR0 UBA52P6-201ENST00000399822 382 ntBASIC2.84□□□□□ -1.95
TRAF3IP1Q8TDR0 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.84□□□□□ -1.95
TRAF3IP1Q8TDR0 RNU2-8P-201ENST00000410727 190 ntBASIC2.84□□□□□ -1.95
TRAF3IP1Q8TDR0 RNU2-25P-201ENST00000411041 191 ntBASIC2.84□□□□□ -1.95
TRAF3IP1Q8TDR0 RPS12P24-201ENST00000412619 387 ntBASIC2.84□□□□□ -1.95
TRAF3IP1Q8TDR0 AL096701.2-201ENST00000416920 238 ntBASIC2.84□□□□□ -1.95
TRAF3IP1Q8TDR0 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.84□□□□□ -1.95
TRAF3IP1Q8TDR0 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
TRAF3IP1Q8TDR0 AL589872.1-201ENST00000426602 288 ntBASIC2.84□□□□□ -1.95
TRAF3IP1Q8TDR0 RPL36AP53-201ENST00000432891 316 ntBASIC2.84□□□□□ -1.95
TRAF3IP1Q8TDR0 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.84□□□□□ -1.95
TRAF3IP1Q8TDR0 RPS15AP5-201ENST00000436276 388 ntBASIC2.84□□□□□ -1.95
TRAF3IP1Q8TDR0 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.84□□□□□ -1.95
TRAF3IP1Q8TDR0 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.84□□□□□ -1.95
TRAF3IP1Q8TDR0 RPS15AP27-201ENST00000449183 343 ntBASIC2.84□□□□□ -1.95
TRAF3IP1Q8TDR0 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.84□□□□□ -1.95
TRAF3IP1Q8TDR0 MTATP6P7-201ENST00000453315 681 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms