Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC087369.1-201ENST00000520775 996 ntBASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 MRPL49P2-201ENST00000521066 465 ntBASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 AC018442.3-201ENST00000523025 183 ntBASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 BNIP3P5-201ENST00000562290 498 ntBASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 OR1M4P-201ENST00000589199 287 ntBASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 IPO5P1-202ENST00000600039 287 ntBASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 AP001485.1-201ENST00000604799 199 ntBASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 AC005344.1-201ENST00000613391 459 ntBASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 U2.14-201ENST00000615943 113 ntBASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 AC068254.2-201ENST00000623938 3577 ntBASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 ZNF299P-201ENST00000406845 1804 ntBASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 LINC01109-201ENST00000603837 3081 ntBASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 AC007529.1-201ENST00000418574 2178 ntBASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 Y_RNA.76-201ENST00000362931 109 ntBASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 RNA5SP366-201ENST00000365454 123 ntBASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 RNU6-14P-201ENST00000384630 106 ntBASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 Y_RNA.541-201ENST00000384640 113 ntBASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 MTND3P9-201ENST00000429526 346 ntBASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 CYCSP43-201ENST00000438233 310 ntBASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 UQCRHP4-201ENST00000471686 272 ntBASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 AC105137.1-201ENST00000484355 562 ntBASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 SNORA31.9-201ENST00000516429 84 ntBASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 RNU6-352P-201ENST00000516908 107 ntBASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 SCARNA24.2-201ENST00000516968 130 ntBASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 TRAV32-201ENST00000553993 340 ntBASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 HNRNPCP4-201ENST00000571636 900 ntBASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 Z83818.1-201ENST00000603584 150 ntBASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 AL121917.1-203ENST00000605534 577 ntBASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 AC023043.4-201ENST00000612081 449 ntBASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 AL023881.1-201ENST00000621088 301 ntBASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 AL031601.2-202ENST00000622650 282 ntBASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 MIR3653-201ENST00000625572 110 ntBASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 ZNF285B-201ENST00000561698 1767 ntBASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 AC092079.1-201ENST00000558620 1985 ntBASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 LINC02555-201ENST00000563933 1951 ntBASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHKBP1Q8TBC3 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 DDX10P1-201ENST00000448545 1933 ntBASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 SAGE4P-201ENST00000442271 3381 ntBASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 RNU6-1290P-201ENST00000362957 109 ntBASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 RNU1-132P-201ENST00000364300 164 ntBASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 RNVU1-3-201ENST00000364313 161 ntBASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 U8.8-201ENST00000365399 135 ntBASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 Y_RNA.581-201ENST00000391017 97 ntBASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 RNU6-700P-201ENST00000391043 107 ntBASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 AL513475.1-201ENST00000406602 315 ntBASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 RPL21P90-201ENST00000415692 466 ntBASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 AL159987.2-201ENST00000432754 307 ntBASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 VN1R105P-201ENST00000486595 910 ntBASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 AC010469.2-201ENST00000496412 480 ntBASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 FTH1P24-201ENST00000503502 462 ntBASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 AP003730.1-201ENST00000524605 285 ntBASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 TRAV8-5-201ENST00000537369 341 ntBASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 AC015912.2-201ENST00000571053 181 ntBASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 AC005951.2-201ENST00000576282 495 ntBASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 AC113403.1-201ENST00000604910 193 ntBASIC4.66□□□□□ -1.66
SHKBP1Q8TBC3 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms