Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 Z85995.1-201ENST00000415547 335 ntBASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 RPL17P36-201ENST00000420302 549 ntBASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 TPT1P12-201ENST00000448968 492 ntBASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 ANP32BP2-201ENST00000454525 545 ntBASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 SUMO2P18-201ENST00000518873 252 ntBASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 RN7SL356P-201ENST00000582228 248 ntBASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 AC069307.1-201ENST00000602820 447 ntBASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 AL589674.2-201ENST00000604304 337 ntBASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 AC109583.2-201ENST00000617367 129 ntBASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 AL031595.2-201ENST00000624215 19071 ntBASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 Y_RNA.75-201ENST00000362927 97 ntBASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 RNU1-19P-201ENST00000363306 165 ntBASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 Y_RNA.319-201ENST00000365138 92 ntBASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 RNU6-741P-201ENST00000383889 107 ntBASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 RNU6-213P-201ENST00000384051 104 ntBASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 RNU6-1145P-201ENST00000384246 107 ntBASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 ELOCP19-201ENST00000411919 318 ntBASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 RPL7AP49-201ENST00000429522 581 ntBASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 AL591438.1-201ENST00000433508 581 ntBASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 RNU6-971P-201ENST00000516920 106 ntBASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 UBL5P4-201ENST00000562584 236 ntBASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 MIR548X2-201ENST00000579776 100 ntBASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 FKBP1AP1-201ENST00000594588 318 ntBASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 MIR8080-201ENST00000622224 89 ntBASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 SCARNA4-202ENST00000625402 129 ntBASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC116Q8IYX3 AC026951.1-201ENST00000559530 2459 ntBASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 MIR323A-201ENST00000362199 86 ntBASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 MIR133B-201ENST00000362210 119 ntBASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 Y_RNA.182-201ENST00000363880 111 ntBASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 RNA5SP242-201ENST00000364171 118 ntBASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 RNU6-72P-201ENST00000384285 79 ntBASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 RNA5SP241-201ENST00000391326 114 ntBASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 HLFP1-201ENST00000402375 499 ntBASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 RNA5SP44-201ENST00000410446 133 ntBASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 RN7SKP206-201ENST00000410823 293 ntBASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 RPL19P16-201ENST00000433839 588 ntBASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 AL512844.2-201ENST00000433990 593 ntBASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 AC005154.2-201ENST00000438110 379 ntBASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 RN7SL547P-201ENST00000490793 290 ntBASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 SCARNA15.2-201ENST00000516409 127 ntBASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 AC027309.3-201ENST00000623419 351 ntBASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC116Q8IYX3 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms