Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 GSTA11P-201ENST00000452866 669 ntBASIC3.79□□□□□ -1.8
VRK3Q8IV63 RPS20P21-201ENST00000466859 343 ntBASIC3.79□□□□□ -1.8
VRK3Q8IV63 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VRK3Q8IV63 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.79□□□□□ -1.8
VRK3Q8IV63 Y_RNA.670-201ENST00000516255 105 ntBASIC3.79□□□□□ -1.8
VRK3Q8IV63 SCARNA14-201ENST00000516903 136 ntBASIC3.79□□□□□ -1.8
VRK3Q8IV63 RNU6-699P-201ENST00000517081 110 ntBASIC3.79□□□□□ -1.8
VRK3Q8IV63 AC087854.1-201ENST00000519706 414 ntBASIC3.79□□□□□ -1.8
VRK3Q8IV63 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VRK3Q8IV63 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.79□□□□□ -1.8
VRK3Q8IV63 AC107016.1-201ENST00000550463 337 ntBASIC3.79□□□□□ -1.8
VRK3Q8IV63 AC053481.4-201ENST00000583164 216 ntBASIC3.79□□□□□ -1.8
VRK3Q8IV63 BNIP3P16-201ENST00000589779 534 ntBASIC3.79□□□□□ -1.8
VRK3Q8IV63 AC007566.2-201ENST00000603642 413 ntBASIC3.79□□□□□ -1.8
VRK3Q8IV63 AC018889.1-201ENST00000605372 397 ntBASIC3.79□□□□□ -1.8
VRK3Q8IV63 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.79□□□□□ -1.8
VRK3Q8IV63 AC107871.2-201ENST00000612894 502 ntBASIC3.79□□□□□ -1.8
VRK3Q8IV63 MIR6128-201ENST00000615528 109 ntBASIC3.79□□□□□ -1.8
VRK3Q8IV63 AL732372.2-225ENST00000642124 456 ntBASIC3.79□□□□□ -1.8
VRK3Q8IV63 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VRK3Q8IV63 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
VRK3Q8IV63 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
VRK3Q8IV63 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
VRK3Q8IV63 LINC02471-203ENST00000641941 4752 ntBASIC3.79□□□□□ -1.8
VRK3Q8IV63 AL359893.1-201ENST00000447628 1580 ntBASIC3.79□□□□□ -1.8
VRK3Q8IV63 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.79□□□□□ -1.8
VRK3Q8IV63 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.79□□□□□ -1.8
VRK3Q8IV63 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VRK3Q8IV63 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.79□□□□□ -1.8
VRK3Q8IV63 AC090971.4-201ENST00000560291 1800 ntBASIC3.79□□□□□ -1.8
VRK3Q8IV63 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VRK3Q8IV63 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VRK3Q8IV63 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VRK3Q8IV63 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.78□□□□□ -1.8
VRK3Q8IV63 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
VRK3Q8IV63 RNU6-379P-201ENST00000363813 104 ntBASIC3.78□□□□□ -1.8
VRK3Q8IV63 SMIM11P1-201ENST00000369586 178 ntBASIC3.78□□□□□ -1.8
VRK3Q8IV63 RNU6-26P-201ENST00000383985 107 ntBASIC3.78□□□□□ -1.8
VRK3Q8IV63 MIR199A2-201ENST00000385289 110 ntBASIC3.78□□□□□ -1.8
VRK3Q8IV63 Y_RNA.594-201ENST00000410373 140 ntBASIC3.78□□□□□ -1.8
VRK3Q8IV63 RN7SKP159-201ENST00000410657 292 ntBASIC3.78□□□□□ -1.8
VRK3Q8IV63 RPL7P37-201ENST00000425095 738 ntBASIC3.78□□□□□ -1.8
VRK3Q8IV63 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.78□□□□□ -1.8
VRK3Q8IV63 RPS29P7-201ENST00000439662 171 ntBASIC3.78□□□□□ -1.8
VRK3Q8IV63 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.78□□□□□ -1.8
VRK3Q8IV63 RPL21P11-201ENST00000461458 483 ntBASIC3.78□□□□□ -1.8
VRK3Q8IV63 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.78□□□□□ -1.8
VRK3Q8IV63 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.78□□□□□ -1.8
VRK3Q8IV63 RN7SL432P-201ENST00000484057 298 ntBASIC3.78□□□□□ -1.8
VRK3Q8IV63 AC110794.1-201ENST00000505816 425 ntBASIC3.78□□□□□ -1.8
VRK3Q8IV63 RNU6-635P-201ENST00000516651 102 ntBASIC3.78□□□□□ -1.8
VRK3Q8IV63 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.78□□□□□ -1.8
VRK3Q8IV63 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VRK3Q8IV63 GNAI2P1-201ENST00000541815 315 ntBASIC3.78□□□□□ -1.8
VRK3Q8IV63 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.78□□□□□ -1.8
VRK3Q8IV63 AC090877.1-201ENST00000561418 344 ntBASIC3.78□□□□□ -1.8
VRK3Q8IV63 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.78□□□□□ -1.8
VRK3Q8IV63 AL670379.6-201ENST00000603753 252 ntBASIC3.78□□□□□ -1.8
VRK3Q8IV63 AC008162.1-201ENST00000604718 254 ntBASIC3.78□□□□□ -1.8
VRK3Q8IV63 AL670379.1-201ENST00000604752 252 ntBASIC3.78□□□□□ -1.8
VRK3Q8IV63 AL670379.5-201ENST00000605253 252 ntBASIC3.78□□□□□ -1.8
VRK3Q8IV63 AL670379.8-201ENST00000605353 252 ntBASIC3.78□□□□□ -1.8
VRK3Q8IV63 AL670379.7-201ENST00000605823 252 ntBASIC3.78□□□□□ -1.8
VRK3Q8IV63 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VRK3Q8IV63 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.78□□□□□ -1.8
VRK3Q8IV63 U2.17-201ENST00000611454 95 ntBASIC3.78□□□□□ -1.8
VRK3Q8IV63 ATP5A1P2-202ENST00000616464 443 ntBASIC3.78□□□□□ -1.8
VRK3Q8IV63 PISRT1.1-201ENST00000616930 107 ntBASIC3.78□□□□□ -1.8
VRK3Q8IV63 SNHG22-203ENST00000617833 660 ntBASIC3.78□□□□□ -1.8
VRK3Q8IV63 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.78□□□□□ -1.8
VRK3Q8IV63 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VRK3Q8IV63 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VRK3Q8IV63 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
VRK3Q8IV63 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.78□□□□□ -1.8
VRK3Q8IV63 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VRK3Q8IV63 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
VRK3Q8IV63 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
VRK3Q8IV63 XIAPP3-201ENST00000312918 795 ntBASIC3.77□□□□□ -1.81
VRK3Q8IV63 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VRK3Q8IV63 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.77□□□□□ -1.81
VRK3Q8IV63 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.77□□□□□ -1.81
VRK3Q8IV63 RNU6-946P-201ENST00000383878 107 ntBASIC3.77□□□□□ -1.81
VRK3Q8IV63 U1.1-201ENST00000384101 164 ntBASIC3.77□□□□□ -1.81
VRK3Q8IV63 RNU6-393P-201ENST00000384475 107 ntBASIC3.77□□□□□ -1.81
VRK3Q8IV63 RNU6-146P-201ENST00000384602 108 ntBASIC3.77□□□□□ -1.81
VRK3Q8IV63 RNU6-1109P-201ENST00000391187 107 ntBASIC3.77□□□□□ -1.81
VRK3Q8IV63 MIR1193-201ENST00000408109 78 ntBASIC3.77□□□□□ -1.81
VRK3Q8IV63 AL669831.1-202ENST00000428504 417 ntBASIC3.77□□□□□ -1.81
VRK3Q8IV63 AL591212.2-201ENST00000433923 257 ntBASIC3.77□□□□□ -1.81
VRK3Q8IV63 RPS20P1-201ENST00000434853 354 ntBASIC3.77□□□□□ -1.81
VRK3Q8IV63 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.77□□□□□ -1.81
VRK3Q8IV63 AC010655.1-201ENST00000449336 292 ntBASIC3.77□□□□□ -1.81
VRK3Q8IV63 AL583843.1-201ENST00000456070 346 ntBASIC3.77□□□□□ -1.81
VRK3Q8IV63 SNORD5.1-201ENST00000458800 75 ntBASIC3.77□□□□□ -1.81
VRK3Q8IV63 HMGB1P25-201ENST00000468402 607 ntBASIC3.77□□□□□ -1.81
VRK3Q8IV63 RN7SL323P-201ENST00000494712 295 ntBASIC3.77□□□□□ -1.81
VRK3Q8IV63 RPL23AP55-201ENST00000498163 452 ntBASIC3.77□□□□□ -1.81
VRK3Q8IV63 Y_RNA.661-201ENST00000516003 99 ntBASIC3.77□□□□□ -1.81
VRK3Q8IV63 RNU2-69P-201ENST00000516061 100 ntBASIC3.77□□□□□ -1.81
VRK3Q8IV63 RNU6-475P-201ENST00000516073 104 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms