Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM50Q86XT4 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM50Q86XT4 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.25□□□□□ -1.57
TRIM50Q86XT4 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM50Q86XT4 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM50Q86XT4 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
TRIM50Q86XT4 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM50Q86XT4 LINC01355-201ENST00000566551 5444 ntBASIC5.24□□□□□ -1.57
TRIM50Q86XT4 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM50Q86XT4 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM50Q86XT4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM50Q86XT4 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.24□□□□□ -1.57
TRIM50Q86XT4 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.24□□□□□ -1.57
TRIM50Q86XT4 RNU6-428P-201ENST00000362942 107 ntBASIC5.24□□□□□ -1.57
TRIM50Q86XT4 MIR124-3-201ENST00000384866 87 ntBASIC5.24□□□□□ -1.57
TRIM50Q86XT4 AL590762.2-201ENST00000395798 571 ntBASIC5.24□□□□□ -1.57
TRIM50Q86XT4 MORN2-203ENST00000409131 544 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM50Q86XT4 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.24□□□□□ -1.57
TRIM50Q86XT4 AC007738.1-201ENST00000413892 348 ntBASIC5.24□□□□□ -1.57
TRIM50Q86XT4 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM50Q86XT4 AC139712.2-201ENST00000424302 339 ntBASIC5.24□□□□□ -1.57
TRIM50Q86XT4 MTCO3P29-201ENST00000432119 779 ntBASIC5.24□□□□□ -1.57
TRIM50Q86XT4 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM50Q86XT4 HIGD1AP2-201ENST00000446367 280 ntBASIC5.24□□□□□ -1.57
TRIM50Q86XT4 H2AFZP5-201ENST00000446960 382 ntBASIC5.24□□□□□ -1.57
TRIM50Q86XT4 RN7SL385P-201ENST00000468873 276 ntBASIC5.24□□□□□ -1.57
TRIM50Q86XT4 AL359273.1-201ENST00000510918 627 ntBASIC5.24□□□□□ -1.57
TRIM50Q86XT4 AC074250.1-201ENST00000511117 192 ntBASIC5.24□□□□□ -1.57
TRIM50Q86XT4 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM50Q86XT4 RPL23AP53-201ENST00000521854 457 ntBASIC5.24□□□□□ -1.57
TRIM50Q86XT4 AL590705.4-201ENST00000532209 134 ntBASIC5.24□□□□□ -1.57
TRIM50Q86XT4 MED28P6-201ENST00000558776 231 ntBASIC5.24□□□□□ -1.57
TRIM50Q86XT4 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM50Q86XT4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM50Q86XT4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM50Q86XT4 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM50Q86XT4 BX005214.3-202ENST00000619809 325 ntBASIC5.24□□□□□ -1.57
TRIM50Q86XT4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM50Q86XT4 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.24□□□□□ -1.57
TRIM50Q86XT4 RLIMP1-201ENST00000339626 1680 ntBASIC5.24□□□□□ -1.57
TRIM50Q86XT4 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
TRIM50Q86XT4 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM50Q86XT4 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM50Q86XT4 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM50Q86XT4 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM50Q86XT4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.23□□□□□ -1.57
TRIM50Q86XT4 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM50Q86XT4 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
TRIM50Q86XT4 RNA5SP447-201ENST00000363749 119 ntBASIC5.23□□□□□ -1.57
TRIM50Q86XT4 RNU6-1062P-201ENST00000383908 107 ntBASIC5.23□□□□□ -1.57
TRIM50Q86XT4 MIR659-201ENST00000384963 97 ntBASIC5.23□□□□□ -1.57
TRIM50Q86XT4 RN7SKP267-201ENST00000410381 285 ntBASIC5.23□□□□□ -1.57
TRIM50Q86XT4 RNU2-25P-201ENST00000411041 191 ntBASIC5.23□□□□□ -1.57
TRIM50Q86XT4 ELOCP19-201ENST00000411919 318 ntBASIC5.23□□□□□ -1.57
TRIM50Q86XT4 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.23□□□□□ -1.57
TRIM50Q86XT4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM50Q86XT4 CYP4F29P-201ENST00000420685 446 ntBASIC5.23□□□□□ -1.57
TRIM50Q86XT4 AC007560.1-201ENST00000426912 237 ntBASIC5.23□□□□□ -1.57
TRIM50Q86XT4 AC092017.2-201ENST00000427600 362 ntBASIC5.23□□□□□ -1.57
TRIM50Q86XT4 RPL35AP21-201ENST00000437667 333 ntBASIC5.23□□□□□ -1.57
TRIM50Q86XT4 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM50Q86XT4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM50Q86XT4 AC139453.3-201ENST00000493276 369 ntBASIC5.23□□□□□ -1.57
TRIM50Q86XT4 GZMAP1-201ENST00000503054 631 ntBASIC5.23□□□□□ -1.57
TRIM50Q86XT4 SNORA31.19-201ENST00000517079 126 ntBASIC5.23□□□□□ -1.57
TRIM50Q86XT4 ATP5F1P5-201ENST00000526403 760 ntBASIC5.23□□□□□ -1.57
TRIM50Q86XT4 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC5.23□□□□□ -1.57
TRIM50Q86XT4 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM50Q86XT4 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
TRIM50Q86XT4 SRGNP1-201ENST00000603392 451 ntBASIC5.23□□□□□ -1.57
TRIM50Q86XT4 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.23□□□□□ -1.57
TRIM50Q86XT4 AC131238.1-201ENST00000617135 328 ntBASIC5.23□□□□□ -1.57
TRIM50Q86XT4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM50Q86XT4 AP001148.1-201ENST00000624124 2359 ntBASIC5.23□□□□□ -1.57
TRIM50Q86XT4 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM50Q86XT4 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM50Q86XT4 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
TRIM50Q86XT4 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
TRIM50Q86XT4 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
TRIM50Q86XT4 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
TRIM50Q86XT4 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
TRIM50Q86XT4 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM50Q86XT4 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
TRIM50Q86XT4 AC116096.1-201ENST00000566804 2314 ntBASIC5.22□□□□□ -1.57
TRIM50Q86XT4 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM50Q86XT4 RNU6-335P-201ENST00000364563 113 ntBASIC5.22□□□□□ -1.57
TRIM50Q86XT4 RNU6-200P-201ENST00000364743 107 ntBASIC5.22□□□□□ -1.57
TRIM50Q86XT4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM50Q86XT4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM50Q86XT4 TOMM22P1-201ENST00000418578 312 ntBASIC5.22□□□□□ -1.57
TRIM50Q86XT4 AL590135.1-201ENST00000422215 156 ntBASIC5.22□□□□□ -1.57
TRIM50Q86XT4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM50Q86XT4 AC109479.2-201ENST00000517842 174 ntBASIC5.22□□□□□ -1.57
TRIM50Q86XT4 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM50Q86XT4 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM50Q86XT4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM50Q86XT4 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM50Q86XT4 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.22□□□□□ -1.57
TRIM50Q86XT4 MIR3921-201ENST00000577308 85 ntBASIC5.22□□□□□ -1.57
TRIM50Q86XT4 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms