Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 UBE2FP1-201ENST00000416536 447 ntBASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 AL356968.1-201ENST00000416622 474 ntBASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 AC009161.1-201ENST00000417306 376 ntBASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 ERLEC1P1-201ENST00000433806 578 ntBASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 AC006028.1-201ENST00000438379 402 ntBASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 MTCO3P45-201ENST00000443036 613 ntBASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 RPL7P12-201ENST00000446719 750 ntBASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 MTND1P18-201ENST00000448191 573 ntBASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 AC078814.3-201ENST00000553036 491 ntBASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 AL132765.2-201ENST00000610812 351 ntBASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 AC009248.2-201ENST00000619826 254 ntBASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 RNU6-179P-201ENST00000363350 107 ntBASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 RNU6-61P-201ENST00000365528 109 ntBASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 RNU6-38P-201ENST00000384085 107 ntBASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 RNU6-1011P-201ENST00000384668 107 ntBASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 AL359634.1-202ENST00000404721 284 ntBASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 AL583834.1-201ENST00000406943 343 ntBASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 EEF1A1P40-201ENST00000412883 573 ntBASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 AC016831.2-201ENST00000417179 352 ntBASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 AC099677.1-201ENST00000420575 175 ntBASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 AL645937.1-202ENST00000421799 937 ntBASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 RPL35AP12-201ENST00000425362 338 ntBASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 DUTP6-201ENST00000425573 462 ntBASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 AC091390.3-201ENST00000426478 338 ntBASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 RPL23AP82-202ENST00000427528 469 ntBASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 GAPDHP27-201ENST00000447427 1020 ntBASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 AL118520.1-201ENST00000450770 291 ntBASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 snoU13.24-201ENST00000458998 104 ntBASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 RNU6-333P-201ENST00000459117 107 ntBASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 CENPBD1P1-201ENST00000464061 469 ntBASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 FTH1P9-201ENST00000513251 355 ntBASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 AC026801.2-201ENST00000515352 425 ntBASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 RNA5SP503-201ENST00000517047 117 ntBASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 RNU6-1314P-201ENST00000517139 104 ntBASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 OR5AL2P-201ENST00000532185 920 ntBASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 AC087241.2-201ENST00000535801 324 ntBASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 AC018630.1-201ENST00000541376 925 ntBASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 PSMA3P-201ENST00000555485 635 ntBASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 uc_338.32-201ENST00000615087 172 ntBASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 AC011155.2-201ENST00000623202 216 ntBASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 AL157700.1-201ENST00000561973 1432 ntBASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
UBE3BQ7Z3V4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 RNU6-188P-201ENST00000364207 107 ntBASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 SNORD115-7-201ENST00000365306 82 ntBASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 SNORA24.1-201ENST00000384401 135 ntBASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 Z92545.1-201ENST00000411782 234 ntBASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 RPS20P15-201ENST00000412792 311 ntBASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 AC018630.2-202ENST00000422992 927 ntBASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 AL365400.1-201ENST00000431854 640 ntBASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 RNU7-180P-201ENST00000459240 63 ntBASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 AC008481.1-201ENST00000463278 396 ntBASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 AC023141.12-201ENST00000512399 199 ntBASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 AC112206.3-201ENST00000514578 389 ntBASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 MIR2276-201ENST00000516886 89 ntBASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 AC107953.1-201ENST00000522216 297 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms