Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 AL158827.2-201ENST00000602494 330 ntBASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 MIR6780A-201ENST00000615089 68 ntBASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 LINC00901.1-201ENST00000617252 152 ntBASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 AL691447.3-201ENST00000635020 330 ntBASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 AC090971.4-201ENST00000560291 1800 ntBASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 AC011266.1-201ENST00000624119 3569 ntBASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 OR56A5-201ENST00000340110 738 ntBASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 Y_RNA.19-201ENST00000362462 99 ntBASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 RNU5A-1-201ENST00000362698 116 ntBASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 Y_RNA.276-201ENST00000364732 109 ntBASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 RNU1-63P-201ENST00000383902 164 ntBASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 RPS16P5-201ENST00000406501 404 ntBASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 AL513331.1-201ENST00000411908 397 ntBASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 AL590139.1-201ENST00000416267 400 ntBASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 AC092423.1-201ENST00000430165 186 ntBASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 RN7SL354P-201ENST00000469282 294 ntBASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 MTND1P19-201ENST00000511780 315 ntBASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 RNU6-1315P-201ENST00000517187 99 ntBASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 AC105129.1-201ENST00000560250 297 ntBASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 AC004584.2-201ENST00000570407 410 ntBASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 RN7SL690P-201ENST00000582087 240 ntBASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 AC096772.1-201ENST00000609146 564 ntBASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 AC099669.2-201ENST00000616549 437 ntBASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 AC091905.2-201ENST00000623143 306 ntBASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 ZNF962P-201ENST00000443465 3140 ntBASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF111Q6ZNA4 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 Y_RNA.14-201ENST00000362415 103 ntBASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 RNU6-770P-201ENST00000363929 105 ntBASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 RNU6-1317P-201ENST00000364582 104 ntBASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 RNVU1-6-201ENST00000364688 164 ntBASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 U3.42-201ENST00000408746 214 ntBASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 RPL37P18-201ENST00000411602 243 ntBASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 USP9YP7-201ENST00000436723 430 ntBASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 PTMAP3-201ENST00000447474 330 ntBASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 USP9YP32-201ENST00000452432 430 ntBASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 AC009963.2-201ENST00000453431 138 ntBASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 AC110792.1-201ENST00000491826 472 ntBASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 MIR892C-201ENST00000516410 77 ntBASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 AC144568.1-201ENST00000520139 137 ntBASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 AP006289.1-201ENST00000538089 277 ntBASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 TRAV37-201ENST00000553906 342 ntBASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 AC007375.1-201ENST00000554513 578 ntBASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 AL157871.3-201ENST00000557231 293 ntBASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 MIR4700-201ENST00000578311 74 ntBASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 MIR1273C-201ENST00000578669 77 ntBASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 CPDP1-201ENST00000579660 283 ntBASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 AC098826.3-201ENST00000603823 466 ntBASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 AC064801.1-201ENST00000612025 407 ntBASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 SCN1A-220ENST00000641603 12506 ntBASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.3□□□□□ -1.72
RNF111Q6ZNA4 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms