Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 RPL19P16-201ENST00000433839 588 ntBASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 AL162725.1-201ENST00000435405 301 ntBASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 AC243964.1-201ENST00000441814 261 ntBASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 PPIAP20-201ENST00000449839 135 ntBASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 AL450023.1-201ENST00000450868 751 ntBASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 AC140059.1-201ENST00000489238 361 ntBASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 AL132838.2-201ENST00000492041 314 ntBASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 AC025458.1-201ENST00000506046 166 ntBASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 AC108043.1-201ENST00000512696 574 ntBASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 IGKV3D-34-201ENST00000522638 302 ntBASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 AP004607.1-201ENST00000524456 203 ntBASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 OTX2-203ENST00000554559 715 ntTSL 5 BASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 AC006349.1-201ENST00000555526 235 ntBASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 MIR5695-201ENST00000579717 85 ntBASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 AL356157.2-201ENST00000605122 111 ntBASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 AP002826.1-201ENST00000608835 315 ntBASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 U6.99-201ENST00000637524 83 ntBASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.14□□□□□ -1.75
CDPF1Q6NVV7 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 Y_RNA.400-201ENST00000383963 111 ntBASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 RNU6-142P-201ENST00000384019 107 ntBASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 RNU6-213P-201ENST00000384051 104 ntBASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 SNORA51.9-201ENST00000384295 124 ntBASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 AC005042.1-201ENST00000393397 800 ntBASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 AL391361.1-201ENST00000405580 489 ntBASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 MTHFD2P2-201ENST00000407725 247 ntBASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 TBCAP2-201ENST00000416175 326 ntBASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 AC024067.1-201ENST00000426199 223 ntBASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 AL590383.1-201ENST00000428602 75 ntBASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 SNRPEP9-201ENST00000436794 238 ntBASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 ACA64.1-201ENST00000459171 127 ntBASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 RNU6-1198P-201ENST00000516904 67 ntBASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 HMGN2P36-201ENST00000529541 409 ntBASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 AC107016.1-201ENST00000550463 337 ntBASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 TRAV28-201ENST00000557548 323 ntBASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 TPRX1P1-201ENST00000557620 319 ntBASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 ZNF192P1-203ENST00000565888 810 ntBASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 AL590392.1-201ENST00000604960 446 ntBASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 SNX18P1Y-201ENST00000616231 511 ntBASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 AC091895.1-201ENST00000624494 256 ntBASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 MIR6715B-201ENST00000637172 77 ntBASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.13□□□□□ -1.75
CDPF1Q6NVV7 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.12□□□□□ -1.75
CDPF1Q6NVV7 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.12□□□□□ -1.75
CDPF1Q6NVV7 NEAT1-202ENST00000501122 22743 ntBASIC4.12□□□□□ -1.75
CDPF1Q6NVV7 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDPF1Q6NVV7 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.12□□□□□ -1.75
CDPF1Q6NVV7 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDPF1Q6NVV7 RNU6-653P-201ENST00000363074 106 ntBASIC4.12□□□□□ -1.75
CDPF1Q6NVV7 RNA5SP346-201ENST00000363541 121 ntBASIC4.12□□□□□ -1.75
CDPF1Q6NVV7 RNU6-449P-201ENST00000383914 107 ntBASIC4.12□□□□□ -1.75
CDPF1Q6NVV7 Y_RNA.488-201ENST00000384403 102 ntBASIC4.12□□□□□ -1.75
CDPF1Q6NVV7 SNORA17A-201ENST00000391185 133 ntBASIC4.12□□□□□ -1.75
CDPF1Q6NVV7 HLFP1-201ENST00000402375 499 ntBASIC4.12□□□□□ -1.75
CDPF1Q6NVV7 AL357139.1-201ENST00000407792 426 ntBASIC4.12□□□□□ -1.75
CDPF1Q6NVV7 RNU6-1245P-201ENST00000411130 106 ntBASIC4.12□□□□□ -1.75
CDPF1Q6NVV7 Y_RNA.629-201ENST00000411368 105 ntBASIC4.12□□□□□ -1.75
CDPF1Q6NVV7 RPS3P2-201ENST00000421346 701 ntBASIC4.12□□□□□ -1.75
CDPF1Q6NVV7 RPL23AP95-201ENST00000426806 265 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms