Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RNU6-326P-201ENST00000365480 107 ntBASIC5.75□□□□□ -1.49
RC3H1Q5TC82 RNA5SP187-201ENST00000384400 119 ntBASIC5.75□□□□□ -1.49
RC3H1Q5TC82 Y_RNA.504-201ENST00000384481 104 ntBASIC5.75□□□□□ -1.49
RC3H1Q5TC82 Y_RNA.568-201ENST00000384742 113 ntBASIC5.75□□□□□ -1.49
RC3H1Q5TC82 MIR578-201ENST00000384828 96 ntBASIC5.75□□□□□ -1.49
RC3H1Q5TC82 AC007738.1-201ENST00000413892 348 ntBASIC5.75□□□□□ -1.49
RC3H1Q5TC82 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.75□□□□□ -1.49
RC3H1Q5TC82 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.75□□□□□ -1.49
RC3H1Q5TC82 ELOCP18-201ENST00000434209 337 ntBASIC5.75□□□□□ -1.49
RC3H1Q5TC82 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.75□□□□□ -1.49
RC3H1Q5TC82 AC234775.1-201ENST00000454247 670 ntBASIC5.75□□□□□ -1.49
RC3H1Q5TC82 RFPL4AP5-201ENST00000514977 504 ntBASIC5.75□□□□□ -1.49
RC3H1Q5TC82 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.75□□□□□ -1.49
RC3H1Q5TC82 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.75□□□□□ -1.49
RC3H1Q5TC82 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.75□□□□□ -1.49
RC3H1Q5TC82 AC023824.2-201ENST00000566185 400 ntBASIC5.75□□□□□ -1.49
RC3H1Q5TC82 MIR4282-201ENST00000583613 67 ntBASIC5.75□□□□□ -1.49
RC3H1Q5TC82 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.75□□□□□ -1.49
RC3H1Q5TC82 MIR6864-201ENST00000617935 70 ntBASIC5.75□□□□□ -1.49
RC3H1Q5TC82 MIR6891-201ENST00000618788 93 ntBASIC5.75□□□□□ -1.49
RC3H1Q5TC82 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RC3H1Q5TC82 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RC3H1Q5TC82 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
RC3H1Q5TC82 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RC3H1Q5TC82 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
RC3H1Q5TC82 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RC3H1Q5TC82 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
RC3H1Q5TC82 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RC3H1Q5TC82 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RC3H1Q5TC82 MIR383-201ENST00000362257 73 ntBASIC5.74□□□□□ -1.49
RC3H1Q5TC82 Y_RNA.324-201ENST00000365165 102 ntBASIC5.74□□□□□ -1.49
RC3H1Q5TC82 AL359837.1-201ENST00000381357 287 ntBASIC5.74□□□□□ -1.49
RC3H1Q5TC82 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
RC3H1Q5TC82 Y_RNA.580-201ENST00000391004 95 ntBASIC5.74□□□□□ -1.49
RC3H1Q5TC82 Y_RNA.590-201ENST00000410140 107 ntBASIC5.74□□□□□ -1.49
RC3H1Q5TC82 RNU6-651P-201ENST00000411040 105 ntBASIC5.74□□□□□ -1.49
RC3H1Q5TC82 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.74□□□□□ -1.49
RC3H1Q5TC82 AL162725.1-201ENST00000435405 301 ntBASIC5.74□□□□□ -1.49
RC3H1Q5TC82 AC004938.1-201ENST00000438468 308 ntBASIC5.74□□□□□ -1.49
RC3H1Q5TC82 BTF3P6-201ENST00000448054 499 ntBASIC5.74□□□□□ -1.49
RC3H1Q5TC82 RNU6-1219P-201ENST00000516143 112 ntBASIC5.74□□□□□ -1.49
RC3H1Q5TC82 Y_RNA.679-201ENST00000516416 91 ntBASIC5.74□□□□□ -1.49
RC3H1Q5TC82 MIR2355-201ENST00000517199 87 ntBASIC5.74□□□□□ -1.49
RC3H1Q5TC82 IGLVIV-53-201ENST00000520107 367 ntBASIC5.74□□□□□ -1.49
RC3H1Q5TC82 AC025755.1-201ENST00000521306 278 ntBASIC5.74□□□□□ -1.49
RC3H1Q5TC82 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC5.74□□□□□ -1.49
RC3H1Q5TC82 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.74□□□□□ -1.49
RC3H1Q5TC82 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.74□□□□□ -1.49
RC3H1Q5TC82 AL590705.4-201ENST00000532209 134 ntBASIC5.74□□□□□ -1.49
RC3H1Q5TC82 CR383656.7-201ENST00000548164 174 ntBASIC5.74□□□□□ -1.49
RC3H1Q5TC82 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.74□□□□□ -1.49
RC3H1Q5TC82 FAM60BP-201ENST00000578364 658 ntBASIC5.74□□□□□ -1.49
RC3H1Q5TC82 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC5.74□□□□□ -1.49
RC3H1Q5TC82 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.74□□□□□ -1.49
RC3H1Q5TC82 SNX18P1Y-201ENST00000616231 511 ntBASIC5.74□□□□□ -1.49
RC3H1Q5TC82 MIR8059-201ENST00000620427 81 ntBASIC5.74□□□□□ -1.49
RC3H1Q5TC82 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RC3H1Q5TC82 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.74□□□□□ -1.49
RC3H1Q5TC82 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
RC3H1Q5TC82 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RC3H1Q5TC82 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RC3H1Q5TC82 AL136164.3-201ENST00000624429 3978 ntBASIC5.74□□□□□ -1.49
RC3H1Q5TC82 AC083843.2-201ENST00000568248 6253 ntBASIC5.74□□□□□ -1.49
RC3H1Q5TC82 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
RC3H1Q5TC82 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
RC3H1Q5TC82 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RC3H1Q5TC82 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RC3H1Q5TC82 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RC3H1Q5TC82 OR51H2P-202ENST00000641424 3046 ntBASIC5.73□□□□□ -1.49
RC3H1Q5TC82 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.73□□□□□ -1.49
RC3H1Q5TC82 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.73□□□□□ -1.49
RC3H1Q5TC82 SPRR2C-201ENST00000290702 219 ntBASIC5.73□□□□□ -1.49
RC3H1Q5TC82 RNU6-153P-201ENST00000364422 104 ntBASIC5.73□□□□□ -1.49
RC3H1Q5TC82 Y_RNA.435-201ENST00000384095 112 ntBASIC5.73□□□□□ -1.49
RC3H1Q5TC82 MIR23A-201ENST00000385245 73 ntBASIC5.73□□□□□ -1.49
RC3H1Q5TC82 RNU6-817P-201ENST00000391083 104 ntBASIC5.73□□□□□ -1.49
RC3H1Q5TC82 SNORA68.2-201ENST00000391263 128 ntBASIC5.73□□□□□ -1.49
RC3H1Q5TC82 RNU2-61P-201ENST00000411069 191 ntBASIC5.73□□□□□ -1.49
RC3H1Q5TC82 Y_RNA.638-201ENST00000459374 113 ntBASIC5.73□□□□□ -1.49
RC3H1Q5TC82 SNORA67.7-201ENST00000516664 135 ntBASIC5.73□□□□□ -1.49
RC3H1Q5TC82 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.73□□□□□ -1.49
RC3H1Q5TC82 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC5.73□□□□□ -1.49
RC3H1Q5TC82 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC5.73□□□□□ -1.49
RC3H1Q5TC82 MIR4444-1-201ENST00000581696 74 ntBASIC5.73□□□□□ -1.49
RC3H1Q5TC82 MIR4660-201ENST00000583549 74 ntBASIC5.73□□□□□ -1.49
RC3H1Q5TC82 MIR4444-2-201ENST00000584390 74 ntBASIC5.73□□□□□ -1.49
RC3H1Q5TC82 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RC3H1Q5TC82 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RC3H1Q5TC82 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RC3H1Q5TC82 AL121839.2-201ENST00000565058 6943 ntBASIC5.73□□□□□ -1.49
RC3H1Q5TC82 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RC3H1Q5TC82 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RC3H1Q5TC82 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RC3H1Q5TC82 AL450326.2-201ENST00000421913 1962 ntBASIC5.73□□□□□ -1.49
RC3H1Q5TC82 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.72□□□□□ -1.49
RC3H1Q5TC82 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
RC3H1Q5TC82 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
RC3H1Q5TC82 MIR331-201ENST00000362302 94 ntBASIC5.72□□□□□ -1.49
RC3H1Q5TC82 RNA5SP205-201ENST00000364653 136 ntBASIC5.72□□□□□ -1.49
RC3H1Q5TC82 Y_RNA.273-201ENST00000364703 102 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms