Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.38□□□□□ -1.87
NR1H2P55055 U4.5-201ENST00000617137 123 ntBASIC3.38□□□□□ -1.87
NR1H2P55055 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.38□□□□□ -1.87
NR1H2P55055 AC139792.3-201ENST00000623525 224 ntBASIC3.38□□□□□ -1.87
NR1H2P55055 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.38□□□□□ -1.87
NR1H2P55055 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
NR1H2P55055 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.37□□□□□ -1.87
NR1H2P55055 MTND5P17-201ENST00000418405 1603 ntBASIC3.37□□□□□ -1.87
NR1H2P55055 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.37□□□□□ -1.87
NR1H2P55055 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NR1H2P55055 AC099654.7-201ENST00000635788 2127 ntBASIC3.37□□□□□ -1.87
NR1H2P55055 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NR1H2P55055 OR4G2P-201ENST00000328113 903 ntBASIC3.37□□□□□ -1.87
NR1H2P55055 RNA5SP119-201ENST00000362715 117 ntBASIC3.37□□□□□ -1.87
NR1H2P55055 RNU6-1120P-201ENST00000362988 108 ntBASIC3.37□□□□□ -1.87
NR1H2P55055 U8.11-201ENST00000384699 133 ntBASIC3.37□□□□□ -1.87
NR1H2P55055 U8.12-201ENST00000384701 133 ntBASIC3.37□□□□□ -1.87
NR1H2P55055 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
NR1H2P55055 AL590002.1-201ENST00000406554 418 ntBASIC3.37□□□□□ -1.87
NR1H2P55055 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.37□□□□□ -1.87
NR1H2P55055 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
NR1H2P55055 RPL26P27-201ENST00000414397 437 ntBASIC3.37□□□□□ -1.87
NR1H2P55055 SDCBPP3-201ENST00000419629 891 ntBASIC3.37□□□□□ -1.87
NR1H2P55055 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.37□□□□□ -1.87
NR1H2P55055 CALM2P2-201ENST00000428512 440 ntBASIC3.37□□□□□ -1.87
NR1H2P55055 TIMM9P3-201ENST00000428659 274 ntBASIC3.37□□□□□ -1.87
NR1H2P55055 HMGN2P31-201ENST00000432430 273 ntBASIC3.37□□□□□ -1.87
NR1H2P55055 MTATP6P16-201ENST00000434543 526 ntBASIC3.37□□□□□ -1.87
NR1H2P55055 RPS24P13-201ENST00000442520 397 ntBASIC3.37□□□□□ -1.87
NR1H2P55055 FABP5P13-201ENST00000452144 328 ntBASIC3.37□□□□□ -1.87
NR1H2P55055 RPL12P25-201ENST00000455592 494 ntBASIC3.37□□□□□ -1.87
NR1H2P55055 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.37□□□□□ -1.87
NR1H2P55055 U8.18-201ENST00000459285 133 ntBASIC3.37□□□□□ -1.87
NR1H2P55055 AC019235.1-201ENST00000503847 207 ntBASIC3.37□□□□□ -1.87
NR1H2P55055 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.37□□□□□ -1.87
NR1H2P55055 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.37□□□□□ -1.87
NR1H2P55055 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.37□□□□□ -1.87
NR1H2P55055 OR4R1P-201ENST00000529879 463 ntBASIC3.37□□□□□ -1.87
NR1H2P55055 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
NR1H2P55055 ADI1P3-201ENST00000549509 470 ntBASIC3.37□□□□□ -1.87
NR1H2P55055 AC087499.8-201ENST00000578406 226 ntBASIC3.37□□□□□ -1.87
NR1H2P55055 AC022893.3-201ENST00000607665 437 ntBASIC3.37□□□□□ -1.87
NR1H2P55055 AC017083.3-201ENST00000609955 700 ntBASIC3.37□□□□□ -1.87
NR1H2P55055 AC019176.2-201ENST00000611579 315 ntBASIC3.37□□□□□ -1.87
NR1H2P55055 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NR1H2P55055 U6atac.1-201ENST00000616025 117 ntBASIC3.37□□□□□ -1.87
NR1H2P55055 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.37□□□□□ -1.87
NR1H2P55055 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NR1H2P55055 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
NR1H2P55055 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
NR1H2P55055 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NR1H2P55055 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NR1H2P55055 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.36□□□□□ -1.87
NR1H2P55055 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
NR1H2P55055 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.36□□□□□ -1.87
NR1H2P55055 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
NR1H2P55055 RNU6-179P-201ENST00000363350 107 ntBASIC3.36□□□□□ -1.87
NR1H2P55055 SNORD56.3-201ENST00000363507 71 ntBASIC3.36□□□□□ -1.87
NR1H2P55055 RNU6-884P-201ENST00000363889 107 ntBASIC3.36□□□□□ -1.87
NR1H2P55055 Y_RNA.367-201ENST00000365544 101 ntBASIC3.36□□□□□ -1.87
NR1H2P55055 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NR1H2P55055 CD24P4-201ENST00000382840 243 ntBASIC3.36□□□□□ -1.87
NR1H2P55055 SNORA5A-201ENST00000384111 134 ntBASIC3.36□□□□□ -1.87
NR1H2P55055 MIR491-201ENST00000384877 84 ntBASIC3.36□□□□□ -1.87
NR1H2P55055 MIR483-201ENST00000385070 76 ntBASIC3.36□□□□□ -1.87
NR1H2P55055 RNU6-780P-201ENST00000391030 104 ntBASIC3.36□□□□□ -1.87
NR1H2P55055 RNA5SP354-201ENST00000391247 136 ntBASIC3.36□□□□□ -1.87
NR1H2P55055 AC068050.1-201ENST00000394891 380 ntBASIC3.36□□□□□ -1.87
NR1H2P55055 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.36□□□□□ -1.87
NR1H2P55055 AC114491.1-201ENST00000416095 246 ntBASIC3.36□□□□□ -1.87
NR1H2P55055 EIF1P1-201ENST00000421436 341 ntBASIC3.36□□□□□ -1.87
NR1H2P55055 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.36□□□□□ -1.87
NR1H2P55055 AC009969.1-201ENST00000438726 172 ntBASIC3.36□□□□□ -1.87
NR1H2P55055 RPS3AP12-201ENST00000443616 753 ntBASIC3.36□□□□□ -1.87
NR1H2P55055 RPL23AP20-201ENST00000447965 421 ntBASIC3.36□□□□□ -1.87
NR1H2P55055 DPPA3P1-201ENST00000448050 469 ntBASIC3.36□□□□□ -1.87
NR1H2P55055 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NR1H2P55055 AC128713.1-201ENST00000471495 306 ntBASIC3.36□□□□□ -1.87
NR1H2P55055 HSPD1P15-201ENST00000505573 1122 ntBASIC3.36□□□□□ -1.87
NR1H2P55055 AC116562.3-201ENST00000506136 177 ntBASIC3.36□□□□□ -1.87
NR1H2P55055 AC026403.1-201ENST00000518938 295 ntBASIC3.36□□□□□ -1.87
NR1H2P55055 SUB1P1-201ENST00000524415 382 ntBASIC3.36□□□□□ -1.87
NR1H2P55055 AC068587.5-201ENST00000528506 175 ntBASIC3.36□□□□□ -1.87
NR1H2P55055 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.36□□□□□ -1.87
NR1H2P55055 AP003034.1-201ENST00000534621 422 ntBASIC3.36□□□□□ -1.87
NR1H2P55055 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.36□□□□□ -1.87
NR1H2P55055 AL359212.1-201ENST00000556608 614 ntBASIC3.36□□□□□ -1.87
NR1H2P55055 AL391261.3-201ENST00000557194 520 ntBASIC3.36□□□□□ -1.87
NR1H2P55055 AC027807.1-201ENST00000559921 996 ntBASIC3.36□□□□□ -1.87
NR1H2P55055 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.36□□□□□ -1.87
NR1H2P55055 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.36□□□□□ -1.87
NR1H2P55055 MIR3200-201ENST00000580767 85 ntBASIC3.36□□□□□ -1.87
NR1H2P55055 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.36□□□□□ -1.87
NR1H2P55055 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.36□□□□□ -1.87
NR1H2P55055 AC008536.2-201ENST00000607284 349 ntBASIC3.36□□□□□ -1.87
NR1H2P55055 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.36□□□□□ -1.87
NR1H2P55055 AL160394.1-201ENST00000624765 724 ntBASIC3.36□□□□□ -1.87
NR1H2P55055 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.36□□□□□ -1.87
NR1H2P55055 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NR1H2P55055 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms