Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AL022322.2-201ENST00000624072 20397 ntBASIC4.92□□□□□ -1.62
RNF144AP50876 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RNF144AP50876 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
RNF144AP50876 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
RNF144AP50876 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RNF144AP50876 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RNF144AP50876 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.91□□□□□ -1.62
RNF144AP50876 AL450326.2-201ENST00000421913 1962 ntBASIC4.91□□□□□ -1.62
RNF144AP50876 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RNF144AP50876 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.91□□□□□ -1.62
RNF144AP50876 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RNF144AP50876 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RNF144AP50876 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
RNF144AP50876 Y_RNA.7-201ENST00000362352 102 ntBASIC4.91□□□□□ -1.62
RNF144AP50876 RNU4-84P-201ENST00000364200 139 ntBASIC4.91□□□□□ -1.62
RNF144AP50876 RNU6-153P-201ENST00000364422 104 ntBASIC4.91□□□□□ -1.62
RNF144AP50876 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.91□□□□□ -1.62
RNF144AP50876 RNU6-211P-201ENST00000384047 107 ntBASIC4.91□□□□□ -1.62
RNF144AP50876 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RNF144AP50876 RNU4-34P-201ENST00000410431 124 ntBASIC4.91□□□□□ -1.62
RNF144AP50876 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.91□□□□□ -1.62
RNF144AP50876 RPL19P16-201ENST00000433839 588 ntBASIC4.91□□□□□ -1.62
RNF144AP50876 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.91□□□□□ -1.62
RNF144AP50876 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.91□□□□□ -1.62
RNF144AP50876 RPL12P46-201ENST00000436610 195 ntBASIC4.91□□□□□ -1.62
RNF144AP50876 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.91□□□□□ -1.62
RNF144AP50876 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.91□□□□□ -1.62
RNF144AP50876 IFNA11P-201ENST00000446352 526 ntBASIC4.91□□□□□ -1.62
RNF144AP50876 AC092798.1-201ENST00000458542 409 ntBASIC4.91□□□□□ -1.62
RNF144AP50876 RPL23AP49-201ENST00000492925 468 ntBASIC4.91□□□□□ -1.62
RNF144AP50876 AC139453.3-201ENST00000493276 369 ntBASIC4.91□□□□□ -1.62
RNF144AP50876 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
RNF144AP50876 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.91□□□□□ -1.62
RNF144AP50876 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.91□□□□□ -1.62
RNF144AP50876 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.91□□□□□ -1.62
RNF144AP50876 RNU6-572P-201ENST00000516724 80 ntBASIC4.91□□□□□ -1.62
RNF144AP50876 RNA5SP290-201ENST00000517133 127 ntBASIC4.91□□□□□ -1.62
RNF144AP50876 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.91□□□□□ -1.62
RNF144AP50876 TGIF1P1-201ENST00000558095 802 ntBASIC4.91□□□□□ -1.62
RNF144AP50876 AL390726.5-202ENST00000564800 256 ntBASIC4.91□□□□□ -1.62
RNF144AP50876 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.91□□□□□ -1.62
RNF144AP50876 snoU18.1-201ENST00000629629 71 ntBASIC4.91□□□□□ -1.62
RNF144AP50876 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RNF144AP50876 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.91□□□□□ -1.62
RNF144AP50876 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RNF144AP50876 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
RNF144AP50876 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.91□□□□□ -1.62
RNF144AP50876 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RNF144AP50876 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
RNF144AP50876 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RNF144AP50876 ZNF204P-201ENST00000416749 2397 ntBASIC4.91□□□□□ -1.62
RNF144AP50876 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RNF144AP50876 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
RNF144AP50876 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RNF144AP50876 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
RNF144AP50876 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RNF144AP50876 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
RNF144AP50876 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.9□□□□□ -1.62
RNF144AP50876 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.9□□□□□ -1.62
RNF144AP50876 Z95331.1-201ENST00000623075 23112 ntBASIC4.9□□□□□ -1.62
RNF144AP50876 RNU6-527P-201ENST00000363425 104 ntBASIC4.9□□□□□ -1.63
RNF144AP50876 RNU6-818P-201ENST00000364837 108 ntBASIC4.9□□□□□ -1.63
RNF144AP50876 MIR569-201ENST00000385228 96 ntBASIC4.9□□□□□ -1.63
RNF144AP50876 RN7SKP206-201ENST00000410823 293 ntBASIC4.9□□□□□ -1.63
RNF144AP50876 RN7SKP293-201ENST00000411389 296 ntBASIC4.9□□□□□ -1.63
RNF144AP50876 SEPT7P4-201ENST00000437076 306 ntBASIC4.9□□□□□ -1.63
RNF144AP50876 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.9□□□□□ -1.63
RNF144AP50876 AL078601.1-201ENST00000444542 271 ntBASIC4.9□□□□□ -1.63
RNF144AP50876 PPIAP20-201ENST00000449839 135 ntBASIC4.9□□□□□ -1.63
RNF144AP50876 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.9□□□□□ -1.63
RNF144AP50876 AC005840.1-201ENST00000498412 377 ntBASIC4.9□□□□□ -1.63
RNF144AP50876 BTF3L4P4-201ENST00000506381 449 ntBASIC4.9□□□□□ -1.63
RNF144AP50876 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.9□□□□□ -1.63
RNF144AP50876 AC024940.3-201ENST00000538551 316 ntBASIC4.9□□□□□ -1.63
RNF144AP50876 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.9□□□□□ -1.63
RNF144AP50876 MIR4782-201ENST00000577987 79 ntBASIC4.9□□□□□ -1.63
RNF144AP50876 FKBP1AP1-201ENST00000594588 318 ntBASIC4.9□□□□□ -1.63
RNF144AP50876 AC005176.2-201ENST00000596933 147 ntBASIC4.9□□□□□ -1.63
RNF144AP50876 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.9□□□□□ -1.63
RNF144AP50876 AC068831.7-201ENST00000616954 363 ntBASIC4.9□□□□□ -1.63
RNF144AP50876 AL049767.1-202ENST00000637826 242 ntBASIC4.9□□□□□ -1.63
RNF144AP50876 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RNF144AP50876 AC022893.2-201ENST00000564832 3296 ntBASIC4.9□□□□□ -1.63
RNF144AP50876 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RNF144AP50876 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RNF144AP50876 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RNF144AP50876 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RNF144AP50876 AL353743.1-202ENST00000431724 1695 ntBASIC4.89□□□□□ -1.63
RNF144AP50876 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RNF144AP50876 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF144AP50876 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RNF144AP50876 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
RNF144AP50876 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.89□□□□□ -1.63
RNF144AP50876 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF144AP50876 Y_RNA.23-201ENST00000362496 106 ntBASIC4.89□□□□□ -1.63
RNF144AP50876 RNU6-105P-201ENST00000363909 104 ntBASIC4.89□□□□□ -1.63
RNF144AP50876 RNU6-173P-201ENST00000364215 104 ntBASIC4.89□□□□□ -1.63
RNF144AP50876 Y_RNA.238-201ENST00000364441 102 ntBASIC4.89□□□□□ -1.63
RNF144AP50876 RNU6-281P-201ENST00000384212 103 ntBASIC4.89□□□□□ -1.63
RNF144AP50876 SNORA40-201ENST00000388090 126 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms