Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.09□□□□□ -2.07
CXCL12P48061 AC087465.1-201ENST00000560574 245 ntBASIC2.09□□□□□ -2.07
CXCL12P48061 ACTR3BP3-201ENST00000565577 979 ntBASIC2.09□□□□□ -2.07
CXCL12P48061 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.09□□□□□ -2.07
CXCL12P48061 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.09□□□□□ -2.07
CXCL12P48061 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.09□□□□□ -2.07
CXCL12P48061 AC107952.2-201ENST00000606048 486 ntBASIC2.09□□□□□ -2.07
CXCL12P48061 AL159972.1-201ENST00000625150 448 ntBASIC2.09□□□□□ -2.07
CXCL12P48061 AC019226.1-201ENST00000625666 515 ntBASIC2.09□□□□□ -2.07
CXCL12P48061 AC093591.3-201ENST00000634516 308 ntBASIC2.09□□□□□ -2.07
CXCL12P48061 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
CXCL12P48061 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
CXCL12P48061 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CXCL12P48061 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.08□□□□□ -2.08
CXCL12P48061 AC080100.1-201ENST00000624239 5356 ntBASIC2.08□□□□□ -2.08
CXCL12P48061 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CXCL12P48061 RNU6-433P-201ENST00000363216 104 ntBASIC2.08□□□□□ -2.08
CXCL12P48061 RNU6-723P-201ENST00000383973 107 ntBASIC2.08□□□□□ -2.08
CXCL12P48061 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
CXCL12P48061 U3.20-201ENST00000390909 217 ntBASIC2.08□□□□□ -2.08
CXCL12P48061 ANAPC10P1-201ENST00000395991 556 ntBASIC2.08□□□□□ -2.08
CXCL12P48061 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.08□□□□□ -2.08
CXCL12P48061 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.08□□□□□ -2.08
CXCL12P48061 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.08□□□□□ -2.08
CXCL12P48061 RPL7L1P10-201ENST00000427790 463 ntBASIC2.08□□□□□ -2.08
CXCL12P48061 AL356867.1-201ENST00000429623 299 ntBASIC2.08□□□□□ -2.08
CXCL12P48061 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.08□□□□□ -2.08
CXCL12P48061 UBE2V1P13-201ENST00000436983 439 ntBASIC2.08□□□□□ -2.08
CXCL12P48061 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.08□□□□□ -2.08
CXCL12P48061 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.08□□□□□ -2.08
CXCL12P48061 RPL23AP35-201ENST00000451906 501 ntBASIC2.08□□□□□ -2.08
CXCL12P48061 ATG12P2-201ENST00000456830 416 ntBASIC2.08□□□□□ -2.08
CXCL12P48061 SETP11-201ENST00000473027 690 ntBASIC2.08□□□□□ -2.08
CXCL12P48061 LARP1BP2-201ENST00000486594 519 ntBASIC2.08□□□□□ -2.08
CXCL12P48061 AC135721.1-201ENST00000497954 479 ntBASIC2.08□□□□□ -2.08
CXCL12P48061 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.08□□□□□ -2.08
CXCL12P48061 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.08□□□□□ -2.08
CXCL12P48061 AC093809.1-201ENST00000509155 340 ntBASIC2.08□□□□□ -2.08
CXCL12P48061 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
CXCL12P48061 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CXCL12P48061 SCARNA17.1-201ENST00000516211 143 ntBASIC2.08□□□□□ -2.08
CXCL12P48061 SCARNA17.2-201ENST00000516334 143 ntBASIC2.08□□□□□ -2.08
CXCL12P48061 RNU5A-4P-201ENST00000516588 111 ntBASIC2.08□□□□□ -2.08
CXCL12P48061 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.08□□□□□ -2.08
CXCL12P48061 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.08□□□□□ -2.08
CXCL12P48061 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.08□□□□□ -2.08
CXCL12P48061 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.08□□□□□ -2.08
CXCL12P48061 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.08□□□□□ -2.08
CXCL12P48061 AC124947.2-202ENST00000552735 133 ntBASIC2.08□□□□□ -2.08
CXCL12P48061 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.08□□□□□ -2.08
CXCL12P48061 AC060771.1-201ENST00000582031 164 ntBASIC2.08□□□□□ -2.08
CXCL12P48061 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.08□□□□□ -2.08
CXCL12P48061 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.08□□□□□ -2.08
CXCL12P48061 AL391001.1-201ENST00000602747 715 ntBASIC2.08□□□□□ -2.08
CXCL12P48061 U73023.1-201ENST00000603134 700 ntBASIC2.08□□□□□ -2.08
CXCL12P48061 AL357094.1-201ENST00000603845 844 ntBASIC2.08□□□□□ -2.08
CXCL12P48061 AL139344.1-201ENST00000605228 195 ntBASIC2.08□□□□□ -2.08
CXCL12P48061 RNU6-88P-201ENST00000606801 100 ntBASIC2.08□□□□□ -2.08
CXCL12P48061 AC097468.3-201ENST00000607956 456 ntBASIC2.08□□□□□ -2.08
CXCL12P48061 Y_RNA.783-201ENST00000613546 102 ntBASIC2.08□□□□□ -2.08
CXCL12P48061 SCARNA17.4-201ENST00000614296 143 ntBASIC2.08□□□□□ -2.08
CXCL12P48061 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.08□□□□□ -2.08
CXCL12P48061 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
CXCL12P48061 AC009268.2-201ENST00000621925 457 ntBASIC2.08□□□□□ -2.08
CXCL12P48061 OR5H6-203ENST00000642105 978 ntBASIC2.08□□□□□ -2.08
CXCL12P48061 TPTE2P4-201ENST00000258589 1605 ntBASIC2.08□□□□□ -2.08
CXCL12P48061 ZNF519P1-201ENST00000449011 1626 ntBASIC2.08□□□□□ -2.08
CXCL12P48061 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CXCL12P48061 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
CXCL12P48061 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
CXCL12P48061 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
CXCL12P48061 RNU6-931P-201ENST00000363850 107 ntBASIC2.07□□□□□ -2.08
CXCL12P48061 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.07□□□□□ -2.08
CXCL12P48061 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.07□□□□□ -2.08
CXCL12P48061 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.07□□□□□ -2.08
CXCL12P48061 AC005005.2-201ENST00000420779 380 ntBASIC2.07□□□□□ -2.08
CXCL12P48061 AC108667.1-201ENST00000428618 249 ntBASIC2.07□□□□□ -2.08
CXCL12P48061 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.07□□□□□ -2.08
CXCL12P48061 AL512844.2-201ENST00000433990 593 ntBASIC2.07□□□□□ -2.08
CXCL12P48061 AL591719.1-201ENST00000444669 744 ntBASIC2.07□□□□□ -2.08
CXCL12P48061 TPT1P14-201ENST00000448018 505 ntBASIC2.07□□□□□ -2.08
CXCL12P48061 AL118520.1-201ENST00000450770 291 ntBASIC2.07□□□□□ -2.08
CXCL12P48061 MTND1P9-201ENST00000453775 944 ntBASIC2.07□□□□□ -2.08
CXCL12P48061 snoU13.28-201ENST00000459235 104 ntBASIC2.07□□□□□ -2.08
CXCL12P48061 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.07□□□□□ -2.08
CXCL12P48061 RNA5SP216-201ENST00000516111 123 ntBASIC2.07□□□□□ -2.08
CXCL12P48061 RNU6-840P-201ENST00000517275 65 ntBASIC2.07□□□□□ -2.08
CXCL12P48061 RNU1-104P-201ENST00000517280 175 ntBASIC2.07□□□□□ -2.08
CXCL12P48061 AC023538.1-201ENST00000534576 736 ntBASIC2.07□□□□□ -2.08
CXCL12P48061 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.07□□□□□ -2.08
CXCL12P48061 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.07□□□□□ -2.08
CXCL12P48061 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.07□□□□□ -2.08
CXCL12P48061 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.07□□□□□ -2.08
CXCL12P48061 AL645944.1-201ENST00000603857 493 ntBASIC2.07□□□□□ -2.08
CXCL12P48061 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.07□□□□□ -2.08
CXCL12P48061 AC103710.4-201ENST00000609301 899 ntBASIC2.07□□□□□ -2.08
CXCL12P48061 TUG1_2.1-201ENST00000614234 87 ntBASIC2.07□□□□□ -2.08
CXCL12P48061 AL607023.1-201ENST00000620045 248 ntBASIC2.07□□□□□ -2.08
CXCL12P48061 AL138713.1-201ENST00000624026 2130 ntBASIC2.07□□□□□ -2.08
CXCL12P48061 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms