Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 RNU6-1020P-201ENST00000363684 107 ntBASIC5.76□□□□□ -1.49
CLCN1P35523 RNU6-879P-201ENST00000364328 108 ntBASIC5.76□□□□□ -1.49
CLCN1P35523 GSTM5P1-201ENST00000434751 660 ntBASIC5.76□□□□□ -1.49
CLCN1P35523 AC098831.1-201ENST00000440661 216 ntBASIC5.76□□□□□ -1.49
CLCN1P35523 AL353705.4-201ENST00000449661 238 ntBASIC5.76□□□□□ -1.49
CLCN1P35523 AC109925.1-201ENST00000478069 331 ntBASIC5.76□□□□□ -1.49
CLCN1P35523 AC074198.2-201ENST00000508153 258 ntBASIC5.76□□□□□ -1.49
CLCN1P35523 RN7SL356P-201ENST00000582228 248 ntBASIC5.76□□□□□ -1.49
CLCN1P35523 SCARNA4-202ENST00000625402 129 ntBASIC5.76□□□□□ -1.49
CLCN1P35523 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.76□□□□□ -1.49
CLCN1P35523 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.75□□□□□ -1.49
CLCN1P35523 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CLCN1P35523 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CLCN1P35523 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
CLCN1P35523 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CLCN1P35523 RNU1-108P-201ENST00000362556 161 ntBASIC5.75□□□□□ -1.49
CLCN1P35523 RN7SKP124-201ENST00000364730 341 ntBASIC5.75□□□□□ -1.49
CLCN1P35523 RNU6-741P-201ENST00000383889 107 ntBASIC5.75□□□□□ -1.49
CLCN1P35523 SNORA66-201ENST00000384792 133 ntBASIC5.75□□□□□ -1.49
CLCN1P35523 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CLCN1P35523 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.75□□□□□ -1.49
CLCN1P35523 AC016700.2-201ENST00000446011 156 ntBASIC5.75□□□□□ -1.49
CLCN1P35523 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.75□□□□□ -1.49
CLCN1P35523 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.75□□□□□ -1.49
CLCN1P35523 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.75□□□□□ -1.49
CLCN1P35523 RNU2-31P-201ENST00000516954 155 ntBASIC5.75□□□□□ -1.49
CLCN1P35523 SCARNA16.4-201ENST00000516956 187 ntBASIC5.75□□□□□ -1.49
CLCN1P35523 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.75□□□□□ -1.49
CLCN1P35523 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.75□□□□□ -1.49
CLCN1P35523 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC5.75□□□□□ -1.49
CLCN1P35523 AL162424.1-201ENST00000602325 221 ntBASIC5.75□□□□□ -1.49
CLCN1P35523 SNORD113-5-201ENST00000607261 78 ntBASIC5.75□□□□□ -1.49
CLCN1P35523 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.75□□□□□ -1.49
CLCN1P35523 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.75□□□□□ -1.49
CLCN1P35523 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLCN1P35523 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLCN1P35523 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC5.75□□□□□ -1.49
CLCN1P35523 SCN1A-220ENST00000641603 12506 ntBASIC5.75□□□□□ -1.49
CLCN1P35523 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
CLCN1P35523 AL359693.1-201ENST00000614959 2407 ntBASIC5.75□□□□□ -1.49
CLCN1P35523 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
CLCN1P35523 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.75□□□□□ -1.49
CLCN1P35523 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLCN1P35523 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.74□□□□□ -1.49
CLCN1P35523 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.74□□□□□ -1.49
CLCN1P35523 Y_RNA.122-201ENST00000363331 96 ntBASIC5.74□□□□□ -1.49
CLCN1P35523 RNA5SP132-201ENST00000364725 118 ntBASIC5.74□□□□□ -1.49
CLCN1P35523 RNA5SP223-201ENST00000365174 120 ntBASIC5.74□□□□□ -1.49
CLCN1P35523 RNU6-326P-201ENST00000365480 107 ntBASIC5.74□□□□□ -1.49
CLCN1P35523 RNU6-17P-201ENST00000384245 107 ntBASIC5.74□□□□□ -1.49
CLCN1P35523 RNU6-72P-201ENST00000384285 79 ntBASIC5.74□□□□□ -1.49
CLCN1P35523 Y_RNA.504-201ENST00000384481 104 ntBASIC5.74□□□□□ -1.49
CLCN1P35523 RNU6-18P-201ENST00000384527 107 ntBASIC5.74□□□□□ -1.49
CLCN1P35523 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.74□□□□□ -1.49
CLCN1P35523 RPS12P23-201ENST00000419579 400 ntBASIC5.74□□□□□ -1.49
CLCN1P35523 AC098614.2-201ENST00000426040 255 ntBASIC5.74□□□□□ -1.49
CLCN1P35523 AP000907.1-201ENST00000428428 510 ntBASIC5.74□□□□□ -1.49
CLCN1P35523 AC005002.2-201ENST00000438228 269 ntBASIC5.74□□□□□ -1.49
CLCN1P35523 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.74□□□□□ -1.49
CLCN1P35523 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC5.74□□□□□ -1.49
CLCN1P35523 COX6CP14-201ENST00000469580 174 ntBASIC5.74□□□□□ -1.49
CLCN1P35523 RPL23AP75-201ENST00000491601 451 ntBASIC5.74□□□□□ -1.49
CLCN1P35523 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.74□□□□□ -1.49
CLCN1P35523 AC090132.2-201ENST00000615881 347 ntBASIC5.74□□□□□ -1.49
CLCN1P35523 MIR6826-201ENST00000617808 98 ntBASIC5.74□□□□□ -1.49
CLCN1P35523 U6.99-201ENST00000637524 83 ntBASIC5.74□□□□□ -1.49
CLCN1P35523 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLCN1P35523 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.74□□□□□ -1.49
CLCN1P35523 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLCN1P35523 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLCN1P35523 AC092435.4-201ENST00000623012 4159 ntBASIC5.73□□□□□ -1.49
CLCN1P35523 SCARNA15-201ENST00000607520 4325 ntBASIC5.73□□□□□ -1.49
CLCN1P35523 MIR133B-201ENST00000362210 119 ntBASIC5.73□□□□□ -1.49
CLCN1P35523 RNU6-527P-201ENST00000363425 104 ntBASIC5.73□□□□□ -1.49
CLCN1P35523 RNU6-740P-201ENST00000364734 105 ntBASIC5.73□□□□□ -1.49
CLCN1P35523 RNY4P28-201ENST00000365281 93 ntBASIC5.73□□□□□ -1.49
CLCN1P35523 UBA52P6-201ENST00000399822 382 ntBASIC5.73□□□□□ -1.49
CLCN1P35523 HSPA8P15-201ENST00000401676 786 ntBASIC5.73□□□□□ -1.49
CLCN1P35523 AL035079.1-201ENST00000405210 287 ntBASIC5.73□□□□□ -1.49
CLCN1P35523 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC5.73□□□□□ -1.49
CLCN1P35523 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.73□□□□□ -1.49
CLCN1P35523 AL139148.1-201ENST00000427122 680 ntBASIC5.73□□□□□ -1.49
CLCN1P35523 AL590383.1-201ENST00000428602 75 ntBASIC5.73□□□□□ -1.49
CLCN1P35523 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC5.73□□□□□ -1.49
CLCN1P35523 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.73□□□□□ -1.49
CLCN1P35523 RPS15AP7-201ENST00000439294 405 ntBASIC5.73□□□□□ -1.49
CLCN1P35523 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.73□□□□□ -1.49
CLCN1P35523 RN7SL517P-201ENST00000462240 305 ntBASIC5.73□□□□□ -1.49
CLCN1P35523 AC022404.1-201ENST00000555320 273 ntBASIC5.73□□□□□ -1.49
CLCN1P35523 MIR548AI-201ENST00000579940 88 ntBASIC5.73□□□□□ -1.49
CLCN1P35523 AC053481.4-201ENST00000583164 216 ntBASIC5.73□□□□□ -1.49
CLCN1P35523 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.73□□□□□ -1.49
CLCN1P35523 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.73□□□□□ -1.49
CLCN1P35523 AC072026.1-201ENST00000605023 201 ntBASIC5.73□□□□□ -1.49
CLCN1P35523 MIR6798-201ENST00000612887 67 ntBASIC5.73□□□□□ -1.49
CLCN1P35523 AL691477.1-201ENST00000624398 162 ntBASIC5.73□□□□□ -1.49
CLCN1P35523 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.73□□□□□ -1.49
CLCN1P35523 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLCN1P35523 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLCN1P35523 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms