Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 RNU6-567P-201ENST00000516746 107 ntBASIC4.96□□□□□ -1.62
GPC1P35052 SNORD84-203ENST00000584275 78 ntBASIC4.96□□□□□ -1.62
GPC1P35052 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.96□□□□□ -1.62
GPC1P35052 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.96□□□□□ -1.62
GPC1P35052 AC005296.1-201ENST00000616145 209 ntBASIC4.96□□□□□ -1.62
GPC1P35052 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.96□□□□□ -1.62
GPC1P35052 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.96□□□□□ -1.62
GPC1P35052 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
GPC1P35052 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.96□□□□□ -1.62
GPC1P35052 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
GPC1P35052 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
GPC1P35052 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.96□□□□□ -1.62
GPC1P35052 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
GPC1P35052 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
GPC1P35052 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.96□□□□□ -1.62
GPC1P35052 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
GPC1P35052 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.95□□□□□ -1.62
GPC1P35052 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
GPC1P35052 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
GPC1P35052 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.95□□□□□ -1.62
GPC1P35052 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.95□□□□□ -1.62
GPC1P35052 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.95□□□□□ -1.62
GPC1P35052 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
GPC1P35052 Y_RNA.215-201ENST00000364204 112 ntBASIC4.95□□□□□ -1.62
GPC1P35052 RNU4-56P-201ENST00000364700 142 ntBASIC4.95□□□□□ -1.62
GPC1P35052 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
GPC1P35052 RNU6-44P-201ENST00000384045 107 ntBASIC4.95□□□□□ -1.62
GPC1P35052 RNU1-139P-201ENST00000391307 165 ntBASIC4.95□□□□□ -1.62
GPC1P35052 AL357139.1-201ENST00000407792 426 ntBASIC4.95□□□□□ -1.62
GPC1P35052 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.95□□□□□ -1.62
GPC1P35052 AC008267.6-201ENST00000441664 139 ntBASIC4.95□□□□□ -1.62
GPC1P35052 AC124916.1-201ENST00000444020 547 ntBASIC4.95□□□□□ -1.62
GPC1P35052 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.95□□□□□ -1.62
GPC1P35052 RN7SL174P-201ENST00000475578 289 ntBASIC4.95□□□□□ -1.62
GPC1P35052 AC139453.3-201ENST00000493276 369 ntBASIC4.95□□□□□ -1.62
GPC1P35052 RNA5SP272-201ENST00000516095 111 ntBASIC4.95□□□□□ -1.62
GPC1P35052 RNU6-426P-201ENST00000516464 97 ntBASIC4.95□□□□□ -1.62
GPC1P35052 RNU6-572P-201ENST00000516724 80 ntBASIC4.95□□□□□ -1.62
GPC1P35052 RNA5SP290-201ENST00000517133 127 ntBASIC4.95□□□□□ -1.62
GPC1P35052 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.95□□□□□ -1.62
GPC1P35052 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.95□□□□□ -1.62
GPC1P35052 AC027369.5-201ENST00000533838 755 ntBASIC4.95□□□□□ -1.62
GPC1P35052 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.95□□□□□ -1.62
GPC1P35052 RPL10P14-201ENST00000565265 298 ntBASIC4.95□□□□□ -1.62
GPC1P35052 MIR4472-2-201ENST00000582069 67 ntBASIC4.95□□□□□ -1.62
GPC1P35052 KLKP1-201ENST00000595979 403 ntBASIC4.95□□□□□ -1.62
GPC1P35052 AL589674.2-201ENST00000604304 337 ntBASIC4.95□□□□□ -1.62
GPC1P35052 AL162431.4-201ENST00000604674 411 ntBASIC4.95□□□□□ -1.62
GPC1P35052 MIR4302-201ENST00000638058 60 ntBASIC4.95□□□□□ -1.62
GPC1P35052 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
GPC1P35052 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
GPC1P35052 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
GPC1P35052 ASNSP1-201ENST00000518311 1939 ntBASIC4.95□□□□□ -1.62
GPC1P35052 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
GPC1P35052 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
GPC1P35052 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
GPC1P35052 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
GPC1P35052 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
GPC1P35052 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
GPC1P35052 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
GPC1P35052 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
GPC1P35052 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
GPC1P35052 RNU6-78P-201ENST00000362897 107 ntBASIC4.94□□□□□ -1.62
GPC1P35052 SNORA51.1-201ENST00000363243 140 ntBASIC4.94□□□□□ -1.62
GPC1P35052 RNU6-166P-201ENST00000384371 107 ntBASIC4.94□□□□□ -1.62
GPC1P35052 MIR153-2-201ENST00000385225 87 ntBASIC4.94□□□□□ -1.62
GPC1P35052 RNU4-34P-201ENST00000410431 124 ntBASIC4.94□□□□□ -1.62
GPC1P35052 AL390729.2-201ENST00000416137 156 ntBASIC4.94□□□□□ -1.62
GPC1P35052 TBCAP2-201ENST00000416175 326 ntBASIC4.94□□□□□ -1.62
GPC1P35052 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.94□□□□□ -1.62
GPC1P35052 RPL26P26-201ENST00000480251 434 ntBASIC4.94□□□□□ -1.62
GPC1P35052 RN7SL814P-201ENST00000487715 300 ntBASIC4.94□□□□□ -1.62
GPC1P35052 HMGB3P3-201ENST00000510526 400 ntBASIC4.94□□□□□ -1.62
GPC1P35052 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.94□□□□□ -1.62
GPC1P35052 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.94□□□□□ -1.62
GPC1P35052 MIR5695-201ENST00000579717 85 ntBASIC4.94□□□□□ -1.62
GPC1P35052 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.94□□□□□ -1.62
GPC1P35052 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.94□□□□□ -1.62
GPC1P35052 FKBP1AP1-201ENST00000594588 318 ntBASIC4.94□□□□□ -1.62
GPC1P35052 AC011445.2-201ENST00000599274 173 ntBASIC4.94□□□□□ -1.62
GPC1P35052 AC018445.2-201ENST00000622987 260 ntBASIC4.94□□□□□ -1.62
GPC1P35052 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.94□□□□□ -1.62
GPC1P35052 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
GPC1P35052 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
GPC1P35052 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
GPC1P35052 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
GPC1P35052 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
GPC1P35052 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
GPC1P35052 AC063976.2-201ENST00000425667 3556 ntBASIC4.94□□□□□ -1.62
GPC1P35052 AC093535.2-201ENST00000624769 2326 ntBASIC4.94□□□□□ -1.62
GPC1P35052 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
GPC1P35052 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
GPC1P35052 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
GPC1P35052 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
GPC1P35052 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.93□□□□□ -1.62
GPC1P35052 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
GPC1P35052 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
GPC1P35052 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
GPC1P35052 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
GPC1P35052 Y_RNA.136-201ENST00000363444 102 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms