Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.97□□□□□ -2.09
CASQ1P31415 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC1.97□□□□□ -2.09
CASQ1P31415 AC126118.1-201ENST00000607744 628 ntBASIC1.97□□□□□ -2.09
CASQ1P31415 AC103710.1-201ENST00000610003 901 ntBASIC1.97□□□□□ -2.09
CASQ1P31415 AC253576.2-201ENST00000618815 580 ntBASIC1.97□□□□□ -2.09
CASQ1P31415 YWHAEP7-203ENST00000622054 312 ntBASIC1.97□□□□□ -2.09
CASQ1P31415 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.97□□□□□ -2.09
CASQ1P31415 AC243829.7-201ENST00000633081 225 ntBASIC1.97□□□□□ -2.09
CASQ1P31415 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CASQ1P31415 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CASQ1P31415 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.97□□□□□ -2.09
CASQ1P31415 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.96□□□□□ -2.1
CASQ1P31415 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
CASQ1P31415 SNORD48-201ENST00000364953 64 ntBASIC1.96□□□□□ -2.1
CASQ1P31415 SNORA67.3-201ENST00000384366 140 ntBASIC1.96□□□□□ -2.1
CASQ1P31415 RNU6-754P-201ENST00000391166 107 ntBASIC1.96□□□□□ -2.1
CASQ1P31415 BTF3L4P3-201ENST00000418879 476 ntBASIC1.96□□□□□ -2.1
CASQ1P31415 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CASQ1P31415 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.96□□□□□ -2.1
CASQ1P31415 RPL7P34-201ENST00000433316 712 ntBASIC1.96□□□□□ -2.1
CASQ1P31415 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.96□□□□□ -2.1
CASQ1P31415 MTND2P29-201ENST00000438595 412 ntBASIC1.96□□□□□ -2.1
CASQ1P31415 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.96□□□□□ -2.1
CASQ1P31415 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.96□□□□□ -2.1
CASQ1P31415 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.96□□□□□ -2.1
CASQ1P31415 RNU6-927P-201ENST00000516199 100 ntBASIC1.96□□□□□ -2.1
CASQ1P31415 SNORA48.11-201ENST00000517015 89 ntBASIC1.96□□□□□ -2.1
CASQ1P31415 snoZ278.1-201ENST00000517059 112 ntBASIC1.96□□□□□ -2.1
CASQ1P31415 AC034114.1-201ENST00000520293 285 ntBASIC1.96□□□□□ -2.1
CASQ1P31415 AC022784.5-201ENST00000522241 437 ntBASIC1.96□□□□□ -2.1
CASQ1P31415 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.96□□□□□ -2.1
CASQ1P31415 DUXAP5-201ENST00000529668 529 ntBASIC1.96□□□□□ -2.1
CASQ1P31415 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.96□□□□□ -2.1
CASQ1P31415 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CASQ1P31415 MTCYBP23-201ENST00000558717 1102 ntBASIC1.96□□□□□ -2.1
CASQ1P31415 AC005332.6-201ENST00000613178 446 ntBASIC1.96□□□□□ -2.1
CASQ1P31415 AC243773.3-201ENST00000613270 256 ntBASIC1.96□□□□□ -2.1
CASQ1P31415 AC010975.3-201ENST00000618727 978 ntBASIC1.96□□□□□ -2.1
CASQ1P31415 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.96□□□□□ -2.1
CASQ1P31415 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
CASQ1P31415 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
CASQ1P31415 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CASQ1P31415 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CASQ1P31415 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
CASQ1P31415 RPL7P27-201ENST00000403775 720 ntBASIC1.95□□□□□ -2.1
CASQ1P31415 RN7SKP32-201ENST00000410167 303 ntBASIC1.95□□□□□ -2.1
CASQ1P31415 RNU4-53P-201ENST00000410828 140 ntBASIC1.95□□□□□ -2.1
CASQ1P31415 OR9R1P-201ENST00000412200 877 ntBASIC1.95□□□□□ -2.1
CASQ1P31415 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.95□□□□□ -2.1
CASQ1P31415 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.95□□□□□ -2.1
CASQ1P31415 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.95□□□□□ -2.1
CASQ1P31415 MTND5P13-201ENST00000513046 1079 ntBASIC1.95□□□□□ -2.1
CASQ1P31415 SNORA25.11-201ENST00000515935 105 ntBASIC1.95□□□□□ -2.1
CASQ1P31415 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.95□□□□□ -2.1
CASQ1P31415 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC1.95□□□□□ -2.1
CASQ1P31415 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.95□□□□□ -2.1
CASQ1P31415 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.95□□□□□ -2.1
CASQ1P31415 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.95□□□□□ -2.1
CASQ1P31415 MIR3618-201ENST00000580330 88 ntBASIC1.95□□□□□ -2.1
CASQ1P31415 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.95□□□□□ -2.1
CASQ1P31415 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.95□□□□□ -2.1
CASQ1P31415 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.95□□□□□ -2.1
CASQ1P31415 AL157770.1-201ENST00000623049 439 ntBASIC1.95□□□□□ -2.1
CASQ1P31415 AC120349.2-201ENST00000625002 298 ntBASIC1.95□□□□□ -2.1
CASQ1P31415 Z99571.1-201ENST00000636677 394 ntBASIC1.95□□□□□ -2.1
CASQ1P31415 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CASQ1P31415 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
CASQ1P31415 SNORA5B-201ENST00000363786 132 ntBASIC1.94□□□□□ -2.1
CASQ1P31415 RNA5SP363-201ENST00000365072 115 ntBASIC1.94□□□□□ -2.1
CASQ1P31415 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
CASQ1P31415 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
CASQ1P31415 SNORA64-201ENST00000384674 134 ntBASIC1.94□□□□□ -2.1
CASQ1P31415 MIR934-201ENST00000401241 83 ntBASIC1.94□□□□□ -2.1
CASQ1P31415 AL590084.2-201ENST00000401481 382 ntBASIC1.94□□□□□ -2.1
CASQ1P31415 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.94□□□□□ -2.1
CASQ1P31415 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.94□□□□□ -2.1
CASQ1P31415 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CASQ1P31415 AL445646.1-201ENST00000431784 216 ntBASIC1.94□□□□□ -2.1
CASQ1P31415 AC010153.1-201ENST00000432862 727 ntBASIC1.94□□□□□ -2.1
CASQ1P31415 SEPT7P5-201ENST00000434048 306 ntBASIC1.94□□□□□ -2.1
CASQ1P31415 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.94□□□□□ -2.1
CASQ1P31415 AC004924.1-201ENST00000480160 781 ntBASIC1.94□□□□□ -2.1
CASQ1P31415 RPL21P99-201ENST00000480369 423 ntBASIC1.94□□□□□ -2.1
CASQ1P31415 AC104685.1-201ENST00000502445 371 ntBASIC1.94□□□□□ -2.1
CASQ1P31415 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
CASQ1P31415 SLC25A15P5-201ENST00000508033 253 ntBASIC1.94□□□□□ -2.1
CASQ1P31415 EIF4BP1-201ENST00000554881 351 ntBASIC1.94□□□□□ -2.1
CASQ1P31415 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
CASQ1P31415 AC092953.2-201ENST00000608000 699 ntBASIC1.94□□□□□ -2.1
CASQ1P31415 AC009237.15-201ENST00000610252 501 ntBASIC1.94□□□□□ -2.1
CASQ1P31415 TUG1_2.1-201ENST00000614234 87 ntBASIC1.94□□□□□ -2.1
CASQ1P31415 AL357080.1-201ENST00000617394 239 ntBASIC1.94□□□□□ -2.1
CASQ1P31415 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.94□□□□□ -2.1
CASQ1P31415 AC107982.1-201ENST00000507171 1300 ntBASIC1.93□□□□□ -2.1
CASQ1P31415 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CASQ1P31415 RNU6-223P-201ENST00000362830 107 ntBASIC1.93□□□□□ -2.1
CASQ1P31415 RNU6-97P-201ENST00000363387 104 ntBASIC1.93□□□□□ -2.1
CASQ1P31415 RNU6-658P-201ENST00000384606 106 ntBASIC1.93□□□□□ -2.1
CASQ1P31415 AC019129.1-201ENST00000403786 261 ntBASIC1.93□□□□□ -2.1
CASQ1P31415 POLHP1-201ENST00000411806 470 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 151.6 ms