Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.27□□□□□ -1.57
VARSP26640 AL133393.1-201ENST00000603277 287 ntBASIC5.27□□□□□ -1.57
VARSP26640 AC108738.1-201ENST00000603703 237 ntBASIC5.27□□□□□ -1.57
VARSP26640 AL645944.1-201ENST00000603857 493 ntBASIC5.27□□□□□ -1.57
VARSP26640 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
VARSP26640 AC131238.1-201ENST00000617135 328 ntBASIC5.27□□□□□ -1.57
VARSP26640 AC068870.2-201ENST00000620635 389 ntBASIC5.27□□□□□ -1.57
VARSP26640 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.27□□□□□ -1.57
VARSP26640 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VARSP26640 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VARSP26640 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VARSP26640 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.27□□□□□ -1.57
VARSP26640 AC010332.2-201ENST00000613083 1904 ntBASIC5.27□□□□□ -1.57
VARSP26640 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
VARSP26640 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VARSP26640 OR4G2P-202ENST00000641004 1759 ntBASIC5.27□□□□□ -1.57
VARSP26640 AL022322.2-201ENST00000624072 20397 ntBASIC5.27□□□□□ -1.57
VARSP26640 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
VARSP26640 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VARSP26640 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
VARSP26640 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
VARSP26640 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
VARSP26640 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
VARSP26640 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VARSP26640 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.26□□□□□ -1.57
VARSP26640 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.26□□□□□ -1.57
VARSP26640 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC5.26□□□□□ -1.57
VARSP26640 RNU6-211P-201ENST00000384047 107 ntBASIC5.26□□□□□ -1.57
VARSP26640 MIR34A-201ENST00000385130 110 ntBASIC5.26□□□□□ -1.57
VARSP26640 SNORA40-201ENST00000388090 126 ntBASIC5.26□□□□□ -1.57
VARSP26640 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
VARSP26640 AL357075.1-201ENST00000404107 726 ntBASIC5.26□□□□□ -1.57
VARSP26640 RPL7AP49-201ENST00000429522 581 ntBASIC5.26□□□□□ -1.57
VARSP26640 AL591438.1-201ENST00000433508 581 ntBASIC5.26□□□□□ -1.57
VARSP26640 AL512844.2-201ENST00000433990 593 ntBASIC5.26□□□□□ -1.57
VARSP26640 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.26□□□□□ -1.57
VARSP26640 snoU13.3-201ENST00000459441 104 ntBASIC5.26□□□□□ -1.57
VARSP26640 RNA5SP103-201ENST00000459503 118 ntBASIC5.26□□□□□ -1.57
VARSP26640 RN7SL727P-201ENST00000482164 296 ntBASIC5.26□□□□□ -1.57
VARSP26640 RN7SL547P-201ENST00000490793 290 ntBASIC5.26□□□□□ -1.57
VARSP26640 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.26□□□□□ -1.57
VARSP26640 RNU6-971P-201ENST00000516920 106 ntBASIC5.26□□□□□ -1.57
VARSP26640 RN7SKP234-201ENST00000517173 224 ntBASIC5.26□□□□□ -1.57
VARSP26640 TGIF1P1-201ENST00000558095 802 ntBASIC5.26□□□□□ -1.57
VARSP26640 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.26□□□□□ -1.57
VARSP26640 BPIFA4P-203ENST00000603168 689 ntBASIC5.26□□□□□ -1.57
VARSP26640 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC5.26□□□□□ -1.57
VARSP26640 AC005296.1-201ENST00000616145 209 ntBASIC5.26□□□□□ -1.57
VARSP26640 U73479.1-201ENST00000618062 168 ntBASIC5.26□□□□□ -1.57
VARSP26640 U4.7-201ENST00000638126 106 ntBASIC5.26□□□□□ -1.57
VARSP26640 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.26□□□□□ -1.57
VARSP26640 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
VARSP26640 AL031595.2-201ENST00000624215 19071 ntBASIC5.26□□□□□ -1.57
VARSP26640 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
VARSP26640 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VARSP26640 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
VARSP26640 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VARSP26640 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
VARSP26640 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VARSP26640 AC009812.4-201ENST00000569134 1805 ntBASIC5.25□□□□□ -1.57
VARSP26640 MUC2-202ENST00000613187 4845 ntBASIC5.25□□□□□ -1.57
VARSP26640 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VARSP26640 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VARSP26640 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
VARSP26640 Y_RNA.7-201ENST00000362352 102 ntBASIC5.25□□□□□ -1.57
VARSP26640 RNU6-961P-201ENST00000363893 105 ntBASIC5.25□□□□□ -1.57
VARSP26640 MIR153-2-201ENST00000385225 87 ntBASIC5.25□□□□□ -1.57
VARSP26640 RNU2-2P-201ENST00000410396 191 ntBASIC5.25□□□□□ -1.57
VARSP26640 RN7SKP125-201ENST00000410481 302 ntBASIC5.25□□□□□ -1.57
VARSP26640 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.25□□□□□ -1.57
VARSP26640 AL139148.1-201ENST00000427122 680 ntBASIC5.25□□□□□ -1.57
VARSP26640 WARS2P1-201ENST00000429678 537 ntBASIC5.25□□□□□ -1.57
VARSP26640 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VARSP26640 AC091179.1-201ENST00000461606 579 ntBASIC5.25□□□□□ -1.57
VARSP26640 RPS21P4-201ENST00000487122 248 ntBASIC5.25□□□□□ -1.57
VARSP26640 SNORA40.9-201ENST00000515895 93 ntBASIC5.25□□□□□ -1.57
VARSP26640 RNA5SP464-201ENST00000516251 108 ntBASIC5.25□□□□□ -1.57
VARSP26640 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
VARSP26640 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC5.25□□□□□ -1.57
VARSP26640 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.25□□□□□ -1.57
VARSP26640 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC5.25□□□□□ -1.57
VARSP26640 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VARSP26640 RNU2-4P-201ENST00000606190 192 ntBASIC5.25□□□□□ -1.57
VARSP26640 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC5.25□□□□□ -1.57
VARSP26640 U2.15-201ENST00000611544 191 ntBASIC5.25□□□□□ -1.57
VARSP26640 U2.16-201ENST00000613119 191 ntBASIC5.25□□□□□ -1.57
VARSP26640 U2.12-201ENST00000613778 191 ntBASIC5.25□□□□□ -1.57
VARSP26640 U2.9-201ENST00000615427 191 ntBASIC5.25□□□□□ -1.57
VARSP26640 U2.11-201ENST00000616345 191 ntBASIC5.25□□□□□ -1.57
VARSP26640 U2.2-201ENST00000616535 191 ntBASIC5.25□□□□□ -1.57
VARSP26640 U2.3-201ENST00000617785 191 ntBASIC5.25□□□□□ -1.57
VARSP26640 U2.19-201ENST00000618602 191 ntBASIC5.25□□□□□ -1.57
VARSP26640 RNU2-1-201ENST00000618664 191 ntBASIC5.25□□□□□ -1.57
VARSP26640 U2.6-201ENST00000619225 191 ntBASIC5.25□□□□□ -1.57
VARSP26640 U2.5-201ENST00000619465 191 ntBASIC5.25□□□□□ -1.57
VARSP26640 U2.10-201ENST00000620268 191 ntBASIC5.25□□□□□ -1.57
VARSP26640 Clostridiales-1.2-201ENST00000636724 160 ntBASIC5.25□□□□□ -1.57
VARSP26640 AL672167.1-205ENST00000641112 3080 ntBASIC5.25□□□□□ -1.57
VARSP26640 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VARSP26640 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms