Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 Y_RNA.339-201ENST00000365325 102 ntBASIC3.3□□□□□ -1.88
TNFRSF1BP20333 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TNFRSF1BP20333 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.3□□□□□ -1.88
TNFRSF1BP20333 RNU6-190P-201ENST00000384154 102 ntBASIC3.3□□□□□ -1.88
TNFRSF1BP20333 RNU6-1127P-201ENST00000384580 107 ntBASIC3.3□□□□□ -1.88
TNFRSF1BP20333 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
TNFRSF1BP20333 MIR548K-201ENST00000408406 116 ntBASIC3.3□□□□□ -1.88
TNFRSF1BP20333 U3.39-201ENST00000408569 239 ntBASIC3.3□□□□□ -1.88
TNFRSF1BP20333 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.3□□□□□ -1.88
TNFRSF1BP20333 AC074085.1-201ENST00000413598 418 ntBASIC3.3□□□□□ -1.88
TNFRSF1BP20333 AC017079.2-201ENST00000416102 485 ntBASIC3.3□□□□□ -1.88
TNFRSF1BP20333 DBIP2-201ENST00000419076 262 ntBASIC3.3□□□□□ -1.88
TNFRSF1BP20333 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.3□□□□□ -1.88
TNFRSF1BP20333 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.3□□□□□ -1.88
TNFRSF1BP20333 PPP1R11P2-201ENST00000423543 382 ntBASIC3.3□□□□□ -1.88
TNFRSF1BP20333 FAR2P4-202ENST00000425399 584 ntBASIC3.3□□□□□ -1.88
TNFRSF1BP20333 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.3□□□□□ -1.88
TNFRSF1BP20333 RPS29P7-201ENST00000439662 171 ntBASIC3.3□□□□□ -1.88
TNFRSF1BP20333 BRK1P2-201ENST00000442875 223 ntBASIC3.3□□□□□ -1.88
TNFRSF1BP20333 AC020550.1-201ENST00000447385 163 ntBASIC3.3□□□□□ -1.88
TNFRSF1BP20333 RPS15AP27-201ENST00000449183 343 ntBASIC3.3□□□□□ -1.88
TNFRSF1BP20333 SCARNA18-201ENST00000459004 134 ntBASIC3.3□□□□□ -1.88
TNFRSF1BP20333 VN1R17P-201ENST00000472048 1090 ntBASIC3.3□□□□□ -1.88
TNFRSF1BP20333 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.3□□□□□ -1.88
TNFRSF1BP20333 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.3□□□□□ -1.88
TNFRSF1BP20333 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.3□□□□□ -1.88
TNFRSF1BP20333 Y_RNA.682-201ENST00000516457 100 ntBASIC3.3□□□□□ -1.88
TNFRSF1BP20333 RNU4-60P-201ENST00000517239 135 ntBASIC3.3□□□□□ -1.88
TNFRSF1BP20333 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.3□□□□□ -1.88
TNFRSF1BP20333 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.3□□□□□ -1.88
TNFRSF1BP20333 AC090136.1-201ENST00000520009 240 ntBASIC3.3□□□□□ -1.88
TNFRSF1BP20333 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.3□□□□□ -1.88
TNFRSF1BP20333 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.3□□□□□ -1.88
TNFRSF1BP20333 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.3□□□□□ -1.88
TNFRSF1BP20333 AC026333.2-201ENST00000542164 106 ntBASIC3.3□□□□□ -1.88
TNFRSF1BP20333 AC011602.1-201ENST00000546484 331 ntBASIC3.3□□□□□ -1.88
TNFRSF1BP20333 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.3□□□□□ -1.88
TNFRSF1BP20333 TGIF1P1-201ENST00000558095 802 ntBASIC3.3□□□□□ -1.88
TNFRSF1BP20333 SNORD84-203ENST00000584275 78 ntBASIC3.3□□□□□ -1.88
TNFRSF1BP20333 MIR3942-201ENST00000585264 109 ntBASIC3.3□□□□□ -1.88
TNFRSF1BP20333 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.3□□□□□ -1.88
TNFRSF1BP20333 AC006116.10-201ENST00000591836 581 ntBASIC3.3□□□□□ -1.88
TNFRSF1BP20333 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.3□□□□□ -1.88
TNFRSF1BP20333 AC009570.1-201ENST00000609599 745 ntBASIC3.3□□□□□ -1.88
TNFRSF1BP20333 AC083809.1-201ENST00000615051 472 ntBASIC3.3□□□□□ -1.88
TNFRSF1BP20333 ZYXP1-201ENST00000617638 118 ntBASIC3.3□□□□□ -1.88
TNFRSF1BP20333 AC007792.1-201ENST00000623023 402 ntBASIC3.3□□□□□ -1.88
TNFRSF1BP20333 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
TNFRSF1BP20333 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
TNFRSF1BP20333 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TNFRSF1BP20333 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.29□□□□□ -1.88
TNFRSF1BP20333 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TNFRSF1BP20333 MTND5P3-201ENST00000438536 1800 ntBASIC3.29□□□□□ -1.88
TNFRSF1BP20333 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TNFRSF1BP20333 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.29□□□□□ -1.88
TNFRSF1BP20333 Y_RNA.128-201ENST00000363391 112 ntBASIC3.29□□□□□ -1.88
TNFRSF1BP20333 Y_RNA.212-201ENST00000364177 102 ntBASIC3.29□□□□□ -1.88
TNFRSF1BP20333 SNORA63C-201ENST00000364578 129 ntBASIC3.29□□□□□ -1.88
TNFRSF1BP20333 AC068538.1-201ENST00000376856 336 ntBASIC3.29□□□□□ -1.88
TNFRSF1BP20333 RNU6-43P-201ENST00000384302 107 ntBASIC3.29□□□□□ -1.88
TNFRSF1BP20333 MIR548P-201ENST00000408336 84 ntBASIC3.29□□□□□ -1.88
TNFRSF1BP20333 MIR548F5-201ENST00000408421 86 ntBASIC3.29□□□□□ -1.88
TNFRSF1BP20333 SSXP9-201ENST00000417503 292 ntBASIC3.29□□□□□ -1.88
TNFRSF1BP20333 AL159169.1-201ENST00000421119 127 ntBASIC3.29□□□□□ -1.88
TNFRSF1BP20333 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.29□□□□□ -1.88
TNFRSF1BP20333 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.29□□□□□ -1.88
TNFRSF1BP20333 HSFY6P-201ENST00000445573 403 ntBASIC3.29□□□□□ -1.88
TNFRSF1BP20333 AC104058.1-201ENST00000448028 297 ntBASIC3.29□□□□□ -1.88
TNFRSF1BP20333 AC009220.1-201ENST00000451614 275 ntBASIC3.29□□□□□ -1.88
TNFRSF1BP20333 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.29□□□□□ -1.88
TNFRSF1BP20333 AL133162.1-201ENST00000463228 453 ntBASIC3.29□□□□□ -1.88
TNFRSF1BP20333 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.29□□□□□ -1.88
TNFRSF1BP20333 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.29□□□□□ -1.88
TNFRSF1BP20333 RBBP4P6-201ENST00000508098 202 ntBASIC3.29□□□□□ -1.88
TNFRSF1BP20333 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.29□□□□□ -1.88
TNFRSF1BP20333 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.29□□□□□ -1.88
TNFRSF1BP20333 RNU6-123P-201ENST00000516163 102 ntBASIC3.29□□□□□ -1.88
TNFRSF1BP20333 SNORA70.18-201ENST00000516696 98 ntBASIC3.29□□□□□ -1.88
TNFRSF1BP20333 RNU6-256P-201ENST00000516747 97 ntBASIC3.29□□□□□ -1.88
TNFRSF1BP20333 RNU6-677P-201ENST00000516914 101 ntBASIC3.29□□□□□ -1.88
TNFRSF1BP20333 Y_RNA.718-201ENST00000517110 102 ntBASIC3.29□□□□□ -1.88
TNFRSF1BP20333 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.29□□□□□ -1.88
TNFRSF1BP20333 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.29□□□□□ -1.88
TNFRSF1BP20333 OR4H12P-201ENST00000556269 907 ntBASIC3.29□□□□□ -1.88
TNFRSF1BP20333 AC020661.2-201ENST00000560114 134 ntBASIC3.29□□□□□ -1.88
TNFRSF1BP20333 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.29□□□□□ -1.88
TNFRSF1BP20333 AC245389.1-201ENST00000605141 529 ntBASIC3.29□□□□□ -1.88
TNFRSF1BP20333 AL670379.4-201ENST00000605279 254 ntBASIC3.29□□□□□ -1.88
TNFRSF1BP20333 RNA5SP108-201ENST00000605921 117 ntBASIC3.29□□□□□ -1.88
TNFRSF1BP20333 U2.17-201ENST00000611454 95 ntBASIC3.29□□□□□ -1.88
TNFRSF1BP20333 MIR378J-201ENST00000611988 109 ntBASIC3.29□□□□□ -1.88
TNFRSF1BP20333 SDR42E1P2-201ENST00000614861 481 ntBASIC3.29□□□□□ -1.88
TNFRSF1BP20333 AL359547.2-201ENST00000615810 418 ntBASIC3.29□□□□□ -1.88
TNFRSF1BP20333 AC008121.3-201ENST00000618726 433 ntBASIC3.29□□□□□ -1.88
TNFRSF1BP20333 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TNFRSF1BP20333 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TNFRSF1BP20333 AC090337.1-201ENST00000579651 2074 ntBASIC3.29□□□□□ -1.88
TNFRSF1BP20333 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
TNFRSF1BP20333 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.29□□□□□ -1.88
TNFRSF1BP20333 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 199.3 ms