Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 RPL23AP49-201ENST00000492925 468 ntBASIC1.83□□□□□ -2.12
CD28P10747 RPS27AP10-201ENST00000496103 208 ntBASIC1.83□□□□□ -2.12
CD28P10747 AC026801.1-201ENST00000497178 464 ntBASIC1.83□□□□□ -2.12
CD28P10747 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.83□□□□□ -2.12
CD28P10747 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.83□□□□□ -2.12
CD28P10747 MTCYBP43-201ENST00000513621 740 ntBASIC1.83□□□□□ -2.12
CD28P10747 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.83□□□□□ -2.12
CD28P10747 AC007115.1-201ENST00000546853 234 ntBASIC1.83□□□□□ -2.12
CD28P10747 AC093012.1-202ENST00000549403 582 ntBASIC1.83□□□□□ -2.12
CD28P10747 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.83□□□□□ -2.12
CD28P10747 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.83□□□□□ -2.12
CD28P10747 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.83□□□□□ -2.12
CD28P10747 MIR544B-201ENST00000582372 78 ntBASIC1.83□□□□□ -2.12
CD28P10747 AC245884.10-201ENST00000597355 337 ntBASIC1.83□□□□□ -2.12
CD28P10747 AL136370.1-201ENST00000608166 691 ntBASIC1.83□□□□□ -2.12
CD28P10747 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.83□□□□□ -2.12
CD28P10747 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.83□□□□□ -2.12
CD28P10747 FO624990.1-201ENST00000636373 85 ntBASIC1.83□□□□□ -2.12
CD28P10747 ZNF271P-202ENST00000465539 1970 ntBASIC1.83□□□□□ -2.12
CD28P10747 AC093536.2-201ENST00000565257 1406 ntBASIC1.83□□□□□ -2.12
CD28P10747 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
CD28P10747 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
CD28P10747 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CD28P10747 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.82□□□□□ -2.12
CD28P10747 RPL21P132-201ENST00000331267 462 ntBASIC1.82□□□□□ -2.12
CD28P10747 FAM133CP-201ENST00000332869 704 ntBASIC1.82□□□□□ -2.12
CD28P10747 RNA5SP432-201ENST00000362480 116 ntBASIC1.82□□□□□ -2.12
CD28P10747 RNU6-1284P-201ENST00000363701 100 ntBASIC1.82□□□□□ -2.12
CD28P10747 RNU6-253P-201ENST00000384730 105 ntBASIC1.82□□□□□ -2.12
CD28P10747 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CD28P10747 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.82□□□□□ -2.12
CD28P10747 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CD28P10747 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.82□□□□□ -2.12
CD28P10747 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.82□□□□□ -2.12
CD28P10747 AC010153.1-201ENST00000432862 727 ntBASIC1.82□□□□□ -2.12
CD28P10747 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.82□□□□□ -2.12
CD28P10747 UBE2FP3-201ENST00000436366 524 ntBASIC1.82□□□□□ -2.12
CD28P10747 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.82□□□□□ -2.12
CD28P10747 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.82□□□□□ -2.12
CD28P10747 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.82□□□□□ -2.12
CD28P10747 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.82□□□□□ -2.12
CD28P10747 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.82□□□□□ -2.12
CD28P10747 FABP5P15-201ENST00000453566 214 ntBASIC1.82□□□□□ -2.12
CD28P10747 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.82□□□□□ -2.12
CD28P10747 snoU13.15-201ENST00000459407 104 ntBASIC1.82□□□□□ -2.12
CD28P10747 UBL5P3-201ENST00000475112 231 ntBASIC1.82□□□□□ -2.12
CD28P10747 RPS29P20-201ENST00000489592 171 ntBASIC1.82□□□□□ -2.12
CD28P10747 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CD28P10747 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.82□□□□□ -2.12
CD28P10747 AC092436.1-201ENST00000506450 503 ntBASIC1.82□□□□□ -2.12
CD28P10747 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CD28P10747 RNU5A-4P-201ENST00000516588 111 ntBASIC1.82□□□□□ -2.12
CD28P10747 RNA5SP290-201ENST00000517133 127 ntBASIC1.82□□□□□ -2.12
CD28P10747 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.82□□□□□ -2.12
CD28P10747 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.82□□□□□ -2.12
CD28P10747 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.82□□□□□ -2.12
CD28P10747 AC023050.2-201ENST00000544968 387 ntBASIC1.82□□□□□ -2.12
CD28P10747 MIR1273D-201ENST00000577266 86 ntBASIC1.82□□□□□ -2.12
CD28P10747 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.82□□□□□ -2.12
CD28P10747 MIR3616-201ENST00000584070 92 ntBASIC1.82□□□□□ -2.12
CD28P10747 MTCO2P2-201ENST00000591258 225 ntBASIC1.82□□□□□ -2.12
CD28P10747 AL161798.1-201ENST00000604630 131 ntBASIC1.82□□□□□ -2.12
CD28P10747 AC135507.1-201ENST00000607214 561 ntBASIC1.82□□□□□ -2.12
CD28P10747 AL589743.7-201ENST00000612637 233 ntBASIC1.82□□□□□ -2.12
CD28P10747 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.82□□□□□ -2.12
CD28P10747 AC013470.4-201ENST00000619978 986 ntBASIC1.82□□□□□ -2.12
CD28P10747 AC112204.3-201ENST00000623822 332 ntBASIC1.82□□□□□ -2.12
CD28P10747 AC010329.5-201ENST00000623497 2174 ntBASIC1.82□□□□□ -2.12
CD28P10747 AC016717.2-201ENST00000609089 5141 ntBASIC1.81□□□□□ -2.12
CD28P10747 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CD28P10747 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.81□□□□□ -2.12
CD28P10747 MTND5P6-201ENST00000422338 1798 ntBASIC1.81□□□□□ -2.12
CD28P10747 RNU6-1167P-201ENST00000363227 94 ntBASIC1.81□□□□□ -2.12
CD28P10747 SNORD113-6-201ENST00000363345 75 ntBASIC1.81□□□□□ -2.12
CD28P10747 RNA5SP88-201ENST00000365560 109 ntBASIC1.81□□□□□ -2.12
CD28P10747 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.81□□□□□ -2.12
CD28P10747 MIR504-201ENST00000385065 83 ntBASIC1.81□□□□□ -2.12
CD28P10747 TAS2R15P-201ENST00000390674 928 ntBASIC1.81□□□□□ -2.12
CD28P10747 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.81□□□□□ -2.12
CD28P10747 RPL26P27-201ENST00000414397 437 ntBASIC1.81□□□□□ -2.12
CD28P10747 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.81□□□□□ -2.12
CD28P10747 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.81□□□□□ -2.12
CD28P10747 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.81□□□□□ -2.12
CD28P10747 CR769776.1-201ENST00000441254 787 ntBASIC1.81□□□□□ -2.12
CD28P10747 AC009296.1-201ENST00000443146 155 ntBASIC1.81□□□□□ -2.12
CD28P10747 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.81□□□□□ -2.12
CD28P10747 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.81□□□□□ -2.12
CD28P10747 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.81□□□□□ -2.12
CD28P10747 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.81□□□□□ -2.12
CD28P10747 LINC00888-204ENST00000487386 421 ntBASIC1.81□□□□□ -2.12
CD28P10747 RPS15AP34-201ENST00000487776 387 ntBASIC1.81□□□□□ -2.12
CD28P10747 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.81□□□□□ -2.12
CD28P10747 RPS27P27-201ENST00000498779 255 ntBASIC1.81□□□□□ -2.12
CD28P10747 AC098591.2-201ENST00000510152 315 ntBASIC1.81□□□□□ -2.12
CD28P10747 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.81□□□□□ -2.12
CD28P10747 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.81□□□□□ -2.12
CD28P10747 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.81□□□□□ -2.12
CD28P10747 RNU5F-8P-201ENST00000515941 111 ntBASIC1.81□□□□□ -2.12
CD28P10747 RNU6-64P-201ENST00000517119 105 ntBASIC1.81□□□□□ -2.12
CD28P10747 RNU1-104P-201ENST00000517280 175 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms