Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.9□□□□□ -1.62
RARAP10276 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RARAP10276 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.9□□□□□ -1.62
RARAP10276 RNU1-20P-201ENST00000363314 162 ntBASIC4.9□□□□□ -1.63
RARAP10276 RNA5SP28-201ENST00000363841 119 ntBASIC4.9□□□□□ -1.63
RARAP10276 RN7SKP103-201ENST00000363848 320 ntBASIC4.9□□□□□ -1.63
RARAP10276 RPL21P75-201ENST00000396599 483 ntBASIC4.9□□□□□ -1.63
RARAP10276 RPL21P28-201ENST00000401418 483 ntBASIC4.9□□□□□ -1.63
RARAP10276 AL117339.3-201ENST00000418733 162 ntBASIC4.9□□□□□ -1.63
RARAP10276 AL590556.1-201ENST00000423231 483 ntBASIC4.9□□□□□ -1.63
RARAP10276 AL138785.1-201ENST00000425821 331 ntBASIC4.9□□□□□ -1.63
RARAP10276 MTCO3P29-201ENST00000432119 779 ntBASIC4.9□□□□□ -1.63
RARAP10276 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.9□□□□□ -1.63
RARAP10276 RPL21P11-201ENST00000461458 483 ntBASIC4.9□□□□□ -1.63
RARAP10276 RPL21P39-201ENST00000463605 483 ntBASIC4.9□□□□□ -1.63
RARAP10276 HSPE1P6-201ENST00000479457 291 ntBASIC4.9□□□□□ -1.63
RARAP10276 AC132942.1-201ENST00000486753 483 ntBASIC4.9□□□□□ -1.63
RARAP10276 AC093591.1-201ENST00000491435 481 ntBASIC4.9□□□□□ -1.63
RARAP10276 RPL21P16-201ENST00000495531 483 ntBASIC4.9□□□□□ -1.63
RARAP10276 AL359273.1-201ENST00000510918 627 ntBASIC4.9□□□□□ -1.63
RARAP10276 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.9□□□□□ -1.63
RARAP10276 RNA5SP360-201ENST00000516555 118 ntBASIC4.9□□□□□ -1.63
RARAP10276 RNU6-255P-201ENST00000516957 105 ntBASIC4.9□□□□□ -1.63
RARAP10276 RNU6-1212P-201ENST00000517023 104 ntBASIC4.9□□□□□ -1.63
RARAP10276 AC084851.1-201ENST00000529105 249 ntBASIC4.9□□□□□ -1.63
RARAP10276 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.9□□□□□ -1.63
RARAP10276 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.9□□□□□ -1.63
RARAP10276 AC044860.2-201ENST00000561005 179 ntBASIC4.9□□□□□ -1.63
RARAP10276 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.9□□□□□ -1.63
RARAP10276 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.9□□□□□ -1.63
RARAP10276 AP001005.3-201ENST00000622049 129 ntBASIC4.9□□□□□ -1.63
RARAP10276 ZFRP1-201ENST00000457579 2970 ntBASIC4.9□□□□□ -1.63
RARAP10276 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RARAP10276 AL136164.3-201ENST00000624429 3978 ntBASIC4.9□□□□□ -1.63
RARAP10276 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
RARAP10276 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
RARAP10276 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RARAP10276 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
RARAP10276 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RARAP10276 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RARAP10276 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RARAP10276 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.9□□□□□ -1.63
RARAP10276 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RARAP10276 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
RARAP10276 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.89□□□□□ -1.63
RARAP10276 AP001148.1-201ENST00000624124 2359 ntBASIC4.89□□□□□ -1.63
RARAP10276 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
RARAP10276 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RARAP10276 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RARAP10276 RNU5A-1-201ENST00000362698 116 ntBASIC4.89□□□□□ -1.63
RARAP10276 U3.6-201ENST00000363622 211 ntBASIC4.89□□□□□ -1.63
RARAP10276 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RARAP10276 MIR190B-201ENST00000401119 79 ntBASIC4.89□□□□□ -1.63
RARAP10276 MIR921-201ENST00000401133 56 ntBASIC4.89□□□□□ -1.63
RARAP10276 RPS29P13-201ENST00000402041 169 ntBASIC4.89□□□□□ -1.63
RARAP10276 HDGFP1-201ENST00000405943 252 ntBASIC4.89□□□□□ -1.63
RARAP10276 MTCYBP2-201ENST00000407745 171 ntBASIC4.89□□□□□ -1.63
RARAP10276 RNA5SP113-201ENST00000410486 84 ntBASIC4.89□□□□□ -1.63
RARAP10276 RNU6-1025P-201ENST00000410629 104 ntBASIC4.89□□□□□ -1.63
RARAP10276 Y_RNA.793-201ENST00000411222 111 ntBASIC4.89□□□□□ -1.63
RARAP10276 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.89□□□□□ -1.63
RARAP10276 BX679664.1-201ENST00000434429 253 ntBASIC4.89□□□□□ -1.63
RARAP10276 RPL23AP22-201ENST00000437556 453 ntBASIC4.89□□□□□ -1.63
RARAP10276 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.89□□□□□ -1.63
RARAP10276 Y_RNA.644-201ENST00000459006 113 ntBASIC4.89□□□□□ -1.63
RARAP10276 RN7SKP210-201ENST00000459176 261 ntBASIC4.89□□□□□ -1.63
RARAP10276 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RARAP10276 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.89□□□□□ -1.63
RARAP10276 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.89□□□□□ -1.63
RARAP10276 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.89□□□□□ -1.63
RARAP10276 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.89□□□□□ -1.63
RARAP10276 Y_RNA.674-201ENST00000516362 113 ntBASIC4.89□□□□□ -1.63
RARAP10276 Y_RNA.703-201ENST00000516846 111 ntBASIC4.89□□□□□ -1.63
RARAP10276 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.89□□□□□ -1.63
RARAP10276 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.89□□□□□ -1.63
RARAP10276 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.89□□□□□ -1.63
RARAP10276 ATP5J2P6-201ENST00000565203 266 ntBASIC4.89□□□□□ -1.63
RARAP10276 AL161798.1-201ENST00000604630 131 ntBASIC4.89□□□□□ -1.63
RARAP10276 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.89□□□□□ -1.63
RARAP10276 AL360181.4-201ENST00000621752 134 ntBASIC4.89□□□□□ -1.63
RARAP10276 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.89□□□□□ -1.63
RARAP10276 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.89□□□□□ -1.63
RARAP10276 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RARAP10276 AP000542.2-201ENST00000623199 6179 ntBASIC4.89□□□□□ -1.63
RARAP10276 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.89□□□□□ -1.63
RARAP10276 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
RARAP10276 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RARAP10276 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
RARAP10276 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.88□□□□□ -1.63
RARAP10276 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RARAP10276 AC026951.1-201ENST00000559530 2459 ntBASIC4.88□□□□□ -1.63
RARAP10276 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
RARAP10276 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RARAP10276 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RARAP10276 MIR412-201ENST00000362142 91 ntBASIC4.88□□□□□ -1.63
RARAP10276 Y_RNA.83-201ENST00000363005 113 ntBASIC4.88□□□□□ -1.63
RARAP10276 RNU6-1167P-201ENST00000363227 94 ntBASIC4.88□□□□□ -1.63
RARAP10276 RNU6-378P-201ENST00000384324 107 ntBASIC4.88□□□□□ -1.63
RARAP10276 Y_RNA.581-201ENST00000391017 97 ntBASIC4.88□□□□□ -1.63
RARAP10276 AL158156.1-201ENST00000422509 473 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms