Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 RPL7L1P8-201ENST00000469911 741 ntBASIC3.09□□□□□ -1.91
NKX2-2O95096 AC083798.1-201ENST00000472671 131 ntBASIC3.09□□□□□ -1.91
NKX2-2O95096 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.09□□□□□ -1.91
NKX2-2O95096 RPS15AP34-201ENST00000487776 387 ntBASIC3.09□□□□□ -1.91
NKX2-2O95096 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.09□□□□□ -1.91
NKX2-2O95096 SNORA40.12-201ENST00000516329 111 ntBASIC3.09□□□□□ -1.91
NKX2-2O95096 RNU6-314P-201ENST00000516574 104 ntBASIC3.09□□□□□ -1.91
NKX2-2O95096 IGKV2-23-201ENST00000518729 323 ntBASIC3.09□□□□□ -1.91
NKX2-2O95096 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
NKX2-2O95096 HMGB1P33-201ENST00000563485 527 ntBASIC3.09□□□□□ -1.91
NKX2-2O95096 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.09□□□□□ -1.91
NKX2-2O95096 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.09□□□□□ -1.91
NKX2-2O95096 AC015917.1-201ENST00000579654 510 ntBASIC3.09□□□□□ -1.91
NKX2-2O95096 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.09□□□□□ -1.91
NKX2-2O95096 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.09□□□□□ -1.91
NKX2-2O95096 DEFB131E-202ENST00000602581 683 ntBASIC3.09□□□□□ -1.91
NKX2-2O95096 AC245389.1-201ENST00000605141 529 ntBASIC3.09□□□□□ -1.91
NKX2-2O95096 AL158032.1-201ENST00000605401 106 ntBASIC3.09□□□□□ -1.91
NKX2-2O95096 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
NKX2-2O95096 MIR8058-201ENST00000615737 89 ntBASIC3.09□□□□□ -1.91
NKX2-2O95096 AL355365.1-201ENST00000616480 294 ntBASIC3.09□□□□□ -1.91
NKX2-2O95096 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
NKX2-2O95096 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
NKX2-2O95096 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.09□□□□□ -1.92
NKX2-2O95096 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.09□□□□□ -1.92
NKX2-2O95096 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.09□□□□□ -1.92
NKX2-2O95096 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NKX2-2O95096 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.08□□□□□ -1.92
NKX2-2O95096 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.08□□□□□ -1.92
NKX2-2O95096 RNU6-198P-201ENST00000384258 104 ntBASIC3.08□□□□□ -1.92
NKX2-2O95096 MIR449B-201ENST00000384995 97 ntBASIC3.08□□□□□ -1.92
NKX2-2O95096 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.08□□□□□ -1.92
NKX2-2O95096 Y_RNA.599-201ENST00000410489 109 ntBASIC3.08□□□□□ -1.92
NKX2-2O95096 MRPL50P2-201ENST00000416821 482 ntBASIC3.08□□□□□ -1.92
NKX2-2O95096 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.08□□□□□ -1.92
NKX2-2O95096 MTCO3P30-201ENST00000426425 670 ntBASIC3.08□□□□□ -1.92
NKX2-2O95096 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.08□□□□□ -1.92
NKX2-2O95096 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.08□□□□□ -1.92
NKX2-2O95096 AL606489.2-201ENST00000433886 234 ntBASIC3.08□□□□□ -1.92
NKX2-2O95096 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.08□□□□□ -1.92
NKX2-2O95096 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.08□□□□□ -1.92
NKX2-2O95096 HMGB3P8-201ENST00000449709 577 ntBASIC3.08□□□□□ -1.92
NKX2-2O95096 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.08□□□□□ -1.92
NKX2-2O95096 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.08□□□□□ -1.92
NKX2-2O95096 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.08□□□□□ -1.92
NKX2-2O95096 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.08□□□□□ -1.92
NKX2-2O95096 AC126182.1-201ENST00000478134 357 ntBASIC3.08□□□□□ -1.92
NKX2-2O95096 RN7SL293P-201ENST00000481765 281 ntBASIC3.08□□□□□ -1.92
NKX2-2O95096 AP002812.1-201ENST00000495378 474 ntBASIC3.08□□□□□ -1.92
NKX2-2O95096 AC092436.1-201ENST00000506450 503 ntBASIC3.08□□□□□ -1.92
NKX2-2O95096 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.08□□□□□ -1.92
NKX2-2O95096 RN7SKP219-201ENST00000516825 296 ntBASIC3.08□□□□□ -1.92
NKX2-2O95096 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.08□□□□□ -1.92
NKX2-2O95096 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.08□□□□□ -1.92
NKX2-2O95096 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.08□□□□□ -1.92
NKX2-2O95096 AP005435.4-201ENST00000529514 284 ntBASIC3.08□□□□□ -1.92
NKX2-2O95096 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.08□□□□□ -1.92
NKX2-2O95096 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.08□□□□□ -1.92
NKX2-2O95096 AL391261.3-201ENST00000557194 520 ntBASIC3.08□□□□□ -1.92
NKX2-2O95096 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.08□□□□□ -1.92
NKX2-2O95096 MIR1273C-201ENST00000578669 77 ntBASIC3.08□□□□□ -1.92
NKX2-2O95096 AC007621.1-201ENST00000604544 437 ntBASIC3.08□□□□□ -1.92
NKX2-2O95096 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.08□□□□□ -1.92
NKX2-2O95096 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.08□□□□□ -1.92
NKX2-2O95096 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NKX2-2O95096 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NKX2-2O95096 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NKX2-2O95096 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
NKX2-2O95096 TNPO1P3-201ENST00000436471 2662 ntBASIC3.07□□□□□ -1.92
NKX2-2O95096 AC006020.1-201ENST00000420179 1854 ntBASIC3.07□□□□□ -1.92
NKX2-2O95096 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
NKX2-2O95096 RNU1-70P-201ENST00000362618 164 ntBASIC3.07□□□□□ -1.92
NKX2-2O95096 RNU6-778P-201ENST00000363269 103 ntBASIC3.07□□□□□ -1.92
NKX2-2O95096 RNU6-884P-201ENST00000363889 107 ntBASIC3.07□□□□□ -1.92
NKX2-2O95096 RNU1-33P-201ENST00000364249 162 ntBASIC3.07□□□□□ -1.92
NKX2-2O95096 MIR490-201ENST00000384865 128 ntBASIC3.07□□□□□ -1.92
NKX2-2O95096 RNU6-550P-201ENST00000391057 101 ntBASIC3.07□□□□□ -1.92
NKX2-2O95096 UBE2V1P2-201ENST00000397758 440 ntBASIC3.07□□□□□ -1.92
NKX2-2O95096 RNU2-29P-201ENST00000410423 189 ntBASIC3.07□□□□□ -1.92
NKX2-2O95096 RNU4-46P-201ENST00000410818 138 ntBASIC3.07□□□□□ -1.92
NKX2-2O95096 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.07□□□□□ -1.92
NKX2-2O95096 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.07□□□□□ -1.92
NKX2-2O95096 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.07□□□□□ -1.92
NKX2-2O95096 AL158156.1-201ENST00000422509 473 ntBASIC3.07□□□□□ -1.92
NKX2-2O95096 RPL7P46-201ENST00000425129 740 ntBASIC3.07□□□□□ -1.92
NKX2-2O95096 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.07□□□□□ -1.92
NKX2-2O95096 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.07□□□□□ -1.92
NKX2-2O95096 NEK4P1-201ENST00000433383 879 ntBASIC3.07□□□□□ -1.92
NKX2-2O95096 AC005019.1-201ENST00000436455 431 ntBASIC3.07□□□□□ -1.92
NKX2-2O95096 AC016691.1-201ENST00000441321 413 ntBASIC3.07□□□□□ -1.92
NKX2-2O95096 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.07□□□□□ -1.92
NKX2-2O95096 AC104058.1-201ENST00000448028 297 ntBASIC3.07□□□□□ -1.92
NKX2-2O95096 AL118520.1-201ENST00000450770 291 ntBASIC3.07□□□□□ -1.92
NKX2-2O95096 HMGN1P18-201ENST00000457642 277 ntBASIC3.07□□□□□ -1.92
NKX2-2O95096 RPL21P8-201ENST00000465083 535 ntBASIC3.07□□□□□ -1.92
NKX2-2O95096 RPL36AP51-201ENST00000487216 318 ntBASIC3.07□□□□□ -1.92
NKX2-2O95096 EIF4EP3-201ENST00000498782 656 ntBASIC3.07□□□□□ -1.92
NKX2-2O95096 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.07□□□□□ -1.92
NKX2-2O95096 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
NKX2-2O95096 RNU6-1231P-201ENST00000517185 103 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms